Comparative Genomics

ACIAD2849 / TrEMBL Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 30cc4c373c399674f734237276aee689.TrEMBL.fasta
           11 sequences; 850 total letters



Query= ACIAD2849

Length=83
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

A0A7G2SCM0 MFS transporter [Acinetobacter sp]                         166     8e-60
Q6F8N6 Uncharacterized protein [Acinetobacter baylyi (strain ATCC...  166     8e-60
A0A7T9UI82 MFS transporter [Acinetobacter ursingii]                   57.8    5e-17
A0A3A8F1Q7 Uncharacterized protein [Acinetobacter guerrae]            52.4    7e-15
A0A3R9C4I5 MFS transporter [Acinetobacter sp. FDAARGOS_515]           52.0    9e-15
A0A009YBC8 Putative membrane protein [Acinetobacter sp. 479375]       52.0    9e-15
A0A3D2SJM2 MFS transporter [Acinetobacter ursingii]                   50.8    3e-14
A0A3A8EXN4 Uncharacterized protein [Acinetobacter sp. WCHAc060007]    50.4    3e-14
N8P3S6 Uncharacterized protein [Acinetobacter bohemicus ANC 3994]     50.1    5e-14
A0A833PH45 Uncharacterized protein [Acinetobacter bereziniae]         47.0    8e-13
A0A4Q7AR03 Uncharacterized protein [Acinetobacter bouvetii]           46.2    2e-12


>A0A7G2SCM0 MFS transporter [Acinetobacter sp]
Length=82

 Score = 166 bits (419),  Expect = 8e-60
 Identities = 82/82 (100%), Positives = 82/82 (100%), Gaps = 0/82 (0%)

Query  1   MKKNIDSWTIKDRFIFGGLYALTGGILGWAIALFVAKYISSEWKPEIIIVLTVLFLFGLG  60
           MKKNIDSWTIKDRFIFGGLYALTGGILGWAIALFVAKYISSEWKPEIIIVLTVLFLFGLG
Sbjct  1   MKKNIDSWTIKDRFIFGGLYALTGGILGWAIALFVAKYISSEWKPEIIIVLTVLFLFGLG  60

Query  61  FLFPQLSRKTFSVIRRLFLFLS  82
           FLFPQLSRKTFSVIRRLFLFLS
Sbjct  61  FLFPQLSRKTFSVIRRLFLFLS  82


>Q6F8N6 Uncharacterized protein [Acinetobacter baylyi (strain 
ATCC 33305 / BD413 / ADP1)]
Length=82

 Score = 166 bits (419),  Expect = 8e-60
 Identities = 82/82 (100%), Positives = 82/82 (100%), Gaps = 0/82 (0%)

Query  1   MKKNIDSWTIKDRFIFGGLYALTGGILGWAIALFVAKYISSEWKPEIIIVLTVLFLFGLG  60
           MKKNIDSWTIKDRFIFGGLYALTGGILGWAIALFVAKYISSEWKPEIIIVLTVLFLFGLG
Sbjct  1   MKKNIDSWTIKDRFIFGGLYALTGGILGWAIALFVAKYISSEWKPEIIIVLTVLFLFGLG  60

Query  61  FLFPQLSRKTFSVIRRLFLFLS  82
           FLFPQLSRKTFSVIRRLFLFLS
Sbjct  61  FLFPQLSRKTFSVIRRLFLFLS  82


>A0A7T9UI82 MFS transporter [Acinetobacter ursingii]
Length=81

 Score = 57.8 bits (138),  Expect = 5e-17
 Identities = 29/80 (36%), Positives = 47/80 (59%), Gaps = 3/80 (4%)

Query  1   MKKNIDSWTIKDRFIFGGLYALTGGILGWAIALFVAKYISSEWKPEIIIVLTVLFLFGLG  60
           MKK ++ WT+ DRF+F G Y L G + G+ IAL +AKY+ + +    II++  L    +G
Sbjct  1   MKKRMEQWTLTDRFVFAGCYGLLGLVFGFLIALSMAKYLDTGFSSSTIILVISLTCTLMG  60

Query  61  FLFPQLSRKTFSVIRRLFLF  80
           F  P  + +    + RL+L+
Sbjct  61  FFAPDTASR---CLNRLWLW  77


>A0A3A8F1Q7 Uncharacterized protein [Acinetobacter guerrae]
Length=83

 Score = 52.4 bits (124),  Expect = 7e-15
 Identities = 28/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (4%)

Query  1   MKKNIDSWTIKDRFIFGGLYALTGGILGWAIALFVAKYISSEWKPEIIIVLTVLFLFGLG  60
           M+  I  WT  DR +F G Y   G +LG A A+FV+KY+ +++    +IV T L      
Sbjct  1   MRIKIARWTTIDRLVFAGCYGSLGLLLGLAAAVFVSKYVDTKFDSATVIVFTGLICVTTA  60

Query  61  FLFPQLSRKTFSVIRRLFLFL  81
           F+ P +    F   R+L+L++
Sbjct  61  FIAPNMMSLCF---RKLWLWI  78


>A0A3R9C4I5 MFS transporter [Acinetobacter sp. FDAARGOS_515]
Length=77

 Score = 52.0 bits (123),  Expect = 9e-15
 Identities = 26/76 (34%), Positives = 44/76 (58%), Gaps = 3/76 (4%)

Query  5   IDSWTIKDRFIFGGLYALTGGILGWAIALFVAKYISSEWKPEIIIVLTVLFLFGLGFLFP  64
           ++ WT+ DRF+F G Y L G + G+ IAL +AKY+ + +    II++  L    +GF  P
Sbjct  1   MEQWTLTDRFVFAGCYGLLGLVFGFLIALSMAKYLDTGFSSSTIILVISLTCTLMGFFAP  60

Query  65  QLSRKTFSVIRRLFLF  80
             + +    + RL+L+
Sbjct  61  DTASR---CLNRLWLW  73


>A0A009YBC8 Putative membrane protein [Acinetobacter sp. 479375]
Length=77

 Score = 52.0 bits (123),  Expect = 9e-15
 Identities = 26/76 (34%), Positives = 44/76 (58%), Gaps = 3/76 (4%)

Query  5   IDSWTIKDRFIFGGLYALTGGILGWAIALFVAKYISSEWKPEIIIVLTVLFLFGLGFLFP  64
           ++ WT+ DRF+F G Y L G + G+ IAL +AKY+ + +    II++  L    +GF  P
Sbjct  1   MEQWTLTDRFVFAGCYGLLGLVFGFLIALSMAKYLDTGFSSSTIILVISLTCTLMGFFAP  60

Query  65  QLSRKTFSVIRRLFLF  80
             + +    + RL+L+
Sbjct  61  DTASR---CLNRLWLW  73


>A0A3D2SJM2 MFS transporter [Acinetobacter ursingii]
Length=77

 Score = 50.8 bits (120),  Expect = 3e-14
 Identities = 26/76 (34%), Positives = 43/76 (57%), Gaps = 3/76 (4%)

Query  5   IDSWTIKDRFIFGGLYALTGGILGWAIALFVAKYISSEWKPEIIIVLTVLFLFGLGFLFP  64
           ++ WT+ DRF+F G Y L G   G+ IAL +AKY+ + +    II++  L    +GF  P
Sbjct  1   MEQWTLTDRFVFAGCYGLLGLFFGFLIALSMAKYLDTGFSSSTIILVISLTCTLMGFFAP  60

Query  65  QLSRKTFSVIRRLFLF  80
             + +    + RL+L+
Sbjct  61  DTASR---CLNRLWLW  73


>A0A3A8EXN4 Uncharacterized protein [Acinetobacter sp. WCHAc060007]
Length=72

 Score = 50.4 bits (119),  Expect = 3e-14
 Identities = 26/68 (38%), Positives = 40/68 (59%), Gaps = 0/68 (0%)

Query  12  DRFIFGGLYALTGGILGWAIALFVAKYISSEWKPEIIIVLTVLFLFGLGFLFPQLSRKTF  71
           +R I    YA+ G ILG+ IALF + Y+S+ +    II+ T++  F +G+LFP      F
Sbjct  4   ERLITAFYYAIDGIILGFGIALFTSFYLSTSFSSAKIILFTIISCFVIGYLFPHCISLLF  63

Query  72  SVIRRLFL  79
             I R+F+
Sbjct  64  KSIWRIFV  71


>N8P3S6 Uncharacterized protein [Acinetobacter bohemicus ANC 3994]
Length=73

 Score = 50.1 bits (118),  Expect = 5e-14
 Identities = 26/67 (39%), Positives = 38/67 (57%), Gaps = 0/67 (0%)

Query  12  DRFIFGGLYALTGGILGWAIALFVAKYISSEWKPEIIIVLTVLFLFGLGFLFPQLSRKTF  71
           DRFI    YA+ G +LG+ +AL+ + Y S E     I++ +V+  F +G+LFP      F
Sbjct  5   DRFIVAVYYAIGGVVLGFGVALYFSLYASLEIDSAQIVLSSVILCFAMGYLFPHAVGTLF  64

Query  72  SVIRRLF  78
             I RLF
Sbjct  65  KWIWRLF  71


>A0A833PH45 Uncharacterized protein [Acinetobacter bereziniae]
Length=73

 Score = 47.0 bits (110),  Expect = 8e-13
 Identities = 25/68 (37%), Positives = 39/68 (57%), Gaps = 0/68 (0%)

Query  12  DRFIFGGLYALTGGILGWAIALFVAKYISSEWKPEIIIVLTVLFLFGLGFLFPQLSRKTF  71
           +R I    Y++ G ILG  +A+F + YISS      I++ TV+  F +G+LFP L    F
Sbjct  5   ERLITAFYYSVGGIILGLGLAIFSSLYISSTISSSKIVIFTVISYFIIGYLFPHLVGNIF  64

Query  72  SVIRRLFL  79
             I ++F+
Sbjct  65  KWIWKIFV  72


>A0A4Q7AR03 Uncharacterized protein [Acinetobacter bouvetii]
Length=73

 Score = 46.2 bits (108),  Expect = 2e-12
 Identities = 24/68 (35%), Positives = 38/68 (56%), Gaps = 0/68 (0%)

Query  12  DRFIFGGLYALTGGILGWAIALFVAKYISSEWKPEIIIVLTVLFLFGLGFLFPQLSRKTF  71
           +R I    Y+  G ILG  +A+F + Y+SS      I++ TV+  F +G+LFP +    F
Sbjct  5   ERLITAFYYSFGGIILGLGLAIFSSLYLSSTISSPKIVIFTVICCFVIGYLFPNMVGNIF  64

Query  72  SVIRRLFL  79
             I R+F+
Sbjct  65  KWIWRIFV  72



Lambda      K        H        a         alpha
   0.340    0.154    0.500    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 37088


  Database: 30cc4c373c399674f734237276aee689.TrEMBL.fasta
    Posted date:  May 20, 2024  1:30 AM
  Number of letters in database: 850
  Number of sequences in database:  11



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40