BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 4c2cf333b48e8e751040ca28d990e94c.SwissProt.fasta
20 sequences; 3,765 total letters
Query= ACIAD2933
Length=160
Score E
Sequences producing significant alignments: (Bits) Value
C6X9I5 tRNA (cytidine(34)-2'-O)-methyltransferase [Methylovorus g... 182 3e-63
Q74Y93 tRNA (cytidine(34)-2'-O)-methyltransferase [Yersinia pestis] 174 6e-60
C7BSD3 tRNA (cytidine(34)-2'-O)-methyltransferase [Photorhabdus a... 169 4e-58
A0KEQ6 tRNA (cytidine(34)-2'-O)-methyltransferase [Aeromonas hydr... 168 1e-57
P44868 tRNA (cytidine(34)-2'-O)-methyltransferase [Haemophilus in... 165 2e-56
P0AGJ8 tRNA (cytidine(34)-2'-O)-methyltransferase [Escherichia co... 159 3e-54
P0AGJ7 tRNA (cytidine(34)-2'-O)-methyltransferase [Escherichia co... 159 3e-54
Q0BBL1 tRNA (cytidine(34)-2'-O)-methyltransferase [Burkholderia a... 157 2e-53
Q21LN7 tRNA (cytidine(34)-2'-O)-methyltransferase [Saccharophagus... 156 5e-53
A0KAS4 tRNA (cytidine(34)-2'-O)-methyltransferase [Burkholderia c... 155 1e-52
A3NR15 tRNA (cytidine(34)-2'-O)-methyltransferase [Burkholderia p... 153 6e-52
P32813 Putative tRNA (cytidine(34)-2'-O)-methyltransferase [Geoba... 133 5e-44
P69001 Putative tRNA (cytidine(34)-2'-O)-methyltransferase [Liste... 130 1e-42
Q06753 Putative TrmH family tRNA/rRNA methyltransferase YacO [Bac... 52.0 4e-12
Q5SM16 tRNA (guanosine(18)-2'-O)-methyltransferase [Thermus therm... 50.1 1e-11
Q72GI1 tRNA (guanosine(18)-2'-O)-methyltransferase [Thermus therm... 50.1 1e-11
Q9F5K6 23S rRNA (uridine(2479)-2'-O)-methyltransferase [Streptomy... 48.5 8e-11
P0AGJ2 tRNA (guanosine(18)-2'-O)-methyltransferase [Escherichia c... 47.8 1e-10
O67577 tRNA (guanosine(18)-2'-O)-methyltransferase [Aquifex aeoli... 46.2 4e-10
P0AGJ5 Uncharacterized tRNA/rRNA methyltransferase YfiF [Escheric... 44.7 2e-09
>C6X9I5 tRNA (cytidine(34)-2'-O)-methyltransferase [Methylovorus
glucosotrophus (strain SIP3-4)]
Length=154
Score = 182 bits (461), Expect = 3e-63
Identities = 89/152 (59%), Positives = 111/152 (73%), Gaps = 5/152 (3%)
Query 4 VVLFEPEIPANTGNIIRLCANTGAQLHLVKPLGFELDDKKLKRAGLDYHEYARMKIWDNI 63
+VL++PEIP NTGNIIRLCANTG +LHLVKPLGF L+DK+LKRAGLDYHEYA M++ +N
Sbjct 4 IVLYQPEIPPNTGNIIRLCANTGTRLHLVKPLGFSLEDKQLKRAGLDYHEYANMQVHENW 63
Query 64 EQCLESLKSQGISESDIFPLTTKGSATPHTVDLNRPVALLMGPETRGLPESVRFMFPQKN 123
E C +L + +F LTTKGSA T+ + GPETRGLPE +R F ++
Sbjct 64 EACCAALAGR-----RMFALTTKGSARHSTIAFQEGDVFVFGPETRGLPEEIRDQFTPEH 118
Query 124 WIRLPMAENSRSLNLSNATAVIVYEAWRQQGF 155
+RLPM N+RSLNLSN+ AV++YEAWRQ F
Sbjct 119 RVRLPMMPNNRSLNLSNSAAVLLYEAWRQHDF 150
>Q74Y93 tRNA (cytidine(34)-2'-O)-methyltransferase [Yersinia pestis]
Length=162
Score = 174 bits (440), Expect = 6e-60
Identities = 86/155 (55%), Positives = 109/155 (70%), Gaps = 0/155 (0%)
Query 1 VIHVVLFEPEIPANTGNIIRLCANTGAQLHLVKPLGFELDDKKLKRAGLDYHEYARMKIW 60
++++VLFEPEIP NTGNIIRLCANTG QLHL+KPLGF DDK+L+RAGLDYHE+A +K
Sbjct 1 MLNIVLFEPEIPPNTGNIIRLCANTGCQLHLIKPLGFTWDDKRLRRAGLDYHEFADIKHH 60
Query 61 DNIEQCLESLKSQGISESDIFPLTTKGSATPHTVDLNRPVALLMGPETRGLPESVRFMFP 120
+ + L+S K + +F LTTKG+ V LL GPETRGLP + P
Sbjct 61 HDYQAFLDSEKLDSTQPARLFALTTKGTPAHSAVSYQANDYLLFGPETRGLPAYILDALP 120
Query 121 QKNWIRLPMAENSRSLNLSNATAVIVYEAWRQQGF 155
+ IR+PM +SRS+NLSNA +V+VYEAWRQ G+
Sbjct 121 AQQKIRIPMQADSRSMNLSNAVSVVVYEAWRQLGY 155
>C7BSD3 tRNA (cytidine(34)-2'-O)-methyltransferase [Photorhabdus
asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77)]
Length=162
Score = 169 bits (428), Expect = 4e-58
Identities = 85/155 (55%), Positives = 109/155 (70%), Gaps = 0/155 (0%)
Query 1 VIHVVLFEPEIPANTGNIIRLCANTGAQLHLVKPLGFELDDKKLKRAGLDYHEYARMKIW 60
++++VLFEPEIP NTGNIIRLCANTG QLHL++PLGF DDK+L+RAGLDYHE+A +K
Sbjct 1 MLNIVLFEPEIPPNTGNIIRLCANTGFQLHLIQPLGFTWDDKRLRRAGLDYHEFANIKQH 60
Query 61 DNIEQCLESLKSQGISESDIFPLTTKGSATPHTVDLNRPVALLMGPETRGLPESVRFMFP 120
+ LE+ G S + +F LTTKG+ V L+ GPETRGLP V P
Sbjct 61 HDYHSFLENEGVTGESFARLFALTTKGTPAHSAVSYQAGDYLMFGPETRGLPSYVLDNMP 120
Query 121 QKNWIRLPMAENSRSLNLSNATAVIVYEAWRQQGF 155
+ IR+PM +SRS+NLSN+ AV+V+EAWRQ G+
Sbjct 121 PQQKIRIPMLADSRSMNLSNSVAVVVFEAWRQLGY 155
>A0KEQ6 tRNA (cytidine(34)-2'-O)-methyltransferase [Aeromonas
hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 /
BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240
/ NCTC 8049)]
Length=156
Score = 168 bits (425), Expect = 1e-57
Identities = 82/155 (53%), Positives = 108/155 (70%), Gaps = 5/155 (3%)
Query 1 VIHVVLFEPEIPANTGNIIRLCANTGAQLHLVKPLGFELDDKKLKRAGLDYHEYARMKIW 60
++ +VL++PEIP NTGNIIRLCANTG +LHL++PLGFE DDK++KRAGLDYHE+A +K W
Sbjct 1 MLDIVLYQPEIPPNTGNIIRLCANTGYRLHLIEPLGFEWDDKRVKRAGLDYHEFAEVKRW 60
Query 61 DNIEQCLESLKSQGISESDIFPLTTKGSATPHTVDLNRPVALLMGPETRGLPESVRFMFP 120
N E LE+ ++ + +F TTKG V ALL GPE+RGLP + P
Sbjct 61 PNFEAFLEA-----VAPTRVFACTTKGRTAHSAVQFAAGDALLFGPESRGLPIEIIESLP 115
Query 121 QKNWIRLPMAENSRSLNLSNATAVIVYEAWRQQGF 155
+ +R+PM SRS+NL+NA AV VYE+WRQ G+
Sbjct 116 FEQRLRIPMLPQSRSMNLANAVAVFVYESWRQLGY 150
>P44868 tRNA (cytidine(34)-2'-O)-methyltransferase [Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=160
Score = 165 bits (417), Expect = 2e-56
Identities = 84/156 (54%), Positives = 107/156 (69%), Gaps = 5/156 (3%)
Query 1 VIHVVLFEPEIPANTGNIIRLCANTGAQLHLVKPLGFELDDKKLKRAGLDYHEYARMKIW 60
++ +VL+EPEIP NTGNIIRLCANTG +LHL++PLGF DDK+L+R+GLDYHE+A +K
Sbjct 1 MLDIVLYEPEIPQNTGNIIRLCANTGFRLHLIEPLGFTWDDKRLRRSGLDYHEFAEIKRH 60
Query 61 DNIEQCLESLKSQGISESDIFPLTTKGSATPHTVDLNRPVALLMGPETRGLPESVRFMFP 120
E LES K + +F LTTKG V L+ GPETRG+P S+ P
Sbjct 61 KTFEAFLESEKPK-----RLFALTTKGCPAHSQVKFKLGDYLMFGPETRGIPMSILNEMP 115
Query 121 QKNWIRLPMAENSRSLNLSNATAVIVYEAWRQQGFQ 156
+ IR+PM NSRS+NLSN+ AV VYEAWRQ G++
Sbjct 116 MEQKIRIPMTANSRSMNLSNSVAVTVYEAWRQLGYK 151
>P0AGJ8 tRNA (cytidine(34)-2'-O)-methyltransferase [Escherichia
coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=157
Score = 159 bits (402), Expect = 3e-54
Identities = 79/155 (51%), Positives = 106/155 (68%), Gaps = 5/155 (3%)
Query 1 VIHVVLFEPEIPANTGNIIRLCANTGAQLHLVKPLGFELDDKKLKRAGLDYHEYARMKIW 60
++++VL+EPEIP NTGNIIRLCANTG +LH+++P+GF DDK+L+RAGLDYHE+ +
Sbjct 1 MLNIVLYEPEIPPNTGNIIRLCANTGFRLHIIEPMGFAWDDKRLRRAGLDYHEFTAVTRH 60
Query 61 DNIEQCLESLKSQGISESDIFPLTTKGSATPHTVDLNRPVALLMGPETRGLPESVRFMFP 120
+ LE+ Q +F LTTKG+ V L+ GPETRGLP S+ P
Sbjct 61 HDYRAFLEAENPQ-----RLFALTTKGTPAHSAVSYQDGDYLMFGPETRGLPASILDALP 115
Query 121 QKNWIRLPMAENSRSLNLSNATAVIVYEAWRQQGF 155
+ IR+PM +SRS+NLSNA +V+VYEAWRQ G+
Sbjct 116 AEQKIRIPMVPDSRSMNLSNAVSVVVYEAWRQLGY 150
>P0AGJ7 tRNA (cytidine(34)-2'-O)-methyltransferase [Escherichia
coli (strain K12)]
Length=157
Score = 159 bits (402), Expect = 3e-54
Identities = 79/155 (51%), Positives = 106/155 (68%), Gaps = 5/155 (3%)
Query 1 VIHVVLFEPEIPANTGNIIRLCANTGAQLHLVKPLGFELDDKKLKRAGLDYHEYARMKIW 60
++++VL+EPEIP NTGNIIRLCANTG +LH+++P+GF DDK+L+RAGLDYHE+ +
Sbjct 1 MLNIVLYEPEIPPNTGNIIRLCANTGFRLHIIEPMGFAWDDKRLRRAGLDYHEFTAVTRH 60
Query 61 DNIEQCLESLKSQGISESDIFPLTTKGSATPHTVDLNRPVALLMGPETRGLPESVRFMFP 120
+ LE+ Q +F LTTKG+ V L+ GPETRGLP S+ P
Sbjct 61 HDYRAFLEAENPQ-----RLFALTTKGTPAHSAVSYQDGDYLMFGPETRGLPASILDALP 115
Query 121 QKNWIRLPMAENSRSLNLSNATAVIVYEAWRQQGF 155
+ IR+PM +SRS+NLSNA +V+VYEAWRQ G+
Sbjct 116 AEQKIRIPMVPDSRSMNLSNAVSVVVYEAWRQLGY 150
>Q0BBL1 tRNA (cytidine(34)-2'-O)-methyltransferase [Burkholderia
ambifaria (strain ATCC BAA-244 / AMMD)]
Length=156
Score = 157 bits (396), Expect = 2e-53
Identities = 80/159 (50%), Positives = 104/159 (65%), Gaps = 9/159 (6%)
Query 1 VIHVVLFEPEIPANTGNIIRLCANTGAQLHLVKPLGFELDDKKLKRAGLDYHEYARMKI- 59
+ +V+L PEIP NTGN+IRLCANTGA+LHL++PLGF LDD K++RAGLDYHEYA M++
Sbjct 1 MFNVILVAPEIPPNTGNVIRLCANTGARLHLIEPLGFPLDDAKMRRAGLDYHEYAEMRVH 60
Query 60 --WDNIEQCLESLKSQGISESDIFPLTTKGSATPHTVDLNRPVALLMGPETRGLPESVRF 117
WD + ++ + +F TT+GS H + G ETRGLP V
Sbjct 61 RDWDAF------VAAEAPDPARMFAFTTRGSGRFHDHAFVPGDWFVFGSETRGLPADVLE 114
Query 118 MFPQKNWIRLPMAENSRSLNLSNATAVIVYEAWRQQGFQ 156
FP + +RLPM +RSLNLSN AV+V+EAWRQ GF+
Sbjct 115 RFPNEQRVRLPMRPGNRSLNLSNTVAVVVFEAWRQAGFE 153
>Q21LN7 tRNA (cytidine(34)-2'-O)-methyltransferase [Saccharophagus
degradans (strain 2-40 / ATCC 43961 / DSM 17024)]
Length=154
Score = 156 bits (394), Expect = 5e-53
Identities = 79/155 (51%), Positives = 106/155 (68%), Gaps = 5/155 (3%)
Query 1 VIHVVLFEPEIPANTGNIIRLCANTGAQLHLVKPLGFELDDKKLKRAGLDYHEYARMKIW 60
+ ++VLFEPEIP NTGNIIR+CANTG +LHL++PLGFELDDK+L+RAGLDY E+ +
Sbjct 1 MFNIVLFEPEIPPNTGNIIRVCANTGCRLHLIEPLGFELDDKRLRRAGLDYGEWQSVVTH 60
Query 61 DNIEQCLESLKSQGISESDIFPLTTKGSATPHTVDLNRPVALLMGPETRGLPESVRFMFP 120
N + ++ + ++ L+TKG+ H V + L+ GPETRGLP +
Sbjct 61 ANWDAFIKQQ-----APERLWALSTKGTKFHHEVSIGEGDYLVFGPETRGLPMEILEYIT 115
Query 121 QKNWIRLPMAENSRSLNLSNATAVIVYEAWRQQGF 155
N +R+PM NSRS+NLSNA +V+VYEAWRQ GF
Sbjct 116 FDNVLRIPMLPNSRSMNLSNAASVMVYEAWRQLGF 150
>A0KAS4 tRNA (cytidine(34)-2'-O)-methyltransferase [Burkholderia
cenocepacia (strain HI2424)]
Length=156
Score = 155 bits (391), Expect = 1e-52
Identities = 79/159 (50%), Positives = 105/159 (66%), Gaps = 9/159 (6%)
Query 1 VIHVVLFEPEIPANTGNIIRLCANTGAQLHLVKPLGFELDDKKLKRAGLDYHEYARMKI- 59
+ +VVL PEIP NTGN+IRLCANTGA LHL++PLGF LDD +++RAGLDYHEYA+M++
Sbjct 1 MFNVVLVAPEIPPNTGNVIRLCANTGAHLHLIEPLGFPLDDARMRRAGLDYHEYAQMRVH 60
Query 60 --WDNIEQCLESLKSQGISESDIFPLTTKGSATPHTVDLNRPVALLMGPETRGLPESVRF 117
WD + ++ + +F TT+GS H + G ETRGLP +
Sbjct 61 RDWDAF------VAAETPDPARMFAFTTRGSGRFHDHAFLSGDWFVFGSETRGLPAELLE 114
Query 118 MFPQKNWIRLPMAENSRSLNLSNATAVIVYEAWRQQGFQ 156
FP + +RLPM ++RSLNLSN AV+V+EAWRQ GF+
Sbjct 115 RFPNEQRVRLPMRPDNRSLNLSNTVAVVVFEAWRQAGFE 153
>A3NR15 tRNA (cytidine(34)-2'-O)-methyltransferase [Burkholderia
pseudomallei (strain 1106a)]
Length=156
Score = 153 bits (387), Expect = 6e-52
Identities = 79/159 (50%), Positives = 105/159 (66%), Gaps = 9/159 (6%)
Query 1 VIHVVLFEPEIPANTGNIIRLCANTGAQLHLVKPLGFELDDKKLKRAGLDYHEYARMKI- 59
+ +VVL EPEIP NTGN+IRLCANTGA+LHL++PLGF LDD K++RAGLDYHEYA+M++
Sbjct 1 MFNVVLVEPEIPPNTGNVIRLCANTGARLHLIEPLGFPLDDAKMRRAGLDYHEYAQMRVH 60
Query 60 --WDNIEQCLESLKSQGISESDIFPLTTKGSATPHTVDLNRPVALLMGPETRGLPESVRF 117
WD + ++ + +F TT+GS H + G ETRGL ++
Sbjct 61 RDWDAF------VAAEAPDPARMFAFTTRGSGRFHDRAFEPGDWFVFGAETRGLAPALVD 114
Query 118 MFPQKNWIRLPMAENSRSLNLSNATAVIVYEAWRQQGFQ 156
F + +RLPM +RSLNLSN AV+V+EAWRQ GF+
Sbjct 115 RFAPEQRVRLPMRPGNRSLNLSNTVAVVVFEAWRQAGFE 153
>P32813 Putative tRNA (cytidine(34)-2'-O)-methyltransferase [Geobacillus
stearothermophilus]
Length=157
Score = 133 bits (335), Expect = 5e-44
Identities = 71/161 (44%), Positives = 99/161 (61%), Gaps = 9/161 (6%)
Query 2 IHVVLFEPEIPANTGNIIRLCANTGAQLHLVKPLGFELDDKKLKRAGLDYHEYARMKIWD 61
+HVVLF+PEIPANTGNI R CA T LHL++PLGF DDK L+RAGLDY E+ + +D
Sbjct 3 LHVVLFQPEIPANTGNIARTCAATNTALHLIRPLGFSTDDKMLRRAGLDYWEFVNIHYYD 62
Query 62 NIEQCLESLKSQGISESDIFPLTTKGSATPHTVDLNRP---VALLMGPETRGLPESVRFM 118
+++ + ++ D + +T G + D + P + + G ET GLP+ +
Sbjct 63 SLDHFFQQNQN-----GDFYYITKFGKRYYTSYDFSDPSKEIFFIFGRETTGLPKEL-LA 116
Query 119 FPQKNWIRLPMAENSRSLNLSNATAVIVYEAWRQQGFQPLS 159
+ +R+PM EN R+LNLSN A++VYEA RQQ F LS
Sbjct 117 ENEDRCLRIPMTENVRALNLSNTAAILVYEALRQQSFHGLS 157
>P69001 Putative tRNA (cytidine(34)-2'-O)-methyltransferase [Listeria
innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)]
Length=169
Score = 130 bits (327), Expect = 1e-42
Identities = 71/159 (45%), Positives = 99/159 (62%), Gaps = 9/159 (6%)
Query 3 HVVLFEPEIPANTGNIIRLCANTGAQLHLVKPLGFELDDKKLKRAGLDYHEYARMKIWDN 62
H+VL++PEIPANTGNI R CA T LHL++PLGF DDK LKRAGLDY + ++ +D+
Sbjct 4 HIVLYQPEIPANTGNISRTCAGTDTYLHLIRPLGFSTDDKMLKRAGLDYWDNVKLSYYDS 63
Query 63 IEQCLESLKSQGISESDIFPLTTKGSATPHTVDL---NRPVALLMGPETRGLPESVRFMF 119
+++ E K+ G + + +T G VD N+ + G ET GLP+ +
Sbjct 64 LDEFFE--KNAG---GEFYYITKFGRHVYSDVDYSDPNKNYFFVFGKETTGLPDEL-LQA 117
Query 120 PQKNWIRLPMAENSRSLNLSNATAVIVYEAWRQQGFQPL 158
++N +R+PM ++ RSLNLSN AV+ YEA RQQ F L
Sbjct 118 NEENCLRIPMTDHIRSLNLSNTAAVLAYEALRQQSFGAL 156
>Q06753 Putative TrmH family tRNA/rRNA methyltransferase YacO
[Bacillus subtilis (strain 168)]
Length=249
Score = 52.0 bits (123), Expect = 4e-12
Identities = 46/159 (29%), Positives = 79/159 (50%), Gaps = 23/159 (14%)
Query 4 VVLFEPEIPANTGNIIRLCANTGAQLHLV---KPLGFELDDKKLKRAGLDYHEYARMKIW 60
++L E E P N G+I+R GA ++ + +G K +++ AR+
Sbjct 100 LILDELEDPHNLGSIMRTADAVGAHGIVIPKRRAVGLTTTVAKASTGAIEHIPVARVT-- 157
Query 61 DNIEQCLESLKSQGISESDIFPLTTKGSATP--HTVDLNRPVALLMGPETRGLPESVR-- 116
N+ + LE +K +GI + + T SA +D N P+AL++G E +G+ V+
Sbjct 158 -NLARTLEEMKERGI-----WVVGTDASAREDFRNMDGNMPLALVIGSEGKGMGRLVKEK 211
Query 117 --FMFPQKNWIRLPMAENSRSLNLSNATAVIVYEAWRQQ 153
F+ I+LPMA SLN S A +++YE +R++
Sbjct 212 CDFL------IKLPMAGKVTSLNASVAAGLLMYEVYRKR 244
>Q5SM16 tRNA (guanosine(18)-2'-O)-methyltransferase [Thermus thermophilus
(strain ATCC 27634 / DSM 579 / HB8)]
Length=194
Score = 50.1 bits (118), Expect = 1e-11
Identities = 41/152 (27%), Positives = 68/152 (45%), Gaps = 10/152 (7%)
Query 4 VVLFEPEIPANTGNIIRLCANTGA-QLHLVKPLGFELDDKKLKRAGLDYHEYARMKIWDN 62
V+L P N I+R C G + H V P G H++ +++ +
Sbjct 25 VLLENVHKPHNLSAILRTCDAVGVLEAHAVNPTG---GVPTFNETSGGSHKWVYLRVHPD 81
Query 63 IEQCLESLKSQGISESDIFPLTTKGSATP-HTVDLNRPVALLMGPETRGLPESVRFMFPQ 121
+ + LK +G + ++ + A VD +P A+L G E G+ E +
Sbjct 82 LHEAFRFLKERGFT---VYATALREDARDFREVDYTKPTAVLFGAEKWGVSEEALAL--A 136
Query 122 KNWIRLPMAENSRSLNLSNATAVIVYEAWRQQ 153
I++PM +SLN+S A AVI++EA RQ+
Sbjct 137 DGAIKIPMLGMVQSLNVSVAAAVILFEAQRQR 168
>Q72GI1 tRNA (guanosine(18)-2'-O)-methyltransferase [Thermus thermophilus
(strain ATCC BAA-163 / DSM 7039 / HB27)]
Length=194
Score = 50.1 bits (118), Expect = 1e-11
Identities = 41/152 (27%), Positives = 68/152 (45%), Gaps = 10/152 (7%)
Query 4 VVLFEPEIPANTGNIIRLCANTGA-QLHLVKPLGFELDDKKLKRAGLDYHEYARMKIWDN 62
V+L P N I+R C G + H V P G H++ +++ +
Sbjct 25 VLLENVHKPHNLSAILRTCDAVGVLEAHAVNPTG---GVPTFNETSGGSHKWVYLRVHPD 81
Query 63 IEQCLESLKSQGISESDIFPLTTKGSATP-HTVDLNRPVALLMGPETRGLPESVRFMFPQ 121
+ + LK +G + ++ + A VD +P A+L G E G+ E +
Sbjct 82 LHEAFRFLKERGFT---VYATALREDARDFREVDYTKPTAVLFGAEKWGVSEEALAL--A 136
Query 122 KNWIRLPMAENSRSLNLSNATAVIVYEAWRQQ 153
I++PM +SLN+S A AVI++EA RQ+
Sbjct 137 DGAIKIPMLGMVQSLNVSVAAAVILFEAQRQR 168
>Q9F5K6 23S rRNA (uridine(2479)-2'-O)-methyltransferase [Streptomyces
viridochromogenes]
Length=287
Score = 48.5 bits (114), Expect = 8e-11
Identities = 45/153 (29%), Positives = 70/153 (46%), Gaps = 7/153 (5%)
Query 5 VLFE-PEIPANTGNIIRLCANTGAQLHLVKPLGFELDDKKLKRAG---LDYHEYARMKIW 60
VLF+ P P N G+IIR GA +V ++ D K R+ L R+
Sbjct 129 VLFDRPTSPGNIGSIIRSADALGAHGLIVAGHAADVYDPKSVRSSTGSLFSLPAVRVPSP 188
Query 61 DNIEQCLESLKSQGISESDIFPLTTKGSATPHTVDLNRPVALLMGPETRGLPESVRFMFP 120
+ +E+ ++ G + + G D +P LL+G ET GL + R +
Sbjct 189 GEVMDWVEARRAAG-TPIVLVGTDEHGDCDVFDFDFTQPTLLLIGNETAGLSNAWRTLCD 247
Query 121 QKNWIRLPMAENSRSLNLSNATAVIVYEAWRQQ 153
+ +PMA ++ SLN +NA I+YEA RQ+
Sbjct 248 YT--VSIPMAGSASSLNAANAATAILYEAVRQR 278
>P0AGJ2 tRNA (guanosine(18)-2'-O)-methyltransferase [Escherichia
coli (strain K12)]
Length=229
Score = 47.8 bits (112), Expect = 1e-10
Identities = 43/144 (30%), Positives = 67/144 (47%), Gaps = 10/144 (7%)
Query 12 PANTGNIIRLCANTGA-QLHLVKPLGFELDDKKLKRAGLDYHEYARMKIWDNIEQCLESL 70
P N IIR G ++H V P G + + + A + + ++K I + L
Sbjct 30 PHNVSAIIRTADAVGVHEVHAVWP-GSRM--RTMASAAAGSNSWVQVKTHRTIGDAVAHL 86
Query 71 KSQGISESDIFPLTTKGSATP-HTVDLNRPVALLMGPETRGLPESVRFMFPQKNWIRLPM 129
K QG+ I +A +D RP +LMG E G+ + + Q I +PM
Sbjct 87 KGQGMQ---ILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQD--IIIPM 141
Query 130 AENSRSLNLSNATAVIVYEAWRQQ 153
+SLN+S A+A+I+YEA RQ+
Sbjct 142 IGMVQSLNVSVASALILYEAQRQR 165
>O67577 tRNA (guanosine(18)-2'-O)-methyltransferase [Aquifex aeolicus
(strain VF5)]
Length=211
Score = 46.2 bits (108), Expect = 4e-10
Identities = 43/143 (30%), Positives = 71/143 (50%), Gaps = 11/143 (8%)
Query 14 NTGNIIRLCANTGAQLHLVKPLGFELDDKKLK-RAGLDY--HEYARMKIWDNIEQCLESL 70
N I+R C G L+L + + KK K G+ H++ ++ DN Q L
Sbjct 38 NFSAIVRTCDAVGV-LYLYY---YHAEGKKAKINEGITQGSHKWVFIEKVDNPVQKLLEF 93
Query 71 KSQGISESDIFPLTTKGSATPHTVDLNRPVALLMGPETRGLPESVRFMFPQKNWIRLPMA 130
K++G + +K S VD +P L++G E +G+ + + +K I +PM
Sbjct 94 KNRGFQI--VATWLSKESVNFREVDYTKPTVLVVGNELQGVSPEIVEIADKK--IVIPMY 149
Query 131 ENSRSLNLSNATAVIVYEAWRQQ 153
++SLN+S AT +I+YEA RQ+
Sbjct 150 GMAQSLNVSVATGIILYEAQRQR 172
>P0AGJ5 Uncharacterized tRNA/rRNA methyltransferase YfiF [Escherichia
coli (strain K12)]
Length=345
Score = 44.7 bits (104), Expect = 2e-09
Identities = 36/141 (26%), Positives = 63/141 (45%), Gaps = 6/141 (4%)
Query 12 PANTGNIIRLCANTGAQLHLVKPLGFELDDKKLKRAGLDYHEYARMKIWDNIEQCLESLK 71
P N G ++R CA+ G + +V+ L+ R E+ + DNI L+ +
Sbjct 208 PHNLGGMMRSCAHFGVKGVVVQDAAL-LESGAAIRTAEGGAEHVQPITGDNIVNVLDDFR 266
Query 72 SQGISESDIFPLTTKGSATPHTVDLNRPVALLMGPETRGLPESVRFMFPQKNWIRLPMAE 131
G + + +++ L + L++G E GLP++ R P +++
Sbjct 267 QAGYT---VVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARD--PNDLRVKIDGTG 321
Query 132 NSRSLNLSNATAVIVYEAWRQ 152
N LN+S AT V++ E WRQ
Sbjct 322 NVAGLNISVATGVLLGEWWRQ 342
Lambda K H a alpha
0.323 0.138 0.422 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 366610
Database: 4c2cf333b48e8e751040ca28d990e94c.SwissProt.fasta
Posted date: May 20, 2024 1:02 PM
Number of letters in database: 3,765
Number of sequences in database: 20
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
