BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eb0ba05fbd949f9faca1bf0ec7f2214e.SwissProt.fasta
14 sequences; 1,279 total letters
Query= ACIAD2926
Length=100
Score E
Sequences producing significant alignments: (Bits) Value
Q2SA36 UPF0250 protein HCH_05838 [Hahella chejuensis (strain KCTC... 63.2 1e-18
C1DMQ9 UPF0250 protein Avin_08440 [Azotobacter vinelandii (strain... 63.2 1e-18
Q8Y2K9 UPF0250 protein RSc0326 [Ralstonia nicotianae (strain GMI1... 63.2 2e-18
Q02SG5 UPF0250 protein PA14_12110 [Pseudomonas aeruginosa (strain... 61.2 8e-18
B7V8B5 UPF0250 protein PLES_09781 [Pseudomonas aeruginosa (strain... 61.2 8e-18
Q9X6V8 UPF0250 protein PA3998 [Pseudomonas aeruginosa (strain ATC... 61.2 8e-18
A6V0B2 UPF0250 protein PSPA7_1111 [Pseudomonas aeruginosa (strain... 61.2 8e-18
B1KDX1 UPF0250 protein Swoo_3713 [Shewanella woodyi (strain ATCC ... 60.1 2e-17
A4XYX5 UPF0250 protein Pmen_3793 [Pseudomonas mendocina (strain y... 59.7 3e-17
A6T343 UPF0250 protein mma_3250 [Janthinobacterium sp. (strain Ma... 58.5 9e-17
B2JC42 UPF0250 protein Bphy_0213 [Paraburkholderia phymatum (stra... 56.2 7e-16
A3QH58 UPF0250 protein Shew_2940 [Shewanella loihica (strain ATCC... 55.1 2e-15
Q87RQ9 UPF0250 protein VP0718 [Vibrio parahaemolyticus serotype O... 55.1 2e-15
P0A8J4 UPF0250 protein YbeD [Escherichia coli (strain K12)] 50.8 8e-14
>Q2SA36 UPF0250 protein HCH_05838 [Hahella chejuensis (strain
KCTC 2396)]
Length=91
Score = 63.2 bits (152), Expect = 1e-18
Identities = 32/79 (41%), Positives = 45/79 (57%), Gaps = 0/79 (0%)
Query 21 FPMDYPIKLIGDAGDELRIAVVDILQKHFPDFDAESIKIQPSRTGKYHSLTAQLRFDELE 80
FP DYP+K+IG AG + + V I++ H P+FDA SI SR GKY SL ++ E
Sbjct 13 FPCDYPLKVIGVAGPDFQEVVATIVRAHAPEFDASSIDALDSRNGKYLSLRFSIQAQSEE 72
Query 81 QVHALYADLAACPHIRTAL 99
+ L+ DL A ++ L
Sbjct 73 HIRRLFLDLKAHSAVQMVL 91
>C1DMQ9 UPF0250 protein Avin_08440 [Azotobacter vinelandii (strain
DJ / ATCC BAA-1303)]
Length=92
Score = 63.2 bits (152), Expect = 1e-18
Identities = 29/80 (36%), Positives = 51/80 (64%), Gaps = 1/80 (1%)
Query 21 FPMD-YPIKLIGDAGDELRIAVVDILQKHFPDFDAESIKIQPSRTGKYHSLTAQLRFDEL 79
FP + YPIK+IGDAG+ VV+++Q+H PD D+ +++++ SR G++ S+ + +
Sbjct 13 FPCERYPIKVIGDAGEGFADLVVEVIQRHAPDLDSSTLRLRDSRNGRFLSVQVLITATGV 72
Query 80 EQVHALYADLAACPHIRTAL 99
EQ+ A++ DL A + L
Sbjct 73 EQLQAIHLDLRATGRVHMVL 92
>Q8Y2K9 UPF0250 protein RSc0326 [Ralstonia nicotianae (strain
GMI1000)]
Length=97
Score = 63.2 bits (152), Expect = 2e-18
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 0/91 (0%)
Query 9 TPSRELREDLWVFPMDYPIKLIGDAGDELRIAVVDILQKHFPDFDAESIKIQPSRTGKYH 68
TP+ RE L +P D+PIK++G D+ +V ++Q+ P+F ++++PS G Y
Sbjct 7 TPATPPRESLIEYPSDFPIKVMGKMQDDFAETIVQLVQQFDPEFHTGRMEMRPSSGGNYL 66
Query 69 SLTAQLRFDELEQVHALYADLAACPHIRTAL 99
LT +R EQ+ ALY L A P ++ L
Sbjct 67 GLTVIVRATSREQLDALYRALTAHPMVKVVL 97
>Q02SG5 UPF0250 protein PA14_12110 [Pseudomonas aeruginosa (strain
UCBPP-PA14)]
Length=93
Score = 61.2 bits (147), Expect = 8e-18
Identities = 29/80 (36%), Positives = 50/80 (63%), Gaps = 1/80 (1%)
Query 21 FPMD-YPIKLIGDAGDELRIAVVDILQKHFPDFDAESIKIQPSRTGKYHSLTAQLRFDEL 79
FP + YPIK+IGDAG+ VV+I+Q+H PD D E++ ++ S G++ S+ + ++
Sbjct 14 FPCERYPIKVIGDAGEGFSDLVVEIIQRHAPDLDVETLVVRDSSKGRFLSVQVLITATDV 73
Query 80 EQVHALYADLAACPHIRTAL 99
+Q+ A++ DL A + L
Sbjct 74 DQLQAIHNDLRATGRVHMVL 93
>B7V8B5 UPF0250 protein PLES_09781 [Pseudomonas aeruginosa (strain
LESB58)]
Length=93
Score = 61.2 bits (147), Expect = 8e-18
Identities = 29/80 (36%), Positives = 50/80 (63%), Gaps = 1/80 (1%)
Query 21 FPMD-YPIKLIGDAGDELRIAVVDILQKHFPDFDAESIKIQPSRTGKYHSLTAQLRFDEL 79
FP + YPIK+IGDAG+ VV+I+Q+H PD D E++ ++ S G++ S+ + ++
Sbjct 14 FPCERYPIKVIGDAGEGFSDLVVEIIQRHAPDLDVETLVVRDSSKGRFLSVQVLITATDV 73
Query 80 EQVHALYADLAACPHIRTAL 99
+Q+ A++ DL A + L
Sbjct 74 DQLQAIHNDLRATGRVHMVL 93
>Q9X6V8 UPF0250 protein PA3998 [Pseudomonas aeruginosa (strain
ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228
/ 1C / PRS 101 / PAO1)]
Length=93
Score = 61.2 bits (147), Expect = 8e-18
Identities = 29/80 (36%), Positives = 50/80 (63%), Gaps = 1/80 (1%)
Query 21 FPMD-YPIKLIGDAGDELRIAVVDILQKHFPDFDAESIKIQPSRTGKYHSLTAQLRFDEL 79
FP + YPIK+IGDAG+ VV+I+Q+H PD D E++ ++ S G++ S+ + ++
Sbjct 14 FPCERYPIKVIGDAGEGFSDLVVEIIQRHAPDLDVETLVVRDSSKGRFLSVQVLITATDV 73
Query 80 EQVHALYADLAACPHIRTAL 99
+Q+ A++ DL A + L
Sbjct 74 DQLQAIHNDLRATGRVHMVL 93
>A6V0B2 UPF0250 protein PSPA7_1111 [Pseudomonas aeruginosa (strain
PA7)]
Length=93
Score = 61.2 bits (147), Expect = 8e-18
Identities = 29/80 (36%), Positives = 51/80 (64%), Gaps = 1/80 (1%)
Query 21 FPMD-YPIKLIGDAGDELRIAVVDILQKHFPDFDAESIKIQPSRTGKYHSLTAQLRFDEL 79
FP + YPIK+IGDAG+ VV+I+++H PD DAE++ ++ S G++ S+ + ++
Sbjct 14 FPCERYPIKVIGDAGEGFSDLVVEIIRRHAPDLDAETLVVRDSSKGRFLSVQVLITATDV 73
Query 80 EQVHALYADLAACPHIRTAL 99
+Q+ A++ DL A + L
Sbjct 74 DQLQAIHNDLRATGRVHMVL 93
>B1KDX1 UPF0250 protein Swoo_3713 [Shewanella woodyi (strain ATCC
51908 / MS32)]
Length=88
Score = 60.1 bits (144), Expect = 2e-17
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query 16 EDLWVFPMDYPIKLIGDAGDELRIAVVDILQKHFPDFDAESIKIQPSRTGKYHSLTAQLR 75
++L FP +P K++GDA + L VV ++QKH P S K+ S G Y+S+T ++
Sbjct 7 DELMEFPCSFPYKVVGDASETLADRVVAVVQKHVPGDYVPSSKV--SSKGTYNSITIRVT 64
Query 76 FDELEQVHALYADLAACPHIRTAL 99
EQV +LY DLAA ++ L
Sbjct 65 VQSKEQVESLYIDLAAIEGVKRVL 88
>A4XYX5 UPF0250 protein Pmen_3793 [Pseudomonas mendocina (strain
ymp)]
Length=92
Score = 59.7 bits (143), Expect = 3e-17
Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query 21 FPMD-YPIKLIGDAGDELRIAVVDILQKHFPDFDAESIKIQPSRTGKYHSLTAQLRFDEL 79
FP + YPIK+IG AG+ V++++Q+H PD DA ++ ++ SR G + S+ + +
Sbjct 13 FPCERYPIKVIGTAGEGFSDLVIEVIQRHAPDLDASTLVMRDSRNGNFLSVQVLITATSV 72
Query 80 EQVHALYADLAACPHIRTAL 99
EQ+ A++ DL A + L
Sbjct 73 EQLQAIHVDLRATGRVHMVL 92
>A6T343 UPF0250 protein mma_3250 [Janthinobacterium sp. (strain
Marseille)]
Length=91
Score = 58.5 bits (140), Expect = 9e-17
Identities = 30/84 (36%), Positives = 48/84 (57%), Gaps = 0/84 (0%)
Query 16 EDLWVFPMDYPIKLIGDAGDELRIAVVDILQKHFPDFDAESIKIQPSRTGKYHSLTAQLR 75
E L +P D+PIK++G A D+ ++D++ H P+F I+ +PS G Y SLT +R
Sbjct 8 ESLIEYPSDFPIKVMGLAHDQFVPTIIDVVVVHDPEFHEGRIEQRPSSAGNYLSLTVTVR 67
Query 76 FDELEQVHALYADLAACPHIRTAL 99
EQ+ LY L++ P ++ L
Sbjct 68 ATSREQLDNLYRALSSHPMVKYVL 91
>B2JC42 UPF0250 protein Bphy_0213 [Paraburkholderia phymatum (strain
DSM 17167 / CIP 108236 / LMG 21445 / STM815)]
Length=89
Score = 56.2 bits (134), Expect = 7e-16
Identities = 26/86 (30%), Positives = 48/86 (56%), Gaps = 0/86 (0%)
Query 14 LREDLWVFPMDYPIKLIGDAGDELRIAVVDILQKHFPDFDAESIKIQPSRTGKYHSLTAQ 73
+ E L FP D+PIK++G + + + +V+++++ FDAE ++++PS G Y LT
Sbjct 4 VNESLIDFPCDFPIKVMGKSHPDFQTTIVEVIRQFDGGFDAERVEVRPSSGGNYTGLTVT 63
Query 74 LRFDELEQVHALYADLAACPHIRTAL 99
+R E + +Y L P ++ L
Sbjct 64 VRALNREHLDDIYRALTGHPMVKVVL 89
>A3QH58 UPF0250 protein Shew_2940 [Shewanella loihica (strain
ATCC BAA-1088 / PV-4)]
Length=88
Score = 55.1 bits (131), Expect = 2e-15
Identities = 31/84 (37%), Positives = 47/84 (56%), Gaps = 4/84 (5%)
Query 17 DLWVFPMDYPIKLIGDAGDELRIAVVDILQKHFP-DFDAESIKIQPSRTGKYHSLTAQLR 75
+L FP +P K++GDA D L VV ++Q+H P D+ S + S G YHS+T ++
Sbjct 8 ELLDFPAAFPFKVVGDARDTLADDVVAVVQRHVPGDYMPTS---RASSKGSYHSITVKVT 64
Query 76 FDELEQVHALYADLAACPHIRTAL 99
EQ+ LY +LAA ++ L
Sbjct 65 VHSKEQIELLYIELAAIEGVKRVL 88
>Q87RQ9 UPF0250 protein VP0718 [Vibrio parahaemolyticus serotype
O3:K6 (strain RIMD 2210633)]
Length=92
Score = 55.1 bits (131), Expect = 2e-15
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 4/85 (5%)
Query 16 EDLWVFPMDYPIKLIGDAGDELRIAVVDILQKHFP-DFDAESIKIQPSRTGKYHSLTAQL 74
+DL FP + K++G A EL V++++Q+H P D+ S K++PS G YHS++ +
Sbjct 11 KDLLEFPCSFTYKVMGHAKPELPELVLEVIQRHAPGDY---SPKVKPSAKGNYHSVSINI 67
Query 75 RFDELEQVHALYADLAACPHIRTAL 99
+EQV LY +L +R L
Sbjct 68 TATSIEQVETLYKELGEIDIVRMVL 92
>P0A8J4 UPF0250 protein YbeD [Escherichia coli (strain K12)]
Length=87
Score = 50.8 bits (120), Expect = 8e-14
Identities = 28/83 (34%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query 17 DLWVFPMDYPIKLIGDAGDELRIAVVDILQKHFPDFDAESIKIQPSRTGKYHSLTAQLRF 76
+L FP + K++G A EL VV+++Q+H P ++K PS G YHS++ +
Sbjct 7 ELLEFPTPFTYKVMGQALPELVDQVVEVVQRHAPGDYTPTVK--PSSKGNYHSVSITINA 64
Query 77 DELEQVHALYADLAACPHIRTAL 99
+EQV LY +L +R L
Sbjct 65 THIEQVETLYEELGKIDIVRMVL 87
Lambda K H a alpha
0.329 0.143 0.438 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 67710
Database: eb0ba05fbd949f9faca1bf0ec7f2214e.SwissProt.fasta
Posted date: May 20, 2024 3:01 AM
Number of letters in database: 1,279
Number of sequences in database: 14
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
