BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 42703363de98d00367373a0fbaedd59e.SwissProt.fasta
15 sequences; 7,120 total letters
Query= ACIAD2945
Length=485
Score E
Sequences producing significant alignments: (Bits) Value
Q51487 Outer membrane protein OprM [Pseudomonas aeruginosa (strai... 350 2e-119
Q9KJC1 Antibiotic efflux pump outer membrane protein ArpC [Pseudo... 331 5e-112
P0C071 Multidrug/solvent efflux pump outer membrane protein MepC ... 330 1e-111
Q88N32 Probable efflux pump outer membrane protein TtgC [Pseudomo... 330 1e-111
Q9WWZ8 Toluene efflux pump outer membrane protein TtgC [Pseudomon... 330 2e-111
O31101 Solvent efflux pump outer membrane protein SrpC [Pseudomon... 326 3e-110
Q93PU3 Toluene efflux pump outer membrane protein TtgI [Pseudomon... 326 3e-110
Q9KWV3 Toluene efflux pump outer membrane protein TtgF [Pseudomon... 308 5e-103
Q849R1 Probable efflux pump outer membrane protein SepC [Pseudomo... 308 5e-103
Q8CWA4 Cation efflux system protein CusC [Escherichia coli O6:H1 ... 289 4e-96
P77211 Cation efflux system protein CusC [Escherichia coli (strai... 286 5e-95
Q8XBY3 Cation efflux system protein CusC [Escherichia coli O157:H7] 286 6e-95
Q9ZHD2 Probable outer membrane lipoprotein SilC [Salmonella typhi... 280 1e-92
Q51397 Outer membrane protein OprJ [Pseudomonas aeruginosa (strai... 276 5e-91
P15727 Nodulation protein T [Rhizobium leguminosarum bv. viciae] 154 1e-44
>Q51487 Outer membrane protein OprM [Pseudomonas aeruginosa (strain
ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG
12228 / 1C / PRS 101 / PAO1)]
Length=485
Score = 350 bits (898), Expect = 2e-119
Identities = 204/467 (44%), Positives = 288/467 (62%), Gaps = 12/467 (3%)
Query 12 SIAVSALALA-LAACQSMRGPEPVVKADIPTSYTYN----ASGQSIAEQGYKDFFSDPRL 66
S+AV+A+ L+ + + PE V A P Y A+ A+ G+++FF DP+L
Sbjct 7 SLAVAAVVLSGCSLIPDYQRPEAPVAAAYPQGQAYGQNTGAAAVPAADIGWREFFRDPQL 66
Query 67 LQVIELALNNNRDLRTAALNIQRAQQQYQITENNQLPTIGASGSAIRQ-----VSITRDP 121
Q+I +AL NNRDLR AALN++ + QY+I + P IG GS RQ +S T P
Sbjct 67 QQLIGVALENNRDLRVAALNVEAFRAQYRIQRADLFPRIGVDGSGTRQRLPGDLSTTGSP 126
Query 122 NNPYSTFQVGLGVTAYELDFWGRVRSLKDAALDNYLATQSTRDTTQISLVSQVAQAWLSY 181
S + V LG TA+ELD +GR+RSL+D AL+ YLAT+ + + Q +LV+ VA A+L+
Sbjct 127 AIS-SQYGVTLGTTAWELDLFGRLRSLRDQALEQYLATEQAQRSAQTTLVASVATAYLTL 185
Query 182 SFAVANLKLADQTLKAQLDSYNLNKKRFDVGIDSEVPLRQAQISVETARNDVANYKTQIV 241
A L+L TL S++L ++ +DVG+ S + LRQAQ +VE AR +A Y +
Sbjct 186 KADQAQLQLTKDTLGTYQKSFDLTQRSYDVGVASALDLRQAQTAVEGARATLAQYTRLVA 245
Query 242 QAQNLLNLLVGQSVPQNLLPNQPVKSITRQNVFSTGLPSDLLNNRPDVKSAEYQLSAAGA 301
Q QN L LL+G +P NL P T GLPSDLL RPD+ AE+QL AA A
Sbjct 246 QDQNALVLLLGSGIPANL-PQGLGLDQTLLTEVPAGLPSDLLQRRPDILEAEHQLMAANA 304
Query 302 NIGAAKAALFPTISLTGSAGYASTQLSDLFKSGAGVWSIGPSLELPIFDWGTRRANIKIS 361
+IGAA+AA FP+ISLT +AG S QLS LF +G+G W PS+ LPIF G+ RA++ +
Sbjct 305 SIGAARAAFFPSISLTANAGTMSRQLSGLFDAGSGSWLFQPSINLPIFTAGSLRASLDYA 364
Query 362 ETDQKIALSNYEKSIQSAFREVNDALATRANIGDRISAQRRLVDATNTTYSLSNARFRAG 421
+ + I ++ YEK+IQ+AF+EV D LA R +++ AQR LV A++ Y L++ R+R G
Sbjct 365 KIQKDINVAQYEKAIQTAFQEVADGLAARGTFTEQLQAQRDLVKASDEYYQLADKRYRTG 424
Query 422 IDNYLTVLDAQRTSYSAEQGLLLLEQANLNNQIELYKTLGGGLKANT 468
+DNYLT+LDAQR+ ++A+Q L+ L +++ LYK LGGG T
Sbjct 425 VDNYLTLLDAQRSLFTAQQQLITDRLNQLTSEVNLYKALGGGWNQQT 471
Score = 21.2 bits (43), Expect = 1.2
Identities = 11/33 (33%), Positives = 17/33 (52%), Gaps = 0/33 (0%)
Query 11 RSIAVSALALALAACQSMRGPEPVVKADIPTSY 43
RS+ AL LA Q+ R + + A + T+Y
Sbjct 150 RSLRDQALEQYLATEQAQRSAQTTLVASVATAY 182
>Q9KJC1 Antibiotic efflux pump outer membrane protein ArpC [Pseudomonas
putida]
Length=484
Score = 331 bits (848), Expect = 5e-112
Identities = 192/464 (41%), Positives = 280/464 (60%), Gaps = 17/464 (4%)
Query 12 SIAVSALALA-LAACQSMRGPEPVVKADIPTSYTYN---ASGQSIAEQGYKDFFSDPRLL 67
S+AV+A L + + PE V A P Y+ ++ + AEQG++ FF DP L
Sbjct 7 SLAVTAFILGGCSLIPDYQAPEAPVAAQWPQGPAYSPTQSADVAAAEQGWRQFFHDPALQ 66
Query 68 QVIELALNNNRDLRTAALNIQRAQQQYQITENNQLPTIGASGSAIRQVSITRDPNNPYST 127
Q+I+ +L NNRDLR AALN+ + QY+I + P + A+GS RQ R P N T
Sbjct 67 QLIQTSLVNNRDLRVAALNLDAYRAQYRIQRADLFPAVSATGSGSRQ----RVPANMSQT 122
Query 128 FQVG--------LGVTAYELDFWGRVRSLKDAALDNYLATQSTRDTTQISLVSQVAQAWL 179
+ G LGV+AYELD +GRVRSL + AL+ YL+++ R +TQI+LV+ VA A+
Sbjct 123 GESGITSQYSATLGVSAYELDLFGRVRSLTEQALETYLSSEQARRSTQIALVASVANAYY 182
Query 180 SYSFAVANLKLADQTLKAQLDSYNLNKKRFDVGIDSEVPLRQAQISVETARNDVANYKTQ 239
++ A KL ++TLK +SYNL ++ +VG+ S + + QA+ +VE AR + Y+
Sbjct 183 TWQADQALFKLTEETLKTYEESYNLTRRSNEVGVASALDVSQARTAVEGARVKYSQYQRL 242
Query 240 IVQAQNLLNLLVGQSVPQNLLPNQPVKSITRQNVFSTGLPSDLLNNRPDVKSAEYQLSAA 299
+ Q N L +L+G +P +L + + V GLPSD+L RPD++ AE+ L AA
Sbjct 243 VAQDVNSLTVLLGTGIPADLAKPLELDADQLAEV-PAGLPSDILQRRPDIQEAEHLLKAA 301
Query 300 GANIGAAKAALFPTISLTGSAGYASTQLSDLFKSGAGVWSIGPSLELPIFDWGTRRANIK 359
ANIGAA+AA FP+ISLT +AG S + LF G G W P + LPIF+ G+ +A++
Sbjct 302 NANIGAARAAFFPSISLTANAGSLSPDMGHLFSGGQGTWLFQPQINLPIFNAGSLKASLD 361
Query 360 ISETDQKIALSNYEKSIQSAFREVNDALATRANIGDRISAQRRLVDATNTTYSLSNARFR 419
S+ + I ++ YEK+IQ+AF+EV+D LA R +++ AQR LV A Y L+ R+R
Sbjct 362 YSKIQKDINVAKYEKTIQTAFQEVSDGLAARKTFEEQLQAQRDLVQANQDYYRLAERRYR 421
Query 420 AGIDNYLTVLDAQRTSYSAEQGLLLLEQANLNNQIELYKTLGGG 463
GID+ LT LDAQR +SA+Q L+ + L +++ LYK LGGG
Sbjct 422 IGIDSNLTFLDAQRNLFSAQQALIGDRLSQLTSEVNLYKALGGG 465
>P0C071 Multidrug/solvent efflux pump outer membrane protein MepC
[Pseudomonas putida]
Length=484
Score = 330 bits (846), Expect = 1e-111
Identities = 192/464 (41%), Positives = 280/464 (60%), Gaps = 17/464 (4%)
Query 12 SIAVSALALA-LAACQSMRGPEPVVKADIPTSYTYN---ASGQSIAEQGYKDFFSDPRLL 67
S+AV+A L + + PE V A P Y+ ++ + AEQG++ FF DP L
Sbjct 7 SLAVTAFILGGCSLIPDYQTPEAPVAAQWPQGPAYSPTQSADVAAAEQGWRQFFHDPALQ 66
Query 68 QVIELALNNNRDLRTAALNIQRAQQQYQITENNQLPTIGASGSAIRQVSITRDPNNPYST 127
Q+I+ +L NNRDLR AALN+ + QY+I + P + A+GS RQ R P N T
Sbjct 67 QLIQTSLVNNRDLRVAALNLDAYRAQYRIQRADLFPAVSATGSGSRQ----RVPANMSQT 122
Query 128 FQVG--------LGVTAYELDFWGRVRSLKDAALDNYLATQSTRDTTQISLVSQVAQAWL 179
+ G LGV+AYELD +GRVRSL + AL+ YL+++ R +TQI+LV+ VA A+
Sbjct 123 GESGITSQYSATLGVSAYELDLFGRVRSLTEQALETYLSSEQARRSTQIALVASVANAYY 182
Query 180 SYSFAVANLKLADQTLKAQLDSYNLNKKRFDVGIDSEVPLRQAQISVETARNDVANYKTQ 239
++ A KL ++TLK +SYNL ++ +VG+ S + + QA+ +VE AR + Y+
Sbjct 183 TWQADQALFKLTEETLKTYEESYNLTRRSNEVGVASALDVSQARTAVEGARVKYSQYQRL 242
Query 240 IVQAQNLLNLLVGQSVPQNLLPNQPVKSITRQNVFSTGLPSDLLNNRPDVKSAEYQLSAA 299
+ Q N L +L+G +P +L + + V GLPSD+L RPD++ AE+ L AA
Sbjct 243 VAQDVNSLTVLLGTGIPADLAKPLELDADQLAEV-PAGLPSDILQRRPDIQEAEHLLKAA 301
Query 300 GANIGAAKAALFPTISLTGSAGYASTQLSDLFKSGAGVWSIGPSLELPIFDWGTRRANIK 359
ANIGAA+AA FP+ISLT +AG S + LF G G W P + LPIF+ G+ +A++
Sbjct 302 NANIGAARAAFFPSISLTANAGSLSPDMGHLFSGGQGTWLFQPQINLPIFNAGSLKASLD 361
Query 360 ISETDQKIALSNYEKSIQSAFREVNDALATRANIGDRISAQRRLVDATNTTYSLSNARFR 419
S+ + I ++ YEK+IQ+AF+EV+D LA R +++ AQR LV A Y L+ R+R
Sbjct 362 YSKIQKDINVAKYEKTIQTAFQEVSDGLAARKTFEEQLQAQRDLVQANQDYYRLAERRYR 421
Query 420 AGIDNYLTVLDAQRTSYSAEQGLLLLEQANLNNQIELYKTLGGG 463
GID+ LT LDAQR +SA+Q L+ + L +++ LYK LGGG
Sbjct 422 IGIDSNLTFLDAQRNLFSAQQALIGDRLSQLTSEVNLYKALGGG 465
>Q88N32 Probable efflux pump outer membrane protein TtgC [Pseudomonas
putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB
11950 / KT2440)]
Length=484
Score = 330 bits (846), Expect = 1e-111
Identities = 192/464 (41%), Positives = 280/464 (60%), Gaps = 17/464 (4%)
Query 12 SIAVSALALA-LAACQSMRGPEPVVKADIPTSYTYN---ASGQSIAEQGYKDFFSDPRLL 67
S+AV+A L + + PE V A P Y+ ++ + AEQG++ FF DP L
Sbjct 7 SLAVTAFILGGCSLIPDYQTPEAPVAAQWPQGPAYSPTQSADVAAAEQGWRQFFHDPALQ 66
Query 68 QVIELALNNNRDLRTAALNIQRAQQQYQITENNQLPTIGASGSAIRQVSITRDPNNPYST 127
Q+I+ +L NNRDLR AALN+ + QY+I + P + A+GS RQ R P N T
Sbjct 67 QLIQTSLVNNRDLRVAALNLDAYRAQYRIQRADLFPAVSATGSGSRQ----RVPANMSQT 122
Query 128 FQVG--------LGVTAYELDFWGRVRSLKDAALDNYLATQSTRDTTQISLVSQVAQAWL 179
+ G LGV+AYELD +GRVRSL + AL+ YL+++ R +TQI+LV+ VA A+
Sbjct 123 GESGITSQYSATLGVSAYELDLFGRVRSLTEQALETYLSSEQARRSTQIALVASVANAYY 182
Query 180 SYSFAVANLKLADQTLKAQLDSYNLNKKRFDVGIDSEVPLRQAQISVETARNDVANYKTQ 239
++ A KL ++TLK +SYNL ++ +VG+ S + + QA+ +VE AR + Y+
Sbjct 183 TWQADQALFKLTEETLKTYEESYNLTRRSNEVGVASALDVSQARTAVEGARVKYSQYQRL 242
Query 240 IVQAQNLLNLLVGQSVPQNLLPNQPVKSITRQNVFSTGLPSDLLNNRPDVKSAEYQLSAA 299
+ Q N L +L+G +P +L + + V GLPSD+L RPD++ AE+ L AA
Sbjct 243 VAQDVNSLTVLLGTGIPADLAKPLELDADQLAEV-PAGLPSDILQRRPDIQEAEHLLKAA 301
Query 300 GANIGAAKAALFPTISLTGSAGYASTQLSDLFKSGAGVWSIGPSLELPIFDWGTRRANIK 359
ANIGAA+AA FP+ISLT +AG S + LF G G W P + LPIF+ G+ +A++
Sbjct 302 NANIGAARAAFFPSISLTANAGSLSPDMGHLFSGGQGTWLFQPQINLPIFNAGSLKASLD 361
Query 360 ISETDQKIALSNYEKSIQSAFREVNDALATRANIGDRISAQRRLVDATNTTYSLSNARFR 419
S+ + I ++ YEK+IQ+AF+EV+D LA R +++ AQR LV A Y L+ R+R
Sbjct 362 YSKIQKDINVAKYEKTIQTAFQEVSDGLAARKTFEEQLQAQRDLVQANQDYYRLAERRYR 421
Query 420 AGIDNYLTVLDAQRTSYSAEQGLLLLEQANLNNQIELYKTLGGG 463
GID+ LT LDAQR +SA+Q L+ + L +++ LYK LGGG
Sbjct 422 IGIDSNLTFLDAQRNLFSAQQALIGDRLSQLTSEVNLYKALGGG 465
>Q9WWZ8 Toluene efflux pump outer membrane protein TtgC [Pseudomonas
putida (strain DOT-T1E)]
Length=484
Score = 330 bits (845), Expect = 2e-111
Identities = 192/464 (41%), Positives = 280/464 (60%), Gaps = 17/464 (4%)
Query 12 SIAVSALALA-LAACQSMRGPEPVVKADIPTSYTYN---ASGQSIAEQGYKDFFSDPRLL 67
S+AV+A L + + PE V A P Y+ ++ + AEQG++ FF DP L
Sbjct 7 SLAVTAFILGGCSLIPDYQTPEAPVAAQWPQGPAYSPTQSADVAAAEQGWRQFFHDPALQ 66
Query 68 QVIELALNNNRDLRTAALNIQRAQQQYQITENNQLPTIGASGSAIRQVSITRDPNNPYST 127
Q+I+ +L NNRDLR AALN+ + QY+I + P + A+GS RQ R P N T
Sbjct 67 QLIQTSLVNNRDLRVAALNLDAYRAQYRIQRADLFPAVSATGSGSRQ----RVPANMSQT 122
Query 128 FQVG--------LGVTAYELDFWGRVRSLKDAALDNYLATQSTRDTTQISLVSQVAQAWL 179
+ G LGV+AYELD +GRVRSL + AL+ YL+++ R +TQI+LV+ VA A+
Sbjct 123 GESGITSQYSATLGVSAYELDLFGRVRSLTEQALETYLSSEQARRSTQIALVASVANAYY 182
Query 180 SYSFAVANLKLADQTLKAQLDSYNLNKKRFDVGIDSEVPLRQAQISVETARNDVANYKTQ 239
++ A KL ++TLK +SYNL ++ +VG+ S + + QA+ +VE AR + Y+
Sbjct 183 TWQADQALFKLTEETLKTYEESYNLTRRSNEVGVASALDVSQARTAVEGARVKYSQYQRL 242
Query 240 IVQAQNLLNLLVGQSVPQNLLPNQPVKSITRQNVFSTGLPSDLLNNRPDVKSAEYQLSAA 299
+ Q N L +L+G +P +L + + V GLPSD+L RPD++ AE+ L AA
Sbjct 243 VAQDVNSLTVLLGTGIPADLAKPLELDADQLAEV-PAGLPSDILQRRPDIQEAEHLLKAA 301
Query 300 GANIGAAKAALFPTISLTGSAGYASTQLSDLFKSGAGVWSIGPSLELPIFDWGTRRANIK 359
ANIGAA+AA FP+ISLT +AG S + LF G G W P + LPIF+ G+ +A++
Sbjct 302 NANIGAARAAFFPSISLTANAGSLSPDMGHLFAGGQGTWLFQPQINLPIFNAGSLKASLD 361
Query 360 ISETDQKIALSNYEKSIQSAFREVNDALATRANIGDRISAQRRLVDATNTTYSLSNARFR 419
S+ + I ++ YEK+IQ+AF+EV+D LA R +++ AQR LV A Y L+ R+R
Sbjct 362 YSKIQKDINVAKYEKTIQTAFQEVSDGLAARKTFEEQLQAQRDLVQANQDYYRLAERRYR 421
Query 420 AGIDNYLTVLDAQRTSYSAEQGLLLLEQANLNNQIELYKTLGGG 463
GID+ LT LDAQR +SA+Q L+ + L +++ LYK LGGG
Sbjct 422 IGIDSNLTFLDAQRNLFSAQQALIGDRLSQLTSEVNLYKALGGG 465
>O31101 Solvent efflux pump outer membrane protein SrpC [Pseudomonas
putida]
Length=470
Score = 326 bits (835), Expect = 3e-110
Identities = 196/465 (42%), Positives = 282/465 (61%), Gaps = 16/465 (3%)
Query 11 RSIAVSALALALAACQSM---RGPEPVVKADIPTSYTYNASGQ----SIAEQGYKDFFSD 63
+S+ + AL L L C + + P ++A PT Y G + A K+FF D
Sbjct 4 KSLPMFAL-LMLGGCSLIPDYQQPAAPMQAQWPTGQAYGGQGDQRSIATALPKAKEFFKD 62
Query 64 PRLLQVIELALNNNRDLRTAALNIQRAQQQYQITENNQLPTIG--ASGSAIR---QVSIT 118
P L+++++ AL NNRDLR AA N++ + Y+I + PT+ ASG+ R +S T
Sbjct 63 PALVRLLDAALENNRDLRIAAKNVESYRALYRIQRAERFPTLDGQASGNRTRLPDDLSPT 122
Query 119 RDPNNPYSTFQVGLGVTAYELDFWGRVRSLKDAALDNYLATQSTRDTTQISLVSQVAQAW 178
D S +QVGL VTAYELD +GR+RSL + AL+ YLAT+ + + QI+L+ VA +
Sbjct 123 GDSRID-SQYQVGL-VTAYELDLFGRIRSLSNQALEKYLATEEAQRSVQIALIGDVATTY 180
Query 179 LSYSFAVANLKLADQTLKAQLDSYNLNKKRFDVGIDSEVPLRQAQISVETARNDVANYKT 238
+ A L+L + TL + ++S + + G SE+ +RQA+ V A+ A Y
Sbjct 181 FLWRTDQALLELTEATLTSYVESLAMIESSAWAGTSSELDVRQARTLVNQAQAQQALYTR 240
Query 239 QIVQAQNLLNLLVGQSVPQNLLPNQPVKSITRQNVFSTGLPSDLLNNRPDVKSAEYQLSA 298
+I Q N L LL+G +P +L N P+ +++ GLP+DLL NRPD++SAE+QL A
Sbjct 241 RIAQDVNALELLLGSKIPTDLPKNSPL-AMSALGKVPAGLPADLLLNRPDIRSAEHQLMA 299
Query 299 AGANIGAAKAALFPTISLTGSAGYASTQLSDLFKSGAGVWSIGPSLELPIFDWGTRRANI 358
A ANIGAA+AA FP ISLT SAG AS+ L LF SG+ WS P + +PIF+ G RAN+
Sbjct 300 ANANIGAARAAFFPRISLTASAGSASSDLDGLFNSGSDSWSFAPQISVPIFNAGKLRANL 359
Query 359 KISETDQKIALSNYEKSIQSAFREVNDALATRANIGDRISAQRRLVDATNTTYSLSNARF 418
+E + + ++ YEKSIQ+AFREV D LA R G ++SAQ LVD +SL+ R+
Sbjct 360 DYAELQKDVGVATYEKSIQTAFREVADGLAARGTYGKQLSAQSELVDNYKAYFSLAQQRY 419
Query 419 RAGIDNYLTVLDAQRTSYSAEQGLLLLEQANLNNQIELYKTLGGG 463
G+D+YLTVLDAQR +S++Q LL + +N++++LYK LGGG
Sbjct 420 DQGVDSYLTVLDAQRELFSSQQKLLNDQLDQINSEVQLYKALGGG 464
>Q93PU3 Toluene efflux pump outer membrane protein TtgI [Pseudomonas
putida (strain DOT-T1E)]
Length=470
Score = 326 bits (835), Expect = 3e-110
Identities = 196/465 (42%), Positives = 282/465 (61%), Gaps = 16/465 (3%)
Query 11 RSIAVSALALALAACQSM---RGPEPVVKADIPTSYTYNASGQ----SIAEQGYKDFFSD 63
+S+ + AL L L C + + P ++A PT Y G + A K+FF D
Sbjct 4 KSLPMFAL-LMLGGCSLIPDYQQPAAPMQAQWPTGQAYGGQGDQRSIATALPKAKEFFKD 62
Query 64 PRLLQVIELALNNNRDLRTAALNIQRAQQQYQITENNQLPTIG--ASGSAIR---QVSIT 118
P L+++++ AL NNRDLR AA N++ + Y+I + PT+ ASG+ R +S T
Sbjct 63 PALVRLLDAALENNRDLRIAAKNVESYRALYRIQRAERFPTLDGQASGNRTRLPDDLSPT 122
Query 119 RDPNNPYSTFQVGLGVTAYELDFWGRVRSLKDAALDNYLATQSTRDTTQISLVSQVAQAW 178
D S +QVGL VTAYELD +GR+RSL + AL+ YLAT+ + + QI+L+ VA +
Sbjct 123 GDSRID-SQYQVGL-VTAYELDLFGRIRSLSNQALEKYLATEEAQRSVQIALIGDVATTY 180
Query 179 LSYSFAVANLKLADQTLKAQLDSYNLNKKRFDVGIDSEVPLRQAQISVETARNDVANYKT 238
+ A L+L + TL + ++S + + G SE+ +RQA+ V A+ A Y
Sbjct 181 FLWRTDQALLELTEATLTSYVESLAMIESSAWAGTSSELDVRQARTLVNQAQAQQALYTR 240
Query 239 QIVQAQNLLNLLVGQSVPQNLLPNQPVKSITRQNVFSTGLPSDLLNNRPDVKSAEYQLSA 298
+I Q N L LL+G +P +L N P+ +++ GLP+DLL NRPD++SAE+QL A
Sbjct 241 RIAQDVNALELLLGSKIPTDLPKNSPL-AMSALGKVPAGLPADLLLNRPDIRSAEHQLMA 299
Query 299 AGANIGAAKAALFPTISLTGSAGYASTQLSDLFKSGAGVWSIGPSLELPIFDWGTRRANI 358
A ANIGAA+AA FP ISLT SAG AS+ L LF SG+ WS P + +PIF+ G RAN+
Sbjct 300 ANANIGAARAAFFPRISLTASAGSASSDLDGLFNSGSDSWSFAPQISVPIFNAGKLRANL 359
Query 359 KISETDQKIALSNYEKSIQSAFREVNDALATRANIGDRISAQRRLVDATNTTYSLSNARF 418
+E + + ++ YEKSIQ+AFREV D LA R G ++SAQ LVD +SL+ R+
Sbjct 360 DYAELQKDVGVATYEKSIQTAFREVADGLAARGTYGKQLSAQSELVDNYKAYFSLAQQRY 419
Query 419 RAGIDNYLTVLDAQRTSYSAEQGLLLLEQANLNNQIELYKTLGGG 463
G+D+YLTVLDAQR +S++Q LL + +N++++LYK LGGG
Sbjct 420 DQGVDSYLTVLDAQRELFSSQQKLLNDQLDQINSEVQLYKALGGG 464
>Q9KWV3 Toluene efflux pump outer membrane protein TtgF [Pseudomonas
putida (strain DOT-T1E)]
Length=480
Score = 308 bits (788), Expect = 5e-103
Identities = 196/484 (40%), Positives = 278/484 (57%), Gaps = 35/484 (7%)
Query 17 ALALALAACQSM----RGPEPVVKADIPTSYTY--------NASGQSIAEQGYKDFFSDP 64
AL++AL+ C + R P P+ +A P Y S AE ++ FF DP
Sbjct 9 ALSVALSGCSLIPDYQRPPAPI-QAGWPQGEAYAKLKAGTHRPSQTRDAELNWQVFFRDP 67
Query 65 RLLQVIELALNNNRDLRTAALNIQRAQQQYQITENNQLPTIGASGSAIRQVSITRDPNNP 124
+ ++I ALNNNRDLR ALN++ + ++I + LP A RQ R P +
Sbjct 68 VMRELIATALNNNRDLRQTALNVEAYRALHRIERSALLPRANTGVGATRQ----RLPADL 123
Query 125 YSTFQVGLGVT-------AYELDFWGRVRSLKDAALDNYLATQSTRDTTQISLVSQVAQA 177
T + G+ +YELD +GR+RSL+ AAL YLA T+ + QI+L++ VA A
Sbjct 124 SPTGEAGIQSQYDTTLSMSYELDMFGRLRSLERAALQEYLAAAETQRSMQIALIADVAIA 183
Query 178 WLSYSFAVANLKLADQTLKAQLDSYNLNKKRFDVGIDSEVPLRQAQISVETARNDVANYK 237
+LS+ A L LA TL + +S NL K +VG S + +RQA+ VETAR Y
Sbjct 184 YLSWRSDQAQLDLARSTLASYENSLNLIKSSREVGTASALDVRQARSLVETARVQQTLYT 243
Query 238 TQIVQAQNLLNLLVGQSVPQNLLPNQPVKSITRQNV--FSTGLPSDLLNNRPDVKSAEYQ 295
Q+ Q N L LL+G +P +L P+ + Q + STGLP+DLL +RPD+++AE++
Sbjct 244 RQVAQDMNALQLLLGTKLPADL----PISDVLDQPLAALSTGLPADLLLHRPDIRAAEHR 299
Query 296 LSAAGANIGAAKAALFPTISLTGSAGYASTQLSDLFKSGAGVWSIGPSLELPIFDWGTRR 355
L AA ANIGAA+AA FP+I+LT +AG AS +L LF+ G+G+W+ P + LPIF G R
Sbjct 300 LLAANANIGAARAAFFPSITLTAAAGTASHELDGLFEGGSGLWAFMPRINLPIFTAGRLR 359
Query 356 ANIKISETDQKIALSNYEKSIQSAFREVNDALATRANIGDRISAQRRLVDATNTTYSLSN 415
N+ + I ++ YEKSIQ+AFREV D LA R G+++ AQR LVD Y L+
Sbjct 360 GNLDYRNVIKDINVAEYEKSIQTAFREVADGLAARGTFGEQLQAQRDLVDNNQAYYKLAY 419
Query 416 ARFRAGIDNYLTVLDAQRTSYSAEQGLLLLEQANLNNQIELYKTLGGGLKANTTDTVVHQ 475
R+ G+DNYL VLDAQR ++A+Q L L++++ L+K LGGG D + Q
Sbjct 420 QRYDEGVDNYLAVLDAQRELFAAQQQFLSDRLNQLSSEVRLFKALGGG-----WDNISSQ 474
Query 476 PSSA 479
P +A
Sbjct 475 PLTA 478
Score = 25.0 bits (53), Expect = 0.073
Identities = 22/82 (27%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query 11 RSIAVSALALALAACQSMRGPEPVVKADIPTSYTYNASGQSIAEQGYKDFFSDPRLLQVI 70
RS+ +AL LAA ++ R + + AD+ +Y S Q+ + S L +I
Sbjct 152 RSLERAALQEYLAAAETQRSMQIALIADVAIAYLSWRSDQAQLDLARSTLASYENSLNLI 211
Query 71 ELALNNNRDLRTA-ALNIQRAQ 91
+ ++R++ TA AL++++A+
Sbjct 212 K----SSREVGTASALDVRQAR 229
>Q849R1 Probable efflux pump outer membrane protein SepC [Pseudomonas
putida (strain ATCC 700007 / DSM 6899 / BCRC 17059 /
F1)]
Length=480
Score = 308 bits (788), Expect = 5e-103
Identities = 196/484 (40%), Positives = 278/484 (57%), Gaps = 35/484 (7%)
Query 17 ALALALAACQSM----RGPEPVVKADIPTSYTY--------NASGQSIAEQGYKDFFSDP 64
AL++AL+ C + R P P+ +A P Y S AE ++ FF DP
Sbjct 9 ALSVALSGCSLIPDYQRPPAPI-QAGWPQGEAYAKLKAGTHRPSQTRDAELNWQVFFRDP 67
Query 65 RLLQVIELALNNNRDLRTAALNIQRAQQQYQITENNQLPTIGASGSAIRQVSITRDPNNP 124
+ ++I ALNNNRDLR ALN++ + ++I + LP A RQ R P +
Sbjct 68 VMRELIATALNNNRDLRQTALNVEAYRALHRIERSALLPRANTGVGATRQ----RLPADL 123
Query 125 YSTFQVGLGVT-------AYELDFWGRVRSLKDAALDNYLATQSTRDTTQISLVSQVAQA 177
T + G+ +YELD +GR+RSL+ AAL YLA T+ + QI+L++ VA A
Sbjct 124 SPTGEAGIQSQYDTTLSMSYELDMFGRLRSLERAALQEYLAAAETQRSMQIALIADVAIA 183
Query 178 WLSYSFAVANLKLADQTLKAQLDSYNLNKKRFDVGIDSEVPLRQAQISVETARNDVANYK 237
+LS+ A L LA TL + +S NL K +VG S + +RQA+ VETAR Y
Sbjct 184 YLSWRSDQAQLDLARSTLASYENSLNLIKSSREVGTASALDVRQARSLVETARVQQTLYT 243
Query 238 TQIVQAQNLLNLLVGQSVPQNLLPNQPVKSITRQNV--FSTGLPSDLLNNRPDVKSAEYQ 295
Q+ Q N L LL+G +P +L P+ + Q + STGLP+DLL +RPD+++AE++
Sbjct 244 RQVAQDMNALQLLLGTKLPADL----PISDVLDQPLAALSTGLPADLLLHRPDIRAAEHR 299
Query 296 LSAAGANIGAAKAALFPTISLTGSAGYASTQLSDLFKSGAGVWSIGPSLELPIFDWGTRR 355
L AA ANIGAA+AA FP+I+LT +AG AS +L LF+ G+G+W+ P + LPIF G R
Sbjct 300 LLAANANIGAARAAFFPSITLTAAAGTASHELDGLFEGGSGLWAFMPRINLPIFTAGRLR 359
Query 356 ANIKISETDQKIALSNYEKSIQSAFREVNDALATRANIGDRISAQRRLVDATNTTYSLSN 415
N+ + I ++ YEKSIQ+AFREV D LA R G+++ AQR LVD Y L+
Sbjct 360 GNLDYRNVIKDINVAEYEKSIQTAFREVADGLAARGTFGEQLQAQRDLVDNNQAYYKLAY 419
Query 416 ARFRAGIDNYLTVLDAQRTSYSAEQGLLLLEQANLNNQIELYKTLGGGLKANTTDTVVHQ 475
R+ G+DNYL VLDAQR ++A+Q L L++++ L+K LGGG D + Q
Sbjct 420 QRYDEGVDNYLAVLDAQRELFAAQQQFLSDRLNQLSSEVRLFKALGGG-----WDNISSQ 474
Query 476 PSSA 479
P +A
Sbjct 475 PLTA 478
Score = 25.0 bits (53), Expect = 0.073
Identities = 22/82 (27%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query 11 RSIAVSALALALAACQSMRGPEPVVKADIPTSYTYNASGQSIAEQGYKDFFSDPRLLQVI 70
RS+ +AL LAA ++ R + + AD+ +Y S Q+ + S L +I
Sbjct 152 RSLERAALQEYLAAAETQRSMQIALIADVAIAYLSWRSDQAQLDLARSTLASYENSLNLI 211
Query 71 ELALNNNRDLRTA-ALNIQRAQ 91
+ ++R++ TA AL++++A+
Sbjct 212 K----SSREVGTASALDVRQAR 229
>Q8CWA4 Cation efflux system protein CusC [Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC)]
Length=460
Score = 289 bits (740), Expect = 4e-96
Identities = 173/454 (38%), Positives = 268/454 (59%), Gaps = 15/454 (3%)
Query 18 LALALAACQSMRGPEPVVKADIPTSYTYNASG-----QSIAEQGYKDFFSDPRLLQVIEL 72
+ALAL C S+ +P ++ + +G + G++ FF D ++ +I
Sbjct 11 VALALTGC-SLAPDYQRPAMPVPQQFSLSQNGLVNAADNYQNAGWRTFFVDNQVKTLISE 69
Query 73 ALNNNRDLRTAALNIQRAQQQYQITENNQLPTIGASGSAIRQVSITRDPNNPYSTFQVGL 132
AL NNRDLR AAL +Q A+ QY++T+ ++ P + GS ++ D F GL
Sbjct 70 ALVNNRDLRMAALKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTRE-FSTGL 128
Query 133 GVTAYELDFWGRVRSLKDAALDNYLATQSTRDTTQISLVSQVAQAWLSYSFAVANLKLAD 192
+ ++LDF+GR++++ +A NYLAT+ + I LVS VAQ++ + A A L++A+
Sbjct 129 NAS-FDLDFFGRLKNMSEAERQNYLATEEAQRAVHILLVSNVAQSYFNQQLAYAQLQIAE 187
Query 193 QTLKAQLDSYNLNKKRFDVGIDSEVPLRQAQISVETARNDVANYKTQIVQAQNLLNLLVG 252
+TL+ SY +K+ G + + L QA+ +E+ R+D+A + ++ QA N L LL+G
Sbjct 188 ETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLG 247
Query 253 Q--SVPQNLLPNQPVKSITRQNV-FSTGLPSDLLNNRPDVKSAEYQLSAAGANIGAAKAA 309
+PQ Q V S + Q+V GLPS +L RPD+ AE+ L AA ANIGAA+AA
Sbjct 248 SYGKLPQA----QTVNSDSLQSVKLPAGLPSQILLQRPDIMEAEHALMAANANIGAARAA 303
Query 310 LFPTISLTGSAGYASTQLSDLFKSGAGVWSIGPSLELPIFDWGTRRANIKISETDQKIAL 369
FP+ISLT AS+ LS LF + +G+W+ P +E+PIF+ G +AN+ I+E Q+ ++
Sbjct 304 FFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSV 363
Query 370 SNYEKSIQSAFREVNDALATRANIGDRISAQRRLVDATNTTYSLSNARFRAGIDNYLTVL 429
NYE+ IQ+AF+EV DALA R ++ D+ISAQ+R + + T + ++ G +YL VL
Sbjct 364 VNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARTLYQHGAVSYLEVL 423
Query 430 DAQRTSYSAEQGLLLLEQANLNNQIELYKTLGGG 463
DA+R+ ++ Q LL L A N+I LY LGGG
Sbjct 424 DAERSLFATRQTLLDLNYARQVNEISLYTALGGG 457
>P77211 Cation efflux system protein CusC [Escherichia coli (strain
K12)]
Length=457
Score = 286 bits (732), Expect = 5e-95
Identities = 172/455 (38%), Positives = 269/455 (59%), Gaps = 17/455 (4%)
Query 18 LALALAACQSMRGPEPVVKADIPTSYTYNASG-----QSIAEQGYKDFFSDPRLLQVIEL 72
+ALAL C S+ +P ++ + +G + G++ FF D ++ +I
Sbjct 11 VALALTGC-SLAPDYQRPAMPVPQQFSLSQNGLVNAADNYQNAGWRTFFVDNQVKTLISE 69
Query 73 ALNNNRDLRTAALNIQRAQQQYQITENNQLPTIGASGSAIRQVSITRDPNNPYSTFQVGL 132
AL NNRDLR A L +Q A+ QY++T+ ++ P + GS ++ N +T +
Sbjct 70 ALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLK---GNTATTREFST 126
Query 133 GVTA-YELDFWGRVRSLKDAALDNYLATQSTRDTTQISLVSQVAQAWLSYSFAVANLKLA 191
G+ A ++LDF+GR++++ +A NYLAT+ + I LVS VAQ++ + A A L++A
Sbjct 127 GLNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHILLVSNVAQSYFNQQLAYAQLQIA 186
Query 192 DQTLKAQLDSYNLNKKRFDVGIDSEVPLRQAQISVETARNDVANYKTQIVQAQNLLNLLV 251
++TL+ SY +K+ G + + L QA+ +E+ R+D+A + ++ QA N L LL+
Sbjct 187 EETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLL 246
Query 252 GQ--SVPQNLLPNQPVKSITRQNV-FSTGLPSDLLNNRPDVKSAEYQLSAAGANIGAAKA 308
G +PQ Q V S + Q+V GL S +L RPD+ AE+ L AA ANIGAA+A
Sbjct 247 GSYGKLPQA----QTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAARA 302
Query 309 ALFPTISLTGSAGYASTQLSDLFKSGAGVWSIGPSLELPIFDWGTRRANIKISETDQKIA 368
A FP+ISLT AS+ LS LF + +G+W+ P +E+PIF+ G +AN+ I+E Q+ +
Sbjct 303 AFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQS 362
Query 369 LSNYEKSIQSAFREVNDALATRANIGDRISAQRRLVDATNTTYSLSNARFRAGIDNYLTV 428
+ NYE+ IQ+AF+EV DALA R ++ D+ISAQ+R + + T + A ++ G +YL V
Sbjct 363 VVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYLEV 422
Query 429 LDAQRTSYSAEQGLLLLEQANLNNQIELYKTLGGG 463
LDA+R+ ++ Q LL L A N+I LY LGGG
Sbjct 423 LDAERSLFATRQTLLDLNYARQVNEISLYTALGGG 457
>Q8XBY3 Cation efflux system protein CusC [Escherichia coli O157:H7]
Length=460
Score = 286 bits (732), Expect = 6e-95
Identities = 171/454 (38%), Positives = 267/454 (59%), Gaps = 15/454 (3%)
Query 18 LALALAACQSMRGPEPVVKADIPTSYTYNASG-----QSIAEQGYKDFFSDPRLLQVIEL 72
+ALAL C S+ +P ++ + +G + G++ FF D ++ +I
Sbjct 11 VALALTGC-SLAPDYQRPAMPVPQQFSLSQNGLVNAADNYQNAGWRTFFVDNQVKTLISE 69
Query 73 ALNNNRDLRTAALNIQRAQQQYQITENNQLPTIGASGSAIRQVSITRDPNNPYSTFQVGL 132
AL NNRDLR A L +Q A+ QY++T+ ++ P + GS ++ D F GL
Sbjct 70 ALENNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTRE-FSTGL 128
Query 133 GVTAYELDFWGRVRSLKDAALDNYLATQSTRDTTQISLVSQVAQAWLSYSFAVANLKLAD 192
+ ++LDF+GR++++ +A NYLAT+ + I LVS VAQ++ + A A L++A+
Sbjct 129 NAS-FDLDFFGRLKNMSEAERQNYLATEEAQRAVHILLVSNVAQSYFNQQLAYAQLQIAE 187
Query 193 QTLKAQLDSYNLNKKRFDVGIDSEVPLRQAQISVETARNDVANYKTQIVQAQNLLNLLVG 252
+TL+ SY +K+ G + + L QA+ +E+ R+D+A + ++ QA N L LL+G
Sbjct 188 ETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLG 247
Query 253 Q--SVPQNLLPNQPVKSITRQNV-FSTGLPSDLLNNRPDVKSAEYQLSAAGANIGAAKAA 309
+PQ Q V S + Q+V GL S +L RPD+ AE+ L AA ANIGAA+AA
Sbjct 248 SYGKLPQA----QTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAARAA 303
Query 310 LFPTISLTGSAGYASTQLSDLFKSGAGVWSIGPSLELPIFDWGTRRANIKISETDQKIAL 369
FP+ISLT AS+ LS LF + +G+W+ P +E+PIF+ G +AN+ I+E Q+ ++
Sbjct 304 FFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSV 363
Query 370 SNYEKSIQSAFREVNDALATRANIGDRISAQRRLVDATNTTYSLSNARFRAGIDNYLTVL 429
NYE+ IQ+AF+EV DALA R ++ D+ISAQ+R + + T + A ++ G +YL VL
Sbjct 364 VNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYLEVL 423
Query 430 DAQRTSYSAEQGLLLLEQANLNNQIELYKTLGGG 463
DA+R+ ++ Q +L L A N+I LY LGGG
Sbjct 424 DAERSLFATRQTVLDLNYARQVNEISLYTALGGG 457
>Q9ZHD2 Probable outer membrane lipoprotein SilC [Salmonella typhimurium]
Length=461
Score = 280 bits (716), Expect = 1e-92
Identities = 161/453 (36%), Positives = 265/453 (58%), Gaps = 20/453 (4%)
Query 22 LAACQSM-----RGPEPVVKADIPTSYTYNASGQSIAEQGYKDFFSDPRLLQVIELALNN 76
LA C S+ R P PV + + + + S + G+++FF DP++ ++I ALNN
Sbjct 15 LAGCVSLAPEYQRPPAPVPQQFSLSKNSLTPAVNSYQDTGWRNFFVDPQVSRLIGEALNN 74
Query 77 NRDLRTAALNIQRAQQQYQITENNQLPTIGASGSAIRQVSITRDPNNPYSTFQVGLGVTA 136
NRDLR AAL ++ A+ Q+ +T+ ++ P + AS + D + GL ++
Sbjct 75 NRDLRMAALKVEEARAQFNVTDADRYPQLNASSGITYNGGLKGDKPTTQE-YDAGLELS- 132
Query 137 YELDFWGRVRSLKDAALDNYLATQSTRDTTQISLVSQVAQAWLSYSFAVANLKLADQTLK 196
YELDF+G+++++ +A NY A++ R I LVS V+Q++ S A L++A +TLK
Sbjct 133 YELDFFGKLKNMSEADRQNYFASEEARRAVHILLVSNVSQSYFSQQLAYEQLRIARETLK 192
Query 197 AQLDSYNLNKKRFDVGIDSEVPLRQAQISVETARNDVANYKTQIVQAQNLLNLLVG--QS 254
SY +++ G + + L QA+ +E+ R ++A + + QA N L L++G ++
Sbjct 193 NYEQSYAFVEQQLVTGSTNVLALEQARGQIESTRAEIAKREGDLAQANNALQLVLGTYRA 252
Query 255 VPQNLLPNQPVKSITRQNVFSTGLP----SDLLNNRPDVKSAEYQLSAAGANIGAAKAAL 310
VP K I + LP S +L RPD+ AEYQL AA ANIGAA+AA
Sbjct 253 VPSE-------KGIKGGEIAPVKLPPNLSSQILLQRPDIMEAEYQLKAADANIGAARAAF 305
Query 311 FPTISLTGSAGYASTQLSDLFKSGAGVWSIGPSLELPIFDWGTRRANIKISETDQKIALS 370
FP+I+LT +ST+LS LF SG+G+W+ P +E+PIF+ G +AN+K++E Q+ ++
Sbjct 306 FPSITLTSGLSSSSTELSSLFTSGSGMWNFIPKIEIPIFNAGRNKANLKLAEIRQQQSVV 365
Query 371 NYEKSIQSAFREVNDALATRANIGDRISAQRRLVDATNTTYSLSNARFRAGIDNYLTVLD 430
NYE+ IQSAF++V+D LA R ++ ++ +Q+R +D+ T + + +G +Y+ VLD
Sbjct 366 NYEQKIQSAFKDVSDTLALRDSLSQQLESQQRYLDSLQITLQRARGLYASGAVSYIEVLD 425
Query 431 AQRTSYSAEQGLLLLEQANLNNQIELYKTLGGG 463
A+R+ ++ +Q +L L + N+I L+ LGGG
Sbjct 426 AERSLFATQQTILDLTYSRQVNEINLFTALGGG 458
>Q51397 Outer membrane protein OprJ [Pseudomonas aeruginosa (strain
ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG
12228 / 1C / PRS 101 / PAO1)]
Length=479
Score = 276 bits (707), Expect = 5e-91
Identities = 177/466 (38%), Positives = 262/466 (56%), Gaps = 20/466 (4%)
Query 12 SIAVSAL--ALALAACQSM----RGPEPVVKADIPTSYTYNASGQSIAEQGYKDFFSDPR 65
+ VSAL AL L AC R PV AD + G +I +K F D
Sbjct 5 AFGVSALLIALTLGACSMAPTYERPAAPV--ADSWSGAAAQRQGAAIDTLDWKSFIVDAE 62
Query 66 LLQVIELALNNNRDLRTAALNIQRAQQQYQITENNQLPTIGASGSAIRQVSITRDP---- 121
L +++++AL+NNR LR L+I+ A+ QY+I +++P + A+ + RQ R P
Sbjct 63 LRRLVDMALDNNRSLRQTLLDIEAARAQYRIQRADRVPGLNAAATGNRQ----RQPADLS 118
Query 122 ----NNPYSTFQVGLGVTAYELDFWGRVRSLKDAALDNYLATQSTRDTTQISLVSQVAQA 177
+ S++QVGL + YELD +GRV+SL DAAL YLA++ +I+LV++V+QA
Sbjct 119 AGNRSEVASSYQVGLALPEYELDLFGRVKSLTDAALQQYLASEEAARAARIALVAEVSQA 178
Query 178 WLSYSFAVANLKLADQTLKAQLDSYNLNKKRFDVGIDSEVPLRQAQISVETARNDVANYK 237
+LSY A+ L L QTL ++ S+ L +R G + + ++A VE AR +
Sbjct 179 YLSYDGALRRLALTRQTLVSREYSFALIDQRRAAGAATALDYQEALGLVEQARAEQERNL 238
Query 238 TQIVQAQNLLNLLVGQSVPQNLLPNQPVKSITRQNVFSTGLPSDLLNNRPDVKSAEYQLS 297
Q QA N L LL+G +P P + + G PS+L+ RPD+ +AE++L
Sbjct 239 RQKQQAFNALVLLLGSDDAAQAIPRSPGQRPKLLQDIAPGTPSELIERRPDILAAEHRLR 298
Query 298 AAGANIGAAKAALFPTISLTGSAGYASTQLSDLFKSGAGVWSIGPSLELPIFDWGTRRAN 357
A A+IGAA+AA FP ISLTGS G +S ++S LF G+ WS P+L LPIFD G RAN
Sbjct 299 ARNADIGAARAAFFPRISLTGSFGTSSAEMSGLFDGGSRSWSFLPTLTLPIFDGGRNRAN 358
Query 358 IKISETDQKIALSNYEKSIQSAFREVNDALATRANIGDRISAQRRLVDATNTTYSLSNAR 417
+ ++E + A++ YE +IQ+AFREV DALA + A R L +++N L+ AR
Sbjct 359 LSLAEARKDSAVAAYEGTIQTAFREVADALAASDTLRREEKALRALANSSNEALKLAKAR 418
Query 418 FRAGIDNYLTVLDAQRTSYSAEQGLLLLEQANLNNQIELYKTLGGG 463
+ +G+DN+L LDAQR+S+ E + ++L++ LGGG
Sbjct 419 YESGVDNHLRYLDAQRSSFLNEIAFIDGSTQRQIALVDLFRALGGG 464
Score = 21.2 bits (43), Expect = 1.2
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 0/42 (0%)
Query 303 IGAAKAALFPTISLTGSAGYASTQLSDLFKSGAGVWSIGPSL 344
+ A +++ I+ + L DLF++ G W G SL
Sbjct 430 LDAQRSSFLNEIAFIDGSTQRQIALVDLFRALGGGWDEGRSL 471
>P15727 Nodulation protein T [Rhizobium leguminosarum bv. viciae]
Length=482
Score = 154 bits (388), Expect = 1e-44
Identities = 123/462 (27%), Positives = 223/462 (48%), Gaps = 18/462 (4%)
Query 13 IAVSALALALAACQSMRGPEPVV-KADIPTSYTYNA--SGQSIAEQGYKDFFSDPRLLQV 69
+A + L L L++C M GP+ + +P ++ A S +A + D FSD L Q
Sbjct 6 LAAAVLPLLLSSC--MLGPDHAPPETPLPEKFSEGAKQSAGDVAVSAWWDSFSDRTLNQY 63
Query 70 IELALNNNRDLRTAALNIQRAQQQYQITENNQLPTIGASGSAIRQVSITRDPNNPYSTFQ 129
+ L+ N ++ A + A I LP AS + ++ D + +
Sbjct 64 VASGLDENLSVQQALERVNAAAADVTIAGAGGLPK--ASHTTSGEIGKGGDITSTQNISS 121
Query 130 VGLGVTAYELDFWGRVRSLKDAALDNYLATQSTRDTTQISLVSQVAQAWLSYSFAVANLK 189
V L +T + LD +G+ R ++AL + + + D +++L+ + +++ + +
Sbjct 122 VQLSLT-WLLDVFGQYRRSTESALASLDSAHAAVDAAKLALIKDLVSSYIDARYYQQRVS 180
Query 190 LADQTLKAQLDSYNLNKKRFDVGIDSEVPLRQAQISVETARNDVANYKTQI-VQAQNLLN 248
++ LK++ ++Y+ + + G S + QA+ V + ++ + V A ++
Sbjct 181 ISRANLKSRQETYDFTNLQVEAGAASRQDVLQAEGLVRSTIAEIPRLELNFRVSAHHIAA 240
Query 249 LLVGQSVPQNLLPNQPVKSITR---QNVFSTGLPSDLLNNRPDVKSAEYQLSAAGANIGA 305
LL ++P + Q KS + + + G+P+DL+ NR D++ AE L+AA A IG
Sbjct 241 LL---ALPSETVIKQLQKSEGQPVYRGKINAGIPADLIRNRFDIRQAERDLAAATAQIGV 297
Query 306 AKAALFPTISLTGSAGYASTQLSDLFKSGAGV-WSIGPSLELPIFDWGTRRANIKISETD 364
A+A L+P I+L+GS + + + G + WS GPSL+LPI D G RAN++ S++D
Sbjct 298 AEAQLYPAITLSGSI--TPSYIKQRGRHGGILKWSFGPSLDLPILDGGRLRANVETSKSD 355
Query 365 QKIALSNYEKSIQSAFREVNDALATRANIGDRISAQRRLVDATNTTYSLSNARFRAGIDN 424
A +++ ++ +A +EV DAL +++RR V+ LS A + G +
Sbjct 356 AAAAYISWKLTVLTAVQEVEDALTAVRRDVHTENSRRRQVETIEEALKLSTASYTDGASS 415
Query 425 YLTVLDAQRTSYSAEQGLLLLEQANLNNQIELYKTLGGGLKA 466
L VL+AQR SA+ L Q + + L + GG A
Sbjct 416 LLDVLEAQRQVSSAQASLAAAIQQLAKDHVRLNVAIRGGFAA 457
Lambda K H a alpha
0.315 0.129 0.355 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 2745220
Database: 42703363de98d00367373a0fbaedd59e.SwissProt.fasta
Posted date: May 9, 2024 5:21 PM
Number of letters in database: 7,120
Number of sequences in database: 15
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
