BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 5cc8bd58823b496b7193d20f0d5691db.SwissProt.fasta
           21 sequences; 4,840 total letters



Query= ACIAD2973

Length=238
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P21866 KDP operon transcriptional regulatory protein KdpE [Escher...  193     2e-65
P9WGN0 Transcriptional regulatory protein KdpE [Mycobacterium tub...  183     2e-61
P9WGN1 Transcriptional regulatory protein KdpE [Mycobacterium tub...  183     2e-61
Q2FWH6 Transcriptional regulatory protein KdpE [Staphylococcus au...  161     7e-53
Q9F868 Sensory transduction protein RegX3 [Mycolicibacterium smeg...  157     2e-51
P9WGL8 Sensory transduction protein RegX3 [Mycobacterium tubercul...  157     4e-51
P9WGL9 Sensory transduction protein RegX3 [Mycobacterium tubercul...  157     4e-51
O07130 Sensory transduction protein RegX3 [Mycobacterium bovis (s...  157     4e-51
O34903 Uncharacterized transcriptional regulatory protein YkoG [B...  154     7e-50
Q4A160 Transcriptional regulatory protein WalR [Staphylococcus sa...  154     8e-50
A6TXG8 Transcriptional regulatory protein WalR [Staphylococcus au...  153     1e-49
A7WWQ5 Transcriptional regulatory protein WalR [Staphylococcus au...  153     1e-49
Q9RDT5 Transcriptional regulatory protein WalR [Staphylococcus au...  153     1e-49
Q7A8E1 Transcriptional regulatory protein WalR [Staphylococcus au...  153     1e-49
Q2G2U6 Transcriptional regulatory protein WalR [Staphylococcus au...  153     1e-49
Q4LAJ9 Transcriptional regulatory protein WalR [Staphylococcus ha...  152     2e-49
Q5HK18 Transcriptional regulatory protein WalR [Staphylococcus ep...  152     2e-49
Q8CQK0 Transcriptional regulatory protein WalR [Staphylococcus ep...  152     2e-49
P37478 Transcriptional regulatory protein WalR [Bacillus subtilis...  151     6e-49
P28835 Probable transcriptional regulator ycf27 [Porphyridium aer...  149     6e-48
P76340 Transcriptional regulatory protein HprR [Escherichia coli ...  145     2e-46


>P21866 KDP operon transcriptional regulatory protein KdpE [Escherichia 
coli (strain K12)]
Length=225

 Score = 193 bits (491),  Expect = 2e-65
 Identities = 101/221 (46%), Positives = 145/221 (66%), Gaps = 0/221 (0%)

Query  10   SILIIDDEPQIRKFLDIALRAQGYAVHVAETGMKGLEILASQGADLLILDLGLPDMDGAE  69
            ++LI++DE  IR+FL  AL   G  V  AET  +GL   A++  DL+ILDLGLPD DG E
Sbjct  3    NVLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIE  62

Query  70   VLKEMRQWSQIPVIVLSARPDEQQKIKLLDAGANDYVTKPFSIQELCARIRVMFRQQPSQ  129
             ++++RQWS +PVIVLSAR +E  KI  LDAGA+DY++KPF I EL AR+RV  R+  + 
Sbjct  63   FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSAT  122

Query  130  SEHNLVFNDGQLFVDVAEHSVKLAGDDVVLTKKEFQLLALLIRHQGKIVTQKQILSELWG  189
            +  + +     + VD+A   +    ++V LT  EF+LLA+L+ + GK++TQ+Q+L+++WG
Sbjct  123  TAPDPLVKFSDVTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVWG  182

Query  190  ITHEEDTHYLRILVKKLRTKLGDSALQPHYIFTVAGIGLRF  230
                E +HYLRI +  LR KL     +P +  T  GIG RF
Sbjct  183  PNAVEHSHYLRIYMGHLRQKLEQDPARPRHFITETGIGYRF  223


>P9WGN0 Transcriptional regulatory protein KdpE [Mycobacterium 
tuberculosis (strain CDC 1551 / Oshkosh)]
Length=226

 Score = 183 bits (465),  Expect = 2e-61
 Identities = 98/223 (44%), Positives = 137/223 (61%), Gaps = 1/223 (0%)

Query  11   ILIIDDEPQIRKFLDIALRAQGYAVHVAETGMKGLEILASQGADLLILDLGLPDMDGAEV  70
            +L+IDDEPQI + L I L  +GY V  A TG   L   A    D++ILDLGLPDM G +V
Sbjct  4    VLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSGIDV  63

Query  71   LKEMRQWSQIPVIVLSARPDEQQKIKLLDAGANDYVTKPFSIQELCARIRVMFRQQPSQS  130
            L  +R W   PVIVLSAR D   K++ LDAGA+DYVTKPF + E  AR+R   R+  + +
Sbjct  64   LGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNTAAA  123

Query  131  E-HNLVFNDGQLFVDVAEHSVKLAGDDVVLTKKEFQLLALLIRHQGKIVTQKQILSELWG  189
            E    V       VD+A   V   G +V LT  E+ +L +L R++GK+V + ++L E+WG
Sbjct  124  ELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKEVWG  183

Query  190  ITHEEDTHYLRILVKKLRTKLGDSALQPHYIFTVAGIGLRFQS  232
              +  +THYLR+ + +LR KL D    P ++ T +G+G RF++
Sbjct  184  PAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFEA  226


>P9WGN1 Transcriptional regulatory protein KdpE [Mycobacterium 
tuberculosis (strain ATCC 25618 / H37Rv)]
Length=226

 Score = 183 bits (465),  Expect = 2e-61
 Identities = 98/223 (44%), Positives = 137/223 (61%), Gaps = 1/223 (0%)

Query  11   ILIIDDEPQIRKFLDIALRAQGYAVHVAETGMKGLEILASQGADLLILDLGLPDMDGAEV  70
            +L+IDDEPQI + L I L  +GY V  A TG   L   A    D++ILDLGLPDM G +V
Sbjct  4    VLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSGIDV  63

Query  71   LKEMRQWSQIPVIVLSARPDEQQKIKLLDAGANDYVTKPFSIQELCARIRVMFRQQPSQS  130
            L  +R W   PVIVLSAR D   K++ LDAGA+DYVTKPF + E  AR+R   R+  + +
Sbjct  64   LGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNTAAA  123

Query  131  E-HNLVFNDGQLFVDVAEHSVKLAGDDVVLTKKEFQLLALLIRHQGKIVTQKQILSELWG  189
            E    V       VD+A   V   G +V LT  E+ +L +L R++GK+V + ++L E+WG
Sbjct  124  ELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKEVWG  183

Query  190  ITHEEDTHYLRILVKKLRTKLGDSALQPHYIFTVAGIGLRFQS  232
              +  +THYLR+ + +LR KL D    P ++ T +G+G RF++
Sbjct  184  PAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFEA  226


>Q2FWH6 Transcriptional regulatory protein KdpE [Staphylococcus 
aureus (strain NCTC 8325 / PS 47)]
Length=231

 Score = 161 bits (408),  Expect = 7e-53
 Identities = 88/203 (43%), Positives = 126/203 (62%), Gaps = 0/203 (0%)

Query  8    QASILIIDDEPQIRKFLDIALRAQGYAVHVAETGMKGLEILASQGADLLILDLGLPDMDG  67
            Q+ ILII+D+  I   LD+AL    Y V  A+   +    +     D+++LDLGLPD DG
Sbjct  2    QSKILIIEDDHAITHLLDVALTLDYYNVTTADNATQAHFKIQIDKPDVILLDLGLPDKDG  61

Query  68   AEVLKEMRQWSQIPVIVLSARPDEQQKIKLLDAGANDYVTKPFSIQELCARIRVMFRQQP  127
              ++ E+RQ + IP+IV+SAR +EQ  I+ LD GANDY+TKPF++ EL ARIRV+ R   
Sbjct  62   LCLISEIRQHTDIPIIVISARQEEQTIIQALDNGANDYMTKPFNVDELRARIRVIERIAK  121

Query  128  SQSEHNLVFNDGQLFVDVAEHSVKLAGDDVVLTKKEFQLLALLIRHQGKIVTQKQILSEL  187
            S  E N+VF +G L +D    SV +   +V LT  EF LL LL  H+GK++T + IL  +
Sbjct  122  SHQETNIVFTNGLLSIDFGSKSVVINNQEVHLTPNEFSLLELLSNHKGKVLTYEMILKRI  181

Query  188  WGITHEEDTHYLRILVKKLRTKL  210
            +G  ++ +   LR+ +  LR KL
Sbjct  182  YGYVNKTEMPSLRVHMTSLRQKL  204


>Q9F868 Sensory transduction protein RegX3 [Mycolicibacterium 
smegmatis (strain ATCC 700084 / mc(2)155)]
Length=228

 Score = 157 bits (398),  Expect = 2e-51
 Identities = 83/225 (37%), Positives = 132/225 (59%), Gaps = 3/225 (1%)

Query  10   SILIIDDEPQIRKFLDIALRAQGYAVHVAETGMKGLEILASQGADLLILDLGLPDMDGAE  69
            S+LI++DE  +   L   LR +G+   V   G   L      GAD+++LDL LP M G +
Sbjct  3    SVLIVEDEESLADPLAFLLRKEGFEATVVGDGPSALAEFERSGADIVLLDLMLPGMSGTD  62

Query  70   VLKEMRQWSQIPVIVLSARPDEQQKIKLLDAGANDYVTKPFSIQELCARIRVMFRQQPSQ  129
            V K++R  S +PVI+++AR  E  K+  L+ GA+DYVTKP+S +EL ARIR + R+    
Sbjct  63   VCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGADN  122

Query  130  SEHNL---VFNDGQLFVDVAEHSVKLAGDDVVLTKKEFQLLALLIRHQGKIVTQKQILSE  186
             +      V   G + +DV  H V + G+ + L  KEF LL  L+R+ G+++T+ Q++  
Sbjct  123  DDAGADDGVLEAGPVRMDVERHVVSVNGEPITLPLKEFDLLEYLMRNSGRVLTRGQLIDR  182

Query  187  LWGITHEEDTHYLRILVKKLRTKLGDSALQPHYIFTVAGIGLRFQ  231
            +WG  +  DT  L + VK+LR+K+ +    P ++ TV G+G + +
Sbjct  183  VWGADYVGDTKTLDVHVKRLRSKIEEDPANPVHLVTVRGLGYKLE  227


>P9WGL8 Sensory transduction protein RegX3 [Mycobacterium tuberculosis 
(strain CDC 1551 / Oshkosh)]
Length=227

 Score = 157 bits (396),  Expect = 4e-51
 Identities = 84/224 (38%), Positives = 131/224 (58%), Gaps = 2/224 (1%)

Query  10   SILIIDDEPQIRKFLDIALRAQGYAVHVAETGMKGLEILASQGADLLILDLGLPDMDGAE  69
            S+LI++DE  +   L   LR +G+   V   G   L      GAD+++LDL LP M G +
Sbjct  3    SVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSGTD  62

Query  70   VLKEMRQWSQIPVIVLSARPDEQQKIKLLDAGANDYVTKPFSIQELCARIRVMFRQ--QP  127
            V K++R  S +PVI+++AR  E  K+  L+ GA+DYVTKP+S +EL ARIR + R+    
Sbjct  63   VCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGDD  122

Query  128  SQSEHNLVFNDGQLFVDVAEHSVKLAGDDVVLTKKEFQLLALLIRHQGKIVTQKQILSEL  187
                 + V   G + +DV  H V + GD + L  KEF LL  L+R+ G+++T+ Q++  +
Sbjct  123  DSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRV  182

Query  188  WGITHEEDTHYLRILVKKLRTKLGDSALQPHYIFTVAGIGLRFQ  231
            WG  +  DT  L + VK+LR+K+      P ++ TV G+G + +
Sbjct  183  WGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLE  226


>P9WGL9 Sensory transduction protein RegX3 [Mycobacterium tuberculosis 
(strain ATCC 25618 / H37Rv)]
Length=227

 Score = 157 bits (396),  Expect = 4e-51
 Identities = 84/224 (38%), Positives = 131/224 (58%), Gaps = 2/224 (1%)

Query  10   SILIIDDEPQIRKFLDIALRAQGYAVHVAETGMKGLEILASQGADLLILDLGLPDMDGAE  69
            S+LI++DE  +   L   LR +G+   V   G   L      GAD+++LDL LP M G +
Sbjct  3    SVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSGTD  62

Query  70   VLKEMRQWSQIPVIVLSARPDEQQKIKLLDAGANDYVTKPFSIQELCARIRVMFRQ--QP  127
            V K++R  S +PVI+++AR  E  K+  L+ GA+DYVTKP+S +EL ARIR + R+    
Sbjct  63   VCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGDD  122

Query  128  SQSEHNLVFNDGQLFVDVAEHSVKLAGDDVVLTKKEFQLLALLIRHQGKIVTQKQILSEL  187
                 + V   G + +DV  H V + GD + L  KEF LL  L+R+ G+++T+ Q++  +
Sbjct  123  DSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRV  182

Query  188  WGITHEEDTHYLRILVKKLRTKLGDSALQPHYIFTVAGIGLRFQ  231
            WG  +  DT  L + VK+LR+K+      P ++ TV G+G + +
Sbjct  183  WGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLE  226


>O07130 Sensory transduction protein RegX3 [Mycobacterium bovis 
(strain ATCC BAA-935 / AF2122/97)]
Length=227

 Score = 157 bits (396),  Expect = 4e-51
 Identities = 84/224 (38%), Positives = 131/224 (58%), Gaps = 2/224 (1%)

Query  10   SILIIDDEPQIRKFLDIALRAQGYAVHVAETGMKGLEILASQGADLLILDLGLPDMDGAE  69
            S+LI++DE  +   L   LR +G+   V   G   L      GAD+++LDL LP M G +
Sbjct  3    SVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSGTD  62

Query  70   VLKEMRQWSQIPVIVLSARPDEQQKIKLLDAGANDYVTKPFSIQELCARIRVMFRQ--QP  127
            V K++R  S +PVI+++AR  E  K+  L+ GA+DYVTKP+S +EL ARIR + R+    
Sbjct  63   VCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGDD  122

Query  128  SQSEHNLVFNDGQLFVDVAEHSVKLAGDDVVLTKKEFQLLALLIRHQGKIVTQKQILSEL  187
                 + V   G + +DV  H V + GD + L  KEF LL  L+R+ G+++T+ Q++  +
Sbjct  123  DSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRV  182

Query  188  WGITHEEDTHYLRILVKKLRTKLGDSALQPHYIFTVAGIGLRFQ  231
            WG  +  DT  L + VK+LR+K+      P ++ TV G+G + +
Sbjct  183  WGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLE  226


>O34903 Uncharacterized transcriptional regulatory protein YkoG 
[Bacillus subtilis (strain 168)]
Length=228

 Score = 154 bits (388),  Expect = 7e-50
 Identities = 87/221 (39%), Positives = 136/221 (62%), Gaps = 7/221 (3%)

Query  11   ILIIDDEPQIRKFLDIALRAQGYAVHVAETGMKGLEILASQGADLLILDLGLPDMDGAEV  70
            ILI++DE +I + L + L  +GY+V +   G +GL+  A  G  L++LD+ LP + G EV
Sbjct  6    ILIVEDEEKIARVLQLELEYEGYSVTIKHNGTEGLDAAAEGGYSLVLLDVMLPGLSGLEV  65

Query  71   LKEMRQW-SQIPVIVLSARPDEQQKIKLLDAGANDYVTKPFSIQELCARIRVMFRQQPSQ  129
            L+ +R+  SQ PVI+L+AR     K+  LD GANDYVTKPF I+EL ARIR   RQ  ++
Sbjct  66   LRRLRKTDSQTPVILLTARDSIPDKVTGLDIGANDYVTKPFEIEELLARIRAALRQNGTK  125

Query  130  SEH---NLVFNDGQLFVDVAEHSVKLAGDDVVLTKKEFQLLALLIRHQGKIVTQKQILSE  186
            +E     L ++D  L V+     V+    +V LT +EF LL  +++H  +++T++QILS 
Sbjct  126  TEDIGTFLTYDD--LRVNEKTREVRRGDKEVELTPREFDLLVYMLKHPQQVLTREQILSS  183

Query  187  LWGITHEEDTHYLRILVKKLRTKLGDSALQPHYIFTVAGIG  227
            +WG  +  DT+ + + ++ +R KL D   +   I T+ G+G
Sbjct  184  VWGFDYIGDTNVVDVYIRYIRKKL-DYPYEKQLIHTIRGVG  223


>Q4A160 Transcriptional regulatory protein WalR [Staphylococcus 
saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 
20229 / NCIMB 8711 / NCTC 7292 / S-41)]
Length=233

 Score = 154 bits (388),  Expect = 8e-50
 Identities = 78/228 (34%), Positives = 137/228 (60%), Gaps = 9/228 (4%)

Query  11   ILIIDDEPQIRKFLDIALRAQGYAVHVAETGMKGLEILASQGADLLILDLGLPDMDGAEV  70
            ++++DDE  I   L+  L+ +GY V  A  G   ++++  +  D+++LD+ LP  DG EV
Sbjct  5    VVVVDDEKPIADILEFNLKKEGYEVFCAYDGNDAVDLIYDEEPDIVLLDIMLPGRDGMEV  64

Query  71   LKEMRQWSQIPVIVLSARPDEQQKIKLLDAGANDYVTKPFSIQELCARIRVMFRQ---QP  127
             +E+R+  ++P+I+L+A+  E  K+  L+ GA+DYVTKPFS +EL AR++   R+   QP
Sbjct  65   CREVRKKYEMPIIMLTAKDSEIDKVLGLELGADDYVTKPFSTRELIARVKANLRRHYSQP  124

Query  128  SQ----SEHNLVFNDGQLFVDVAEHSVKLAGDDVVLTKKEFQLLALLIRHQGKIVTQKQI  183
            +Q    + + +   D  ++ D   +S+K  GDD+ LT +EF+L   L +H G+++T++ +
Sbjct  125  AQEVNDASNEITIKDIVIYPDA--YSIKKRGDDIELTHREFELFHYLSKHMGQVMTREHL  182

Query  184  LSELWGITHEEDTHYLRILVKKLRTKLGDSALQPHYIFTVAGIGLRFQ  231
            L  +WG  +  D   + + +++LR K+ D    P YI T  G+G   Q
Sbjct  183  LQTVWGYDYFGDVRTVDVTIRRLREKIEDDPSHPEYIVTRRGVGYFLQ  230


>A6TXG8 Transcriptional regulatory protein WalR [Staphylococcus 
aureus (strain JH1)]
Length=233

 Score = 153 bits (387),  Expect = 1e-49
 Identities = 78/228 (34%), Positives = 137/228 (60%), Gaps = 9/228 (4%)

Query  11   ILIIDDEPQIRKFLDIALRAQGYAVHVAETGMKGLEILASQGADLLILDLGLPDMDGAEV  70
            ++++DDE  I   L+  L+ +GY V+ A  G   ++++  +  D+++LD+ LP  DG EV
Sbjct  5    VVVVDDEKPIADILEFNLKKEGYDVYCAYDGNDAVDLIYEEEPDIVLLDIMLPGRDGMEV  64

Query  71   LKEMRQWSQIPVIVLSARPDEQQKIKLLDAGANDYVTKPFSIQELCARIRVMFRQ---QP  127
             +E+R+  ++P+I+L+A+  E  K+  L+ GA+DYVTKPFS +EL AR++   R+   QP
Sbjct  65   CREVRKKYEMPIIMLTAKDSEIDKVLGLELGADDYVTKPFSTRELIARVKANLRRHYSQP  124

Query  128  SQSEHN----LVFNDGQLFVDVAEHSVKLAGDDVVLTKKEFQLLALLIRHQGKIVTQKQI  183
            +Q   N    +   D  ++ D   +S+K  G+D+ LT +EF+L   L +H G+++T++ +
Sbjct  125  AQDTGNVTNEITIKDIVIYPDA--YSIKKRGEDIELTHREFELFHYLSKHMGQVMTREHL  182

Query  184  LSELWGITHEEDTHYLRILVKKLRTKLGDSALQPHYIFTVAGIGLRFQ  231
            L  +WG  +  D   + + +++LR K+ D    P YI T  G+G   Q
Sbjct  183  LQTVWGYDYFGDVRTVDVTIRRLREKIEDDPSHPEYIVTRRGVGYFLQ  230


>A7WWQ5 Transcriptional regulatory protein WalR [Staphylococcus 
aureus (strain Mu3 / ATCC 700698)]
Length=233

 Score = 153 bits (387),  Expect = 1e-49
 Identities = 78/228 (34%), Positives = 137/228 (60%), Gaps = 9/228 (4%)

Query  11   ILIIDDEPQIRKFLDIALRAQGYAVHVAETGMKGLEILASQGADLLILDLGLPDMDGAEV  70
            ++++DDE  I   L+  L+ +GY V+ A  G   ++++  +  D+++LD+ LP  DG EV
Sbjct  5    VVVVDDEKPIADILEFNLKKEGYDVYCAYDGNDAVDLIYEEEPDIVLLDIMLPGRDGMEV  64

Query  71   LKEMRQWSQIPVIVLSARPDEQQKIKLLDAGANDYVTKPFSIQELCARIRVMFRQ---QP  127
             +E+R+  ++P+I+L+A+  E  K+  L+ GA+DYVTKPFS +EL AR++   R+   QP
Sbjct  65   CREVRKKYEMPIIMLTAKDSEIDKVLGLELGADDYVTKPFSTRELIARVKANLRRHYSQP  124

Query  128  SQSEHN----LVFNDGQLFVDVAEHSVKLAGDDVVLTKKEFQLLALLIRHQGKIVTQKQI  183
            +Q   N    +   D  ++ D   +S+K  G+D+ LT +EF+L   L +H G+++T++ +
Sbjct  125  AQDTGNVTNEITIKDIVIYPDA--YSIKKRGEDIELTHREFELFHYLSKHMGQVMTREHL  182

Query  184  LSELWGITHEEDTHYLRILVKKLRTKLGDSALQPHYIFTVAGIGLRFQ  231
            L  +WG  +  D   + + +++LR K+ D    P YI T  G+G   Q
Sbjct  183  LQTVWGYDYFGDVRTVDVTIRRLREKIEDDPSHPEYIVTRRGVGYFLQ  230


>Q9RDT5 Transcriptional regulatory protein WalR [Staphylococcus 
aureus]
Length=233

 Score = 153 bits (387),  Expect = 1e-49
 Identities = 78/228 (34%), Positives = 137/228 (60%), Gaps = 9/228 (4%)

Query  11   ILIIDDEPQIRKFLDIALRAQGYAVHVAETGMKGLEILASQGADLLILDLGLPDMDGAEV  70
            ++++DDE  I   L+  L+ +GY V+ A  G   ++++  +  D+++LD+ LP  DG EV
Sbjct  5    VVVVDDEKPIADILEFNLKKEGYDVYCAYDGNDAVDLIYEEEPDIVLLDIMLPGRDGMEV  64

Query  71   LKEMRQWSQIPVIVLSARPDEQQKIKLLDAGANDYVTKPFSIQELCARIRVMFRQ---QP  127
             +E+R+  ++P+I+L+A+  E  K+  L+ GA+DYVTKPFS +EL AR++   R+   QP
Sbjct  65   CREVRKKYEMPIIMLTAKDSEIDKVLGLELGADDYVTKPFSTRELIARVKANLRRHYSQP  124

Query  128  SQSEHN----LVFNDGQLFVDVAEHSVKLAGDDVVLTKKEFQLLALLIRHQGKIVTQKQI  183
            +Q   N    +   D  ++ D   +S+K  G+D+ LT +EF+L   L +H G+++T++ +
Sbjct  125  AQDTGNVTNEITIKDIVIYPDA--YSIKKRGEDIELTHREFELFHYLSKHMGQVMTREHL  182

Query  184  LSELWGITHEEDTHYLRILVKKLRTKLGDSALQPHYIFTVAGIGLRFQ  231
            L  +WG  +  D   + + +++LR K+ D    P YI T  G+G   Q
Sbjct  183  LQTVWGYDYFGDVRTVDVTIRRLREKIEDDPSHPEYIVTRRGVGYFLQ  230


>Q7A8E1 Transcriptional regulatory protein WalR [Staphylococcus 
aureus (strain N315)]
Length=233

 Score = 153 bits (387),  Expect = 1e-49
 Identities = 78/228 (34%), Positives = 137/228 (60%), Gaps = 9/228 (4%)

Query  11   ILIIDDEPQIRKFLDIALRAQGYAVHVAETGMKGLEILASQGADLLILDLGLPDMDGAEV  70
            ++++DDE  I   L+  L+ +GY V+ A  G   ++++  +  D+++LD+ LP  DG EV
Sbjct  5    VVVVDDEKPIADILEFNLKKEGYDVYCAYDGNDAVDLIYEEEPDIVLLDIMLPGRDGMEV  64

Query  71   LKEMRQWSQIPVIVLSARPDEQQKIKLLDAGANDYVTKPFSIQELCARIRVMFRQ---QP  127
             +E+R+  ++P+I+L+A+  E  K+  L+ GA+DYVTKPFS +EL AR++   R+   QP
Sbjct  65   CREVRKKYEMPIIMLTAKDSEIDKVLGLELGADDYVTKPFSTRELIARVKANLRRHYSQP  124

Query  128  SQSEHN----LVFNDGQLFVDVAEHSVKLAGDDVVLTKKEFQLLALLIRHQGKIVTQKQI  183
            +Q   N    +   D  ++ D   +S+K  G+D+ LT +EF+L   L +H G+++T++ +
Sbjct  125  AQDTGNVTNEITIKDIVIYPDA--YSIKKRGEDIELTHREFELFHYLSKHMGQVMTREHL  182

Query  184  LSELWGITHEEDTHYLRILVKKLRTKLGDSALQPHYIFTVAGIGLRFQ  231
            L  +WG  +  D   + + +++LR K+ D    P YI T  G+G   Q
Sbjct  183  LQTVWGYDYFGDVRTVDVTIRRLREKIEDDPSHPEYIVTRRGVGYFLQ  230


>Q2G2U6 Transcriptional regulatory protein WalR [Staphylococcus 
aureus (strain NCTC 8325 / PS 47)]
Length=233

 Score = 153 bits (387),  Expect = 1e-49
 Identities = 78/228 (34%), Positives = 137/228 (60%), Gaps = 9/228 (4%)

Query  11   ILIIDDEPQIRKFLDIALRAQGYAVHVAETGMKGLEILASQGADLLILDLGLPDMDGAEV  70
            ++++DDE  I   L+  L+ +GY V+ A  G   ++++  +  D+++LD+ LP  DG EV
Sbjct  5    VVVVDDEKPIADILEFNLKKEGYDVYCAYDGNDAVDLIYEEEPDIVLLDIMLPGRDGMEV  64

Query  71   LKEMRQWSQIPVIVLSARPDEQQKIKLLDAGANDYVTKPFSIQELCARIRVMFRQ---QP  127
             +E+R+  ++P+I+L+A+  E  K+  L+ GA+DYVTKPFS +EL AR++   R+   QP
Sbjct  65   CREVRKKYEMPIIMLTAKDSEIDKVLGLELGADDYVTKPFSTRELIARVKANLRRHYSQP  124

Query  128  SQSEHN----LVFNDGQLFVDVAEHSVKLAGDDVVLTKKEFQLLALLIRHQGKIVTQKQI  183
            +Q   N    +   D  ++ D   +S+K  G+D+ LT +EF+L   L +H G+++T++ +
Sbjct  125  AQDTGNVTNEITIKDIVIYPDA--YSIKKRGEDIELTHREFELFHYLSKHMGQVMTREHL  182

Query  184  LSELWGITHEEDTHYLRILVKKLRTKLGDSALQPHYIFTVAGIGLRFQ  231
            L  +WG  +  D   + + +++LR K+ D    P YI T  G+G   Q
Sbjct  183  LQTVWGYDYFGDVRTVDVTIRRLREKIEDDPSHPEYIVTRRGVGYFLQ  230


>Q4LAJ9 Transcriptional regulatory protein WalR [Staphylococcus 
haemolyticus (strain JCSC1435)]
Length=233

 Score = 152 bits (385),  Expect = 2e-49
 Identities = 77/228 (34%), Positives = 138/228 (61%), Gaps = 9/228 (4%)

Query  11   ILIIDDEPQIRKFLDIALRAQGYAVHVAETGMKGLEILASQGADLLILDLGLPDMDGAEV  70
            ++++DDE  I   L+  L+ +GY V+ A  G   ++++  +  D+++LD+ LP  DG EV
Sbjct  5    VVVVDDEKPIADILEFNLKKEGYDVYCAYDGNDAVDLIYEEEPDIVLLDIMLPGRDGMEV  64

Query  71   LKEMRQWSQIPVIVLSARPDEQQKIKLLDAGANDYVTKPFSIQELCARIRVMFRQ---QP  127
             +E+R+  ++P+I+L+A+  E  K+  L+ GA+DYVTKPFS +EL AR++   R+   QP
Sbjct  65   CREVRKKFEMPIIMLTAKDSEIDKVLGLELGADDYVTKPFSTRELIARVKANLRRHYSQP  124

Query  128  SQ----SEHNLVFNDGQLFVDVAEHSVKLAGDDVVLTKKEFQLLALLIRHQGKIVTQKQI  183
            +Q    + + +   D  ++ D   +S+K  G+D+ LT +EF+L   L +H G+++T++ +
Sbjct  125  AQEVSGTTNEITIKDIVIYPDA--YSIKKRGEDIELTHREFELFHYLSKHMGQVMTREHL  182

Query  184  LSELWGITHEEDTHYLRILVKKLRTKLGDSALQPHYIFTVAGIGLRFQ  231
            L  +WG  +  D   + + +++LR K+ D    P YI T  G+G   Q
Sbjct  183  LQTVWGYDYFGDVRTVDVTIRRLREKIEDDPSHPEYIVTRRGVGYFLQ  230


>Q5HK18 Transcriptional regulatory protein WalR [Staphylococcus 
epidermidis (strain ATCC 35984 / RP62A)]
Length=233

 Score = 152 bits (385),  Expect = 2e-49
 Identities = 77/228 (34%), Positives = 138/228 (61%), Gaps = 9/228 (4%)

Query  11   ILIIDDEPQIRKFLDIALRAQGYAVHVAETGMKGLEILASQGADLLILDLGLPDMDGAEV  70
            ++++DDE  I   L+  L+ +GY V+ A  G   ++++  +  D+++LD+ LP  DG EV
Sbjct  5    VVVVDDEKPIADILEFNLKKEGYDVYCAYDGNDAVDLIYEEEPDIVLLDIMLPGRDGMEV  64

Query  71   LKEMRQWSQIPVIVLSARPDEQQKIKLLDAGANDYVTKPFSIQELCARIRVMFRQ---QP  127
             +E+R+  ++P+I+L+A+  E  K+  L+ GA+DYVTKPFS +EL AR++   R+   QP
Sbjct  65   CREVRKKYEMPIIMLTAKDSEIDKVLGLELGADDYVTKPFSTRELIARVKANLRRHYSQP  124

Query  128  SQ----SEHNLVFNDGQLFVDVAEHSVKLAGDDVVLTKKEFQLLALLIRHQGKIVTQKQI  183
            +Q    + + +   D  ++ D   +S+K  G+D+ LT +EF+L   L +H G+++T++ +
Sbjct  125  AQEVSGATNEITIKDIVIYPDA--YSIKKRGEDIELTHREFELFHYLSKHMGQVMTREHL  182

Query  184  LSELWGITHEEDTHYLRILVKKLRTKLGDSALQPHYIFTVAGIGLRFQ  231
            L  +WG  +  D   + + +++LR K+ D    P YI T  G+G   Q
Sbjct  183  LQTVWGYDYFGDVRTVDVTIRRLREKIEDDPSHPEYIVTRRGVGYFLQ  230


>Q8CQK0 Transcriptional regulatory protein WalR [Staphylococcus 
epidermidis (strain ATCC 12228 / FDA PCI 1200)]
Length=233

 Score = 152 bits (385),  Expect = 2e-49
 Identities = 77/228 (34%), Positives = 138/228 (61%), Gaps = 9/228 (4%)

Query  11   ILIIDDEPQIRKFLDIALRAQGYAVHVAETGMKGLEILASQGADLLILDLGLPDMDGAEV  70
            ++++DDE  I   L+  L+ +GY V+ A  G   ++++  +  D+++LD+ LP  DG EV
Sbjct  5    VVVVDDEKPIADILEFNLKKEGYDVYCAYDGNDAVDLIYEEEPDIVLLDIMLPGRDGMEV  64

Query  71   LKEMRQWSQIPVIVLSARPDEQQKIKLLDAGANDYVTKPFSIQELCARIRVMFRQ---QP  127
             +E+R+  ++P+I+L+A+  E  K+  L+ GA+DYVTKPFS +EL AR++   R+   QP
Sbjct  65   CREVRKKYEMPIIMLTAKDSEIDKVLGLELGADDYVTKPFSTRELIARVKANLRRHYSQP  124

Query  128  SQ----SEHNLVFNDGQLFVDVAEHSVKLAGDDVVLTKKEFQLLALLIRHQGKIVTQKQI  183
            +Q    + + +   D  ++ D   +S+K  G+D+ LT +EF+L   L +H G+++T++ +
Sbjct  125  AQEVSGATNEITIKDIVIYPDA--YSIKKRGEDIELTHREFELFHYLSKHMGQVMTREHL  182

Query  184  LSELWGITHEEDTHYLRILVKKLRTKLGDSALQPHYIFTVAGIGLRFQ  231
            L  +WG  +  D   + + +++LR K+ D    P YI T  G+G   Q
Sbjct  183  LQTVWGYDYFGDVRTVDVTIRRLREKIEDDPSHPEYIVTRRGVGYFLQ  230


>P37478 Transcriptional regulatory protein WalR [Bacillus subtilis 
(strain 168)]
Length=235

 Score = 151 bits (382),  Expect = 6e-49
 Identities = 81/226 (36%), Positives = 135/226 (60%), Gaps = 13/226 (6%)

Query  11   ILIIDDEPQIRKFLDIALRAQGYAVHVAETGMKGLEILASQGADLLILDLGLPDMDGAEV  70
            IL++DDE  I   L+  LR +GY VH A  G + +E++     DL++LD+ LP+ DG EV
Sbjct  5    ILVVDDEKPIADILEFNLRKEGYEVHCAHDGNEAVEMVEELQPDLILLDIMLPNKDGVEV  64

Query  71   LKEMRQWSQIPVIVLSARPDEQQKIKLLDAGANDYVTKPFSIQELCARIRVMFRQQ----  126
             +E+R+   +P+I+L+A+  E  K+  L+ GA+DYVTKPFS +EL AR++   R+Q    
Sbjct  65   CREVRKKYDMPIIMLTAKDSEIDKVIGLEIGADDYVTKPFSTRELLARVKANLRRQLTTA  124

Query  127  -----PSQSEHNLVFNDGQLFVDVAEHSVKLAGDDVVLTKKEFQLLALLIRHQGKIVTQK  181
                 PS +E ++    G L +    + V    + + LT +EF+LL  L +H G+++T++
Sbjct  125  PAEEEPSSNEIHI----GSLVIFPDAYVVSKRDETIELTHREFELLHYLAKHIGQVMTRE  180

Query  182  QILSELWGITHEEDTHYLRILVKKLRTKLGDSALQPHYIFTVAGIG  227
             +L  +WG  +  D   + + V++LR K+ D+   P++I T  G+G
Sbjct  181  HLLQTVWGYDYFGDVRTVDVTVRRLREKIEDNPSHPNWIVTRRGVG  226


>P28835 Probable transcriptional regulator ycf27 [Porphyridium 
aerugineum]
Length=240

 Score = 149 bits (376),  Expect = 6e-48
 Identities = 93/228 (41%), Positives = 130/228 (57%), Gaps = 7/228 (3%)

Query  11   ILIIDDEPQIRKFLDIALRAQGYAVHVAETGMKGLEILASQGADLLILDLGLPDMDGAEV  70
            IL+IDDE  IR+ L+  L   GY V  A  G + L I   +  +L++LDL +P +DG  V
Sbjct  6    ILVIDDEASIRRILETRLSIIGYDVISAADGEEALSIFKREHPNLVVLDLMMPKLDGYGV  65

Query  71   LKEMRQWSQIPVIVLSARPDEQQKIKLLDAGANDYVTKPFSIQELCARIR-VMFRQQPSQ  129
             +E+R+ S +P+I+L+A  D   +I  L+ GA+DY+ KPFS +EL ARIR V+ R   + 
Sbjct  66   CQELRKESDVPIIMLTALSDVSDRITGLELGADDYIVKPFSPKELEARIRSVLRRVDKAS  125

Query  130  SEHNL----VFNDGQLFVDVAEHSVKLAGDDVVLTKKEFQLLALLIRHQGKIVTQKQILS  185
            S +NL    + N G L +DV +H V    + V LT  EF LL LLI   G+  ++  IL 
Sbjct  126  SNNNLPNSGIINIGFLKIDVNKHQVYKNNERVRLTGMEFSLLELLISKAGQPFSRATILQ  185

Query  186  ELWGITHEE--DTHYLRILVKKLRTKLGDSALQPHYIFTVAGIGLRFQ  231
            E+WG T E   DT  + + + +LR KL D    P  I T  G G  FQ
Sbjct  186  EVWGYTAERQVDTRVVDVHISRLRAKLEDDPSNPDLILTARGTGYLFQ  233


>P76340 Transcriptional regulatory protein HprR [Escherichia coli 
(strain K12)]
Length=223

 Score = 145 bits (365),  Expect = 2e-46
 Identities = 81/220 (37%), Positives = 121/220 (55%), Gaps = 4/220 (2%)

Query  11   ILIIDDEPQIRKFLDIALRAQGYAVHVAETGMKGLEILASQGADLLILDLGLPDMDGAEV  70
            IL+I+D  + ++++   L   GY +     G  GL +       L+ILD+ LP MDG ++
Sbjct  3    ILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGLYLALKDDYALIILDIMLPGMDGWQI  62

Query  71   LKEMRQWSQIPVIVLSARPDEQQKIKLLDAGANDYVTKPFSIQELCARIRVMFRQQPSQS  130
            L+ +R   Q PVI L+AR     +++ LD+GANDY+ KPFS  EL AR+R   RQ  +  
Sbjct  63   LQTLRTAKQTPVICLTARDSVDDRVRGLDSGANDYLVKPFSFSELLARVRAQLRQHHAL-  121

Query  131  EHNLVFNDGQLFVDVAEHSVKLAGDDVVLTKKEFQLLALLIRHQGKIVTQKQILSELWGI  190
              N       L +D   HSV      + LT+KEFQLL LL    G+I+ +  I SE+WGI
Sbjct  122  --NSTLEISGLRMDSVSHSVSRDNISITLTRKEFQLLWLLASRAGEIIPRTVIASEIWGI  179

Query  191  THEEDTHYLRILVKKLRTKLGDSALQPHYIFTVAGIGLRF  230
              + DT+ + + +++LR K+ D       I T+ G+G  F
Sbjct  180  NFDSDTNTVDVAIRRLRAKV-DDPFPEKLIATIRGMGYSF  218



Lambda      K        H        a         alpha
   0.324    0.139    0.397    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 767715


  Database: 5cc8bd58823b496b7193d20f0d5691db.SwissProt.fasta
    Posted date:  May 20, 2024  2:23 AM
  Number of letters in database: 4,840
  Number of sequences in database:  21



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40