BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: ee36ca00d059b28981a721ad847a1306.SwissProt.fasta
8 sequences; 4,611 total letters
Query= ACIAD2785
Length=589
Score E
Sequences producing significant alignments: (Bits) Value
Q7CGD8 Outer membrane transporter CdiB [Yersinia pestis] 304 2e-99
P0DMJ8 Outer membrane transporter CdiB-2 [Burkholderia pseudomall... 211 5e-64
E0SDG9 Outer membrane transporter CdiB [Dickeya dadantii (strain ... 174 5e-51
Q3YL97 Outer membrane transporter CdiB [Escherichia coli] 157 2e-44
Q0T962 Outer membrane transporter CdiB [Escherichia coli O6:K15:H... 157 2e-44
P16465 Hemolysin transporter protein HpmB [Proteus mirabilis] 137 5e-38
P35077 Filamentous hemagglutinin transporter protein FhaC [Bordet... 117 4e-31
B0UUL1 Outer membrane transporter protein IbpB [Histophilus somni... 107 6e-28
>Q7CGD8 Outer membrane transporter CdiB [Yersinia pestis]
Length=562
Score = 304 bits (778), Expect = 2e-99
Identities = 185/559 (33%), Positives = 295/559 (53%), Gaps = 36/559 (6%)
Query 38 IRQAQRLDELKKQLDEQDFIARPTKQT-----SELQLKHLVVQESPCVQIQQVQLDLTAS 92
++Q+ E ++ L+E+ +A PT S + + E+PC I ++++ +
Sbjct 32 VQQSIHQQERQRALEER--LAPPTPDVRLSAPSAFFSRIIFPLETPCFVINRIKI---SG 86
Query 93 PEPKQDQQRFQFILNKLTHPKKYSIVGQCIGTQSLQNILRYAQNELIKAGYITTQITAVP 152
EP Q I ++ GQC+G + + ++ QN L+ GY+TT++ A
Sbjct 87 AEPLPRWLPLQRIADQAQ--------GQCLGAKGINLLMSQMQNRLVDHGYVTTRVLAPQ 138
Query 153 QDLNQGTLLLKIYPGRLAKIIEPSQILSSRQLYTAFPIHSGDVLNIKALDQGLENLRRVS 212
QDLN GTL L + PG++ + L++AFP +G +L+++ ++QGLENL+RV
Sbjct 139 QDLNSGTLALNVVPGKIRGVELTPDSNRYVTLFSAFPARAGTLLDLRDIEQGLENLQRVP 198
Query 213 NLVIDMQIIPAQESGQQQAGYSDLQINVQPYRKWGASLNVDNSGSKSTGEYIGALGLSLN 272
+ +M +IP G+ +D+ +N Q + W + ++D+SG++STG Y G L L+
Sbjct 199 TVQANMVLIPGSAPGE-----TDIILNWQQRKMWRLAASLDDSGTRSTGRYQGGATLFLD 253
Query 273 NPLKLNDSLNLNLSHSLDDWEKDRNQSYYISYQMPFGYYDFGLSYNWYRYDQYVAGFNAP 332
NPL L+D ++ +L + Y +PFGY+ G++ + Y Y Q VAG N
Sbjct 254 NPLSLSDLFYVSAGGALQRRGDKGTNNLTGHYSLPFGYWTAGMTASRYDYYQAVAGLNGD 313
Query 333 IHYQGESEQTNLNFSRVISRDGQHKTSLYAKAYHKQNKNFIEDIEIEVQRRITTGWNLGI 392
I+Y+GESE SR++ R+ KT+ + +KN+I D E+EVQRR T+ W +G+
Sbjct 314 INYRGESENVAFQLSRLLHRNASQKTTFTYDVLTRSSKNYINDTEVEVQRRRTSAWRIGL 373
Query 393 QHRQYLGNAVLDASLDYRRGTGALNAQPAPEEQIKDANQNPLPSEGYARAPIWSADLRYT 452
QHR ++ A+LDA + Y+RGT A PA EE +A A + I + +
Sbjct 374 QHRHFISQAILDAGISYQRGTRWFGAIPAQEEYFGEAT---------ALSKILRLNAQLD 424
Query 453 QPFSILEQPVQYRLSWRGQYAPKILVPQDRFYIGGRYSVRGFDGELMLSGDNGHYLQQEI 512
PF ++ Q + Y L ++ Q L PQD+F IGGR+SVRGF+GE L D G +++ +I
Sbjct 425 IPFVVMAQNLHYNLQYQRQSTNTPLTPQDQFSIGGRWSVRGFNGERTLIADRGWWVRNDI 484
Query 513 SFNSPLPNTQFYTAIDQGWVNGRNS--IPGKRYLMGSVFGARYYYQRFYLDAFTGHGLVA 570
+ PLP + Y +D G V GR+ + G R+L GS G R D F G L
Sbjct 485 GWYLPLPGHELYVGVDYGEVGGRSGAYLLG-RHLAGSAVGVRGNVLNTRYDLFAGKPLSK 543
Query 571 PQHIKKEWVG-GFSLNYSY 588
P K + + GF+LN+ Y
Sbjct 544 PNGFKTDSLAVGFNLNWLY 562
>P0DMJ8 Outer membrane transporter CdiB-2 [Burkholderia pseudomallei
(strain 1026b)]
Length=584
Score = 211 bits (536), Expect = 5e-64
Identities = 147/490 (30%), Positives = 233/490 (48%), Gaps = 36/490 (7%)
Query 76 ESPCVQIQQVQLDLTAS-PEPKQDQ-------QRFQFILNKLTHPKKYSIVGQCIGTQSL 127
E+PC QI + LD+ S P + Q RF F + L H GQCIG Q +
Sbjct 77 ETPCFQIDRFALDVPDSLPAASKAQGASALPMDRFAFARDWLAH-----YAGQCIGKQGV 131
Query 128 QNILRYAQNELIKAGYITTQITAVPQDLNQGTLLLKIYPGRLAKI-IEPSQILSSRQLYT 186
I++ ++ GYITT++ QDL+ G L L + PG + + E ++L + + T
Sbjct 132 DLIVKGLSQAILARGYITTRVLVPEQDLSTGALKLALIPGVIRHVRFEDEKLLGTWK--T 189
Query 187 AFPIHSGDVLNIKALDQGLENLRRVSNLVIDMQIIPAQESGQQQAGYSDLQINVQPYRKW 246
AFP GDVLN++ ++QGLE ++RVS+ + M+I P G+ SD+ ++V+ + W
Sbjct 190 AFPTRDGDVLNLRDIEQGLEQMKRVSSQDVSMRIAPGDMPGE-----SDVVLDVKRGKPW 244
Query 247 GASLNVDNSGSKSTGEYIGALGLSLNNPLKLNDSLNLNLSHSLDDWEKD-RNQSYYISYQ 305
++DNSG+++TG+ G + L ++NPL LND N+ + L+ +K + + Y
Sbjct 245 TVVASIDNSGTRATGKLQGNVSLGIDNPLGLNDIFNVGFNQDLEFGDKRFGSHGWNAFYS 304
Query 306 MPFGYYDFGLSYNWYRYDQYVAGFNAPIHYQGESEQTNLNFSRVISRDGQHKTSLYAKAY 365
+P+GY+ LS Y Q +A N G + + +RV++R +
Sbjct 305 IPWGYWTGTLSAYTSTYFQPLAAVNQTFVASGNMKTVDFRLNRVLTRSRNDVLGAQVRLT 364
Query 366 HKQNKNFIEDIEIEVQRRITTGWNLGIQHRQYLGNAVLDASLDYRRGTGALNAQPAPEEQ 425
+ ++IE I + T G+ R Y G++ D SL YR+G G L +
Sbjct 365 RRFGDSYIEGTTIPSSHQNATFLEFGLNDRHYFGSSQFDGSLAYRQGLGWLGS------- 417
Query 426 IKDANQNPLPSEGYA--RAPIWSADLRYTQPFSILEQPVQYRLSWRGQYAPKILVPQDRF 483
+ +EG R + D + PF I QP +Y ++ GQY + D
Sbjct 418 ----TDSMFAAEGGQTYRFKMVVLDANLSTPFVIGTQPFKYVTTFHGQYTGNTVSYLDSV 473
Query 484 YIGGRYSVRGFDGELMLSGDNGHYLQQEISFNSPLPNTQFYTAIDQGWVNGRNSIP-GKR 542
IG RY+VRGFDGE +L+G G Y + E+ Y +D G V G +
Sbjct 474 TIGSRYTVRGFDGETLLAGSRGFYWRNELQVPVAQTGLSAYAGLDYGRVWGPEPVALVGT 533
Query 543 YLMGSVFGAR 552
L G+V G +
Sbjct 534 QLAGAVIGVK 543
>E0SDG9 Outer membrane transporter CdiB [Dickeya dadantii (strain
3937)]
Length=558
Score = 174 bits (442), Expect = 5e-51
Identities = 132/499 (26%), Positives = 225/499 (45%), Gaps = 46/499 (9%)
Query 36 EKIRQAQRLDELKKQLDEQDFIARPTKQTSELQLKHLVVQESPCVQIQQVQLDLTASPEP 95
E I Q+++ E +QL+ + + P K + LQ PC +++++ + +
Sbjct 42 EVIEQSRQQREALQQLN--NIVQAPLKADNALQ--------GPCFTLREIRFNHSTLLGQ 91
Query 96 KQDQQRFQFILNKLTHPKKYSIVGQCIGTQSLQNILRYAQNELIKAGYITTQITAVPQDL 155
+ LN+ C + + ++ N I+ GYIT++ QDL
Sbjct 92 RDQTALTAGYLNR------------CNNLEQINQLMHDVSNWYIQRGYITSRAFLSEQDL 139
Query 156 NQGTLLLKIYPGRLAKIIEPSQILSSRQLYTAFPIHSGDVLNIKALDQGLENLRRVSNLV 215
+ G L L+I GRL KI +Q + R TAFP G++LN++ ++QG+E + R+ +
Sbjct 140 SGGVLQLEILEGRLEKITINNQ--TERMTRTAFPAREGEILNLRDIEQGMEQMNRMPSQQ 197
Query 216 IDMQIIPAQESGQQQAGYSDLQINVQPYRKWGASLNVDNSGSKSTGEYIGALGLSLNNPL 275
+ ++I+P Q GYS + + + + + + DNSG KSTGE L+L+N
Sbjct 198 VTIEILPGS-----QPGYSVVNLTREAHLPFTGGVTFDNSGQKSTGEQQLNGSLALDNLF 252
Query 276 KLNDSLNLNLSHSLDDWEKDRNQSYYISYQMPFGYYDFGLSYNWYRYDQYVAGFNAPIHY 335
+ D ++ HS +S + MP+GY++ G SY+ RY + P H
Sbjct 253 GVADQWFISAGHSSRFATSHDAESLQAGFSMPYGYWNLGYSYSQSRYRNTFISRDFPWHS 312
Query 336 QGESEQTNLNFSRVISRDGQHKTSLYAKAYHKQNKNFIEDIEIEVQRRITTGWNLGIQHR 395
G+S+ L+ SRV+ R+G KT++ + N++ + R + +LG+ H
Sbjct 313 TGDSDTHRLSLSRVVFRNGTMKTAIVGMLSQRTGNNYLNGTLLPSSSRKLSSVSLGVNHS 372
Query 396 QYLGNAVLDASLDYRRGTGALNAQPAPEEQIKDANQNPLPSEGYARAPIWSADLRYTQPF 455
Q L + + Y RG L A+ ++ E A W+ Y P
Sbjct 373 QKLWGGLATFNPTYNRGVRWLGAETDTDKS---------ADEPRAEFNKWTLSASYYYP- 422
Query 456 SILEQPVQYRLSWRGQYAPKILVPQDRFYIGGRYSVRGFDGELMLSGDNGHYLQQEISFN 515
L + Y S GQY+ + L ++ +GG SVRGF E SG+ G Y + E+++
Sbjct 423 --LTDSITYLGSLYGQYSARALYGSEQMTLGGESSVRGF-REQYTSGNRGAYWRNELNWQ 479
Query 516 S----PLPNTQFYTAIDQG 530
+ L N F A+D G
Sbjct 480 AWQLPVLGNVTFMAAVDGG 498
>Q3YL97 Outer membrane transporter CdiB [Escherichia coli]
Length=588
Score = 157 bits (396), Expect = 2e-44
Identities = 146/549 (27%), Positives = 243/549 (44%), Gaps = 68/549 (12%)
Query 20 AEPLVKPSVGDDFALPEKIRQAQRLDELKKQLDEQDFIA----RPTKQTSELQLKHLVVQ 75
+ P S GD A+ ++ Q Q LDE ++Q D + A P+ +TS
Sbjct 49 SSPAAMLSPGDRSAIQQQ--QQQLLDENQRQRDALERSAPLTITPSPETS-------AGT 99
Query 76 ESPCVQIQQVQLD-LTASPEPKQDQQRFQFILNKLTHPKKYSIVGQCIGTQSLQNILRYA 134
E PC + + + T + D +L P V QC+ L +
Sbjct 100 EGPCFTVSSIVVSGATRLTSAETD---------RLVAPW----VNQCLNITGLTAVTDAM 146
Query 135 QNELIKAGYITTQITAVPQDLNQGTLLLKIYPGRLAKIIEPSQILSSRQLYTAFPIHSGD 194
+ I+ GYIT++ QDL+ G L + + GRL +I L +R L FP G
Sbjct 147 TDSYIRRGYITSRAFLTEQDLSGGVLHITVMEGRLQQIRAEGADLPARTLKMVFPGMEGK 206
Query 195 VLNIKALDQGLENLRRVSNLVIDMQIIPAQESGQQQAGYSDLQINVQPYRKWGASLNVDN 254
VLN++ ++QG+E + R+ + ++I P + G+S + + P S+ +DN
Sbjct 207 VLNLRDIEQGMEQINRLRTEPVQIEISPG-----DREGWSVVTLTALPEWPVTGSVGIDN 261
Query 255 SGSKSTGEYIGALG--LSLNNPLKLNDSLNLNLSHSLDDWEKDRNQSYYISYQMPFGYYD 312
SG KSTG G L LS NNPL L D+ ++ S D +++ +P+GY
Sbjct 262 SGQKSTG--TGQLNGVLSFNNPLGLADNWFVSGGRSSDFSVSHDARNFAAGVSLPYGYTL 319
Query 313 FGLSYNWYRYDQYVAGFNAPIHYQGESEQTNLNFSRVISRDGQHKTSLYAKAYHKQNKNF 372
+Y+W Y + G+ + L S V+ R+G KT+L H+ N+
Sbjct 320 VDYTYSWSDYLSTIDNRGWRWRSTGDLQTHRLGLSHVLFRNGDMKTALTGGLQHRIIHNY 379
Query 373 IEDIEIEVQRRITTGWNLGIQH-RQYLGNAVLDASLDYRRGTGALN-----AQPAPEEQI 426
++D+ ++ R T +++G+ H ++LG G G LN P +
Sbjct 380 LDDVLLQGSSRKLTSFSVGLNHTHKFLG------------GVGTLNPVFTRGMPWFGAES 427
Query 427 KDANQNPLPSEGYARAPIWSADLRYTQPFSILEQPVQYRLSWRGQYAPKILVPQDRFYIG 486
+ LP + + WS + +P + V + S Q++P L ++ +G
Sbjct 428 DHGKRGDLPVNQFRK---WSVSASFQRP---VTDRVWWLTSAYAQWSPDRLHGVEQLSLG 481
Query 487 GRYSVRGFDGELMLSGDNGHYLQQEIS---FNSPLPNT-QFYTAIDQGWVNGRNSIPGKR 542
G SVRGF + +SG+NG YL+ E+S F+ P T + A+D GW++ + P
Sbjct 482 GESSVRGFKDQ-YISGNNGGYLRNELSWSLFSLPYVGTVRAVAALDGGWLHSDSDDP--- 537
Query 543 YLMGSVFGA 551
Y G+++GA
Sbjct 538 YSSGTLWGA 546
Score = 18.9 bits (37), Expect = 4.9
Identities = 7/19 (37%), Positives = 11/19 (58%), Gaps = 0/19 (0%)
Query 210 RVSNLVIDMQIIPAQESGQ 228
R NL+ + ++P SGQ
Sbjct 4 RQDNLLANRTLLPGMASGQ 22
>Q0T962 Outer membrane transporter CdiB [Escherichia coli O6:K15:H31
(strain 536 / UPEC)]
Length=588
Score = 157 bits (396), Expect = 2e-44
Identities = 147/549 (27%), Positives = 242/549 (44%), Gaps = 68/549 (12%)
Query 20 AEPLVKPSVGDDFALPEKIRQAQRLDELKKQLDEQDFIA----RPTKQTSELQLKHLVVQ 75
+ P S GD A+ ++ Q Q LDE ++Q D + A P+ +TS
Sbjct 49 SSPAAMLSPGDRSAIQQQ--QQQLLDENQRQRDALERSAPLTITPSPETS-------AGT 99
Query 76 ESPCVQIQQVQLD-LTASPEPKQDQQRFQFILNKLTHPKKYSIVGQCIGTQSLQNILRYA 134
E PC + ++ + T + D +L P V QC+ L +
Sbjct 100 EGPCFTVSRIVVSGATRLTSAETD---------RLVAPW----VNQCLNITGLTAVTDAV 146
Query 135 QNELIKAGYITTQITAVPQDLNQGTLLLKIYPGRLAKIIEPSQILSSRQLYTAFPIHSGD 194
+ I+ GYIT++ QDL+ G L + + GRL +I L R L FP G
Sbjct 147 TDGYIRRGYITSRAFLTEQDLSGGVLHITVMEGRLQQIRAEGADLPGRTLKMVFPGMEGK 206
Query 195 VLNIKALDQGLENLRRVSNLVIDMQIIPAQESGQQQAGYSDLQINVQPYRKWGASLNVDN 254
VLN++ ++QG+E + R+ + ++I P + G+S + + P S+ +DN
Sbjct 207 VLNLRDIEQGMEQINRLRTESVQIEISPG-----DREGWSVVTLTALPEWPVTGSVGIDN 261
Query 255 SGSKSTGEYIGALG--LSLNNPLKLNDSLNLNLSHSLDDWEKDRNQSYYISYQMPFGYYD 312
SG K+TG G L LS NNPL L D+ + S D +++ +P+GY
Sbjct 262 SGQKNTG--TGQLNGVLSFNNPLGLADNWFVRGGRSSDFSVSHDARNFAAGVSLPYGYTL 319
Query 313 FGLSYNWYRYDQYVAGFNAPIHYQGESEQTNLNFSRVISRDGQHKTSLYAKAYHKQNKNF 372
+Y+W Y + G+ + L S V+ R+G KT+L H+ N+
Sbjct 320 VDYTYSWSDYLSTIDNRGWLWRSTGDLQTHRLGLSHVLFRNGNMKTALTGGLQHRIIHNY 379
Query 373 IEDIEIEVQRRITTGWNLGIQH-RQYLGNAVLDASLDYRRGTGALN-----AQPAPEEQI 426
++D+ ++ R T +++G+ H ++LG G G LN P +
Sbjct 380 LDDVLLQGSSRKLTSFSVGLNHTHKFLG------------GVGTLNPVFTRGMPWFGAES 427
Query 427 KDANQNPLPSEGYARAPIWSADLRYTQPFSILEQPVQYRLSWRGQYAPKILVPQDRFYIG 486
+ LP + + WS + +P + V + S Q++P L ++ +G
Sbjct 428 DHGKRGDLPVNQFRK---WSVSASFQRP---VTDRVWWLTSAYAQWSPDRLHGVEQLSLG 481
Query 487 GRYSVRGFDGELMLSGDNGHYLQQEIS---FNSPLPNT-QFYTAIDQGWVNGRNSIPGKR 542
G SVRGF E +SG+NG YL+ E+S F+ P T + TA+D GW++ P
Sbjct 482 GESSVRGFK-EQYISGNNGGYLRNELSWSLFSLPYVGTVRAVTALDGGWLHSDRDDP--- 537
Query 543 YLMGSVFGA 551
Y G+++GA
Sbjct 538 YSSGTLWGA 546
Score = 18.9 bits (37), Expect = 4.9
Identities = 7/19 (37%), Positives = 11/19 (58%), Gaps = 0/19 (0%)
Query 210 RVSNLVIDMQIIPAQESGQ 228
R NL+ + ++P SGQ
Sbjct 4 RQDNLLANRNLLPGMVSGQ 22
>P16465 Hemolysin transporter protein HpmB [Proteus mirabilis]
Length=561
Score = 137 bits (346), Expect = 5e-38
Identities = 112/452 (25%), Positives = 207/452 (46%), Gaps = 24/452 (5%)
Query 120 QCIGTQSLQNILRYAQNELIKAGYITTQITAVPQDLNQGTLLLKIYPGRLAKIIEPSQIL 179
QCI + + +++ ++ GYIT +I + + G L L G + +I + +
Sbjct 104 QCIKSADINRLVKELTQRYLQHGYITARIQFLRPN-QHGELGLYAIEGFVERIEGGDRGV 162
Query 180 SSRQLYTAFPIHSGDVLNIKALDQGLENLRRVSNLVIDMQIIPAQESGQQQAGYSDLQIN 239
++ L FP G L + LDQGL+ R+ + + + I+P E G S ++++
Sbjct 163 NTTLL---FPRIKGQPLKLATLDQGLDQANRLQSNKVTVDILPGTELGG-----SVIKLS 214
Query 240 VQPYRKWGASLNVDNSGSKSTGEYIGALGLSLNNPLKLNDSLNLNLSHSLDDWEKDRNQS 299
Q W ++ DN G K++G ++ SL++PL L+D ++LN + + D+ N++
Sbjct 215 NQRKSPWHLNIASDNYGQKNSGRWLIRTNASLDSPLGLSDFVSLNANITTDNPNTRFNRA 274
Query 300 YYISYQMPFGYYDFGL--SYNWYRYDQYVAGFNAPIHYQGESEQTNLNFSRVISRDGQHK 357
Y + Y +P+G + F SY+ Y++ Q + ++ G++ Q + SR +
Sbjct 275 YTLLYSIPYGGFTFSSFGSYSEYQFHQKLQ--TRTVNLYGDTTQVGIRGDYAFSRSQKQI 332
Query 358 TSLYAKAYHKQNKNFIEDIEIEVQRRITTGWNLGIQHRQYLGNAVLDASLDYRRGTGALN 417
+L + HK+ +N+ I +++ T LGI H Q + N VL +L + G
Sbjct 333 DTLNIQVTHKRIRNYFSQIRLDLSSPKLTTIELGINHLQIIPNGVLSTNLSVEKAVGWFG 392
Query 418 AQPAPEEQIKDANQNPLPSEGYARAPIWSADLRYTQPFSILEQPVQYRLSWRGQYAPKIL 477
A+ P I + N N + + +++ + Q FS+ + ++ GQY+ L
Sbjct 393 AEETP--YIANGNGN---DYRFTKVKLFT---NWYQRFSLWHSTFLFNSTFLGQYSHDTL 444
Query 478 VPQDRFYIGGRYSVRGFDGELMLSGDNGHYLQQEISFNSPLPNTQF--YTAIDQGWVNGR 535
+ + + ++RGFD + LSGDNG YL+ +S+ L + +D G V
Sbjct 445 PGVEWLSLTDKNAIRGFD-QSTLSGDNGGYLRNTLSYPYRLNHFSITPRIGVDIGQVKQH 503
Query 536 NSIPGKRYLMGSVFGARYYYQRFYLDAFTGHG 567
+ G + G G YQ+ LD G
Sbjct 504 GNYKGWQGGYGLSSGLNIQYQQAQLDLEVAKG 535
>P35077 Filamentous hemagglutinin transporter protein FhaC [Bordetella
pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)]
Length=584
Score = 117 bits (293), Expect = 4e-31
Identities = 99/383 (26%), Positives = 172/383 (45%), Gaps = 23/383 (6%)
Query 138 LIKAGYITTQITAVPQDLNQGTLLLKIYPGRLAK-IIEPSQILSSRQ---LYTAFPIHSG 193
L GY T+ +T VP + G L LK+ GR+ +I+ + +R +++A P
Sbjct 135 LYDRGYATSIVTFVPPGVVDGVLKLKVEWGRIKGWLIDGKPLEGTRDRMMVFSAMPGWQD 194
Query 194 DVLNIKALDQGLENLRRVSNLVIDMQIIPAQESGQQQAGYSDLQINVQPYRKWGASLNVD 253
VLN+ +DQ + N+ ++ I+PA E G YS L + +Q SL +D
Sbjct 195 KVLNVFDIDQAIYNINN-GGKTGNITIVPADEYG-----YSYLDLQLQRRALPRVSLGMD 248
Query 254 NSG--SKSTGEYIGALGLSLNNPLKLNDSLNLNLSHSL-DDWEKDRNQSYYISYQMPFGY 310
NSG + G Y ++ N+ L LND+L L + + D D ++Y + Y +P G
Sbjct 249 NSGPGTPENGRYKYNASVTANDLLGLNDTLGLYIGNRYYRDAGHDAERNYDLMYSVPLGR 308
Query 311 YDFGLSYNWYRYDQYVAGFNAPIHYQGESEQTNLNFSRVISRDGQHKTSLYAKAYHKQNK 370
L + Y + G S L +R++ RD + + S+Y +QNK
Sbjct 309 TRLDLQTGYSTYRNLLKTRYGQYQSAGNSRSFGLKATRLLYRDTRSQFSVYGGLKLRQNK 368
Query 371 NFIEDIEIEVQRRITTGWNLGIQHRQYLGNAVLDASLDYRRGTGALNAQPAPEEQIKDAN 430
N++ ++V + + +G+Q+ G L + RG G N + A A
Sbjct 369 NYLAGTRLDVSSKHYSDVTVGMQYSTQRGANAYFGDLSFTRGVGVNNGKYA-------AY 421
Query 431 QNPLPSEGYARAPIWSADLRYTQPFSILEQPVQYRLSWRGQYAPKILVPQDRFYIGGRYS 490
P +R ++ L +T+ ++ QP+Q+ QY+ + L+ + +G Y+
Sbjct 422 DERGPQGNVSR---FNGSLAWTRYMALAGQPIQWASQLGFQYSRQQLLNSYQITVGDEYT 478
Query 491 VRGFDGELMLSGDNGHYLQQEIS 513
VRG++ SGD+G YL ++
Sbjct 479 VRGYNLRTSQSGDSGVYLSNTLT 501
>B0UUL1 Outer membrane transporter protein IbpB [Histophilus somni
(strain 2336)]
Length=586
Score = 107 bits (268), Expect = 6e-28
Identities = 99/424 (23%), Positives = 171/424 (40%), Gaps = 28/424 (7%)
Query 138 LIKAGYITTQITAVPQDLNQGTLLLKIYPGRLAKIIEPSQ---ILSSRQLYTAFPIHSGD 194
L AGY+T+ I + G + + G++ I+ Q + + + P G
Sbjct 143 LYNAGYVTSAIGLKSSKIKNGEVEFVVLWGKVNDILVEEQQASLFKDKAMLFVLPNLKGK 202
Query 195 VLNIKALDQGLENLRRVSNLVIDMQIIPAQESGQQQAGYSDLQINVQPYRKWGASLNVDN 254
VL I +DQ +E L N + +I A E ++ + Y + SLN
Sbjct 203 VLRIYDVDQLIEILN-TGNKTAKVNVIAANEKSMSNLS---IERHRTSYPQVSLSLNNSG 258
Query 255 SGSKSTGEYIGALGLSLNNPLKLNDSLNLNLSHSL-DDWEKDRNQSYYISYQMPFGYYDF 313
GS + G L +S ++ L ND + + + + D + +R Q+Y +SY PF +
Sbjct 259 EGSNAEGRNQATLSISWSDLLGTNDRWSFSTGYRIYKDRQANRQQNYSLSYTQPFSFSTL 318
Query 314 GLSYNWYRYDQYVAGFNAPIHYQGESEQTNLNFSRVISRDGQHKTSLYAKAYHKQNKNFI 373
+ ++ Y + + G + GE++Q + S + R+ SLY + K+ ++
Sbjct 319 DIKLSYSGYKKQLRGIHTH-GSSGETKQASFKLSHTLLRNKDMILSLYGELEFKRRLSYF 377
Query 374 EDIEIEVQRRITTGWNLGIQHRQYLGNAVLDASLDYRRGTGALNAQPAPEEQIKDANQNP 433
DI I N+G+ + LG+ L + L Y G NA + +D
Sbjct 378 GDIRIGKYHN--NKLNIGLSYVTNLGHGKLYSDLSYSNGLRWFNANHSAYNSHRDKTLR- 434
Query 434 LPSEGYARAPIWSADLRYTQPFSILEQPVQYRLSWRGQYAPKILVPQDRFYIGGRYSVRG 493
+ S + + +PF + + Y+ QY L +++F IG Y+VRG
Sbjct 435 ----------LVSGSINWQRPFVFFNRGMSYQFRLGAQYGFDSLYGENQFSIGDEYTVRG 484
Query 494 FDGELMLSGDNGHYLQQEISF-----NSPLPNTQFYTAIDQGWVNGRNSIPGKRYLMGSV 548
F G SGD G Y+ Q ++ S L + ID G V+ + G
Sbjct 485 FKGGAG-SGDRGFYISQTVTIPFYPQKSYLSYINPFLGIDIGKVHAKRPHHVVDTFAGFA 543
Query 549 FGAR 552
FG +
Sbjct 544 FGVK 547
Lambda K H a alpha
0.319 0.137 0.409 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 2261214
Database: ee36ca00d059b28981a721ad847a1306.SwissProt.fasta
Posted date: May 20, 2024 1:46 AM
Number of letters in database: 4,611
Number of sequences in database: 8
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
