BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: b9ff872bc38073d04683259d355300da.SwissProt.fasta
13 sequences; 8,836 total letters
Query= ACIAD2975
Length=882
Score E
Sequences producing significant alignments: (Bits) Value
P21865 Sensor protein KdpD [Escherichia coli (strain K12)] 433 2e-141
P94608 Sensor protein KdpD [Clostridium acetobutylicum (strain AT... 423 2e-137
P9WGL2 Sensor protein KdpD [Mycobacterium tuberculosis (strain CD... 367 8e-117
P9WGL3 Sensor protein KdpD [Mycobacterium tuberculosis (strain AT... 367 1e-116
Q2FWH7 Sensor histidine kinase KdpD [Staphylococcus aureus (strai... 353 2e-111
P73870 Putative sensor protein KdpD [Synechocystis sp. (strain PC... 234 1e-72
O34971 Sensor protein KdpD [Rathayibacter rathayi] 244 1e-71
P23545 Alkaline phosphatase synthesis sensor protein PhoR [Bacill... 114 2e-29
P35164 Sensor histidine kinase ResE [Bacillus subtilis (strain 168)] 111 2e-28
Q45614 Sensor histidine kinase WalK [Bacillus subtilis (strain 168)] 104 3e-26
Q06904 Adaptive-response sensory kinase SasA [Synechococcus elong... 100 9e-26
P20169 Drug sensory protein A [Synechocystis sp. (strain PCC 6803... 99.4 2e-24
A0QR01 Sensor-like histidine kinase SenX3 [Mycolicibacterium smeg... 96.3 3e-24
>P21865 Sensor protein KdpD [Escherichia coli (strain K12)]
Length=894
Score = 433 bits (1114), Expect = 2e-141
Identities = 288/890 (32%), Positives = 463/890 (52%), Gaps = 41/890 (5%)
Query 11 DAWLAHTQREQSGRLTIFLGAAPGVGKTYAMLTRAHELMQQGKQVVVGVVETHGRADTAR 70
D L T G+L +F GA GVGKT+AML A L QG +VVGVVETHGR DTA
Sbjct 11 DRLLEQTAAPHRGKLKVFFGACAGVGKTWAMLAEAQRLRAQGLDIVVGVVETHGRKDTAA 70
Query 71 LIAGLNVIPRRVVEYQDRKLEEMDLDQILHIKPEIVLVDELAHRNVPGSRHEYRWQDVNE 130
++ GL V+P + Y+ R + E DLD L +P ++L+DELAH N PGSRH RWQD+ E
Sbjct 71 MLEGLAVLPLKRQAYRGRHISEFDLDAALARRPALILMDELAHSNAPGSRHPKRWQDIEE 130
Query 131 ILDAGINVYSTLNIQHLESLNDVVYQITGIRVTETVPDALLKRLKDIRLVDLPVPELLER 190
+L+AGI+V++T+N+QHLESLNDVV +TGI+V ETVPD D+ LVDLP +L +R
Sbjct 131 LLEAGIDVFTTVNVQHLESLNDVVSGVTGIQVRETVPDPFFDAADDVVLVDLPPDDLRQR 190
Query 191 MKHGKIYLDDMAPHALQGFFKPAHLTALRDLAIQTVAGQVEIDYR--EKSVAQGRIVPIQ 248
+K GK+Y+ A A++ FF+ +L ALR+LA++ A +V+ R + ++ +
Sbjct 191 LKEGKVYIAGQAERAIEHFFRKGNLIALRELALRRTADRVDEQMRAWRGHPGEEKVWHTR 250
Query 249 NHVMLAIDGSVFAEDLVRRAHRIAERRNATWSVISIQK---SKTSSAQSLAVSKAFNLAR 305
+ ++L I + +E LVR A R+A R + W + ++ + + A+ A LA+
Sbjct 251 DAILLCIGHNTGSEKLVRAAARLASRLGSVWHAVYVETPALHRLPEKKRRAILSALRLAQ 310
Query 306 KLGADTYLLYSHQIAPTILQAAYDYGASNILLGKSPKKTLLERIRSEHIADQLLDKQHPF 365
+LGA+T L +++ A ++ I+LG+ + R E AD+L
Sbjct 311 ELGAETATLSDPAEEKAVVRYAREHNLGKIILGRPASRRWWRR---ETFADRLARIAPDL 367
Query 366 EITFV---QPLKATSYSAQAAVPDQTWLQQYTHFQARELIESVLIVLAGFIIAVISDHFI 422
+ V +P T +A PD + Q + + + + +IA+
Sbjct 368 DQVLVALDEPPARTINNA----PDNRSFKDKWRVQIQGCVVAAALCAVITLIAMQWLMAF 423
Query 423 GYTELALIFVVTVLVVAMRARMLMTLLSVFVCFLLYNYFFIEPRFTFRISAERGVITIVI 482
L +++++ V+VVA+ ++++ + + ++ FFI PR T +S + ++T +
Sbjct 424 DAANLVMLYLLGVVVVALFYGRWPSVVATVINVVSFDLFFIAPRGTLAVSDVQYLLTFAV 483
Query 483 FILSALLVGRLANQLRAQVLSLRVANSVSLQLQELERKLSTCVDIAQVLSVSKQHLESAL 542
+ L++G L +R Q R + L E+ + L+ + + S+Q + S
Sbjct 484 MLTVGLVIGNLTAGVRYQARVARYREQRTRHLYEMSKALAVGRSPQDIAATSEQFIASTF 543
Query 543 KATAWLRVSELEAGDRSQLNHK------DHIAADWTQKNGQPCGRFTNTLTQSEWWFNPL 596
A + + + + + G L H D A W+ G P G T+TL + PL
Sbjct 544 HARSQVLLPD-DNGKLQPLTHPQGMTPWDDAIAQWSFDKGLPAGAGTDTLPGVPYQILPL 602
Query 597 NLAGE--HGVIALRFHPDLDVISFEQQRLAELMIEDIAQTLARVLLSFQLENSRVVAETE 654
+GE +G++ + ++ EQQRL E +A L R+ L+ E +R+ +E E
Sbjct 603 K-SGEKTYGLVVVEPGNLRQLMIPEQQRLLETFTLLVANALERLTLTASEEQARMASERE 661
Query 655 KLRSALLSSVSHDLRSPLAAMIGSADTLKYYSVQLSDTDRDSLLDTIHIEGERLD--RYI 712
++R+ALL+++SHDLR+PL + G A+ L ++ L+ I L+ R +
Sbjct 662 QIRNALLAALSHDLRTPLTVLFGQAEIL---TLDLASEGSPHARQASEIRQHVLNTTRLV 718
Query 713 QNLLDMTRLGHQGLTLSRAWISIDELIGSATQRLKRYQPNIQ--IDTHIAPNLPALYVHP 770
NLLDM R+ G L + W++++E++GSA Q L +P + I+ + L ++V
Sbjct 719 NNLLDMARIQSGGFNLKKEWLTLEEVVGSALQML---EPGLSSPINLSLPEPLTLIHVDG 775
Query 771 ALIEQALFNVLENAAKFSPDAVPIQVKISAVDEQFQIDIIDLGIGIPEQEREQIFDMFYT 830
L E+ L N+LENA K++ I + E Q+D+ D G G+P + + IFD F
Sbjct 776 PLFERVLINLLENAVKYAGAQAEIGIDAHVEGENLQLDVWDNGPGLPPGQEQTIFDKF-- 833
Query 831 MQRGDRGKT--GTGLGLAIVKAIIGAHMGSIEAMAGPYGQGTQIRIRLPQ 878
RG++ G GLGLAI +AI+ H G+I A P G G R+ LPQ
Sbjct 834 -ARGNKESAVPGVGLGLAICRAIVDVHGGTITAFNRPEG-GACFRVTLPQ 881
>P94608 Sensor protein KdpD [Clostridium acetobutylicum (strain
ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)]
Length=900
Score = 423 bits (1087), Expect = 2e-137
Identities = 272/901 (30%), Positives = 484/901 (54%), Gaps = 39/901 (4%)
Query 1 LMQIDRNEKADAWLAHTQREQSGRLTIFLGAAPGVGKTYAMLTRAHELMQQGKQVVVGVV 60
L +ID+ EK + G+L IF G A GVGKTYAML AH + + GK +V+G +
Sbjct 14 LNKIDKEEK---------NKNRGKLKIFFGYAAGVGKTYAMLRAAHYMKELGKDIVIGYI 64
Query 61 ETHGRADTARLIAGLNVIPRRVVEYQDRKLEEMDLDQILHIKPEIVLVDELAHRNVPGSR 120
E H R DT L GL IP + ++Y+ L E D+D+ L KPEI+LVDELAH N R
Sbjct 65 EPHARMDTMSLTKGLPQIPVKNIDYKGVILREFDVDKALLRKPEIILVDELAHTNAKSQR 124
Query 121 HEYRWQDVNEILDAGINVYSTLNIQHLESLNDVVYQITGIRVTETVPDALLKRLKDIRLV 180
++ RW+D+ E+LDAGI+VY+TLN+QH+ESLND+V IT + V ET+PD + + L+
Sbjct 125 NKKRWKDIEELLDAGIDVYTTLNVQHIESLNDIVANITHVSVRETIPDKVFDDADKVELI 184
Query 181 DLPVPELLERMKHGKIYLDDMAPHALQGFFKPAHLTALRDLAIQTVAGQV--EIDYREKS 238
D+ ELL+R GKIY + A FF +L ALR++A++ A +V EI+ S
Sbjct 185 DIEPDELLKRFTDGKIYRKEQVKRAFNNFFTKNNLYALREIALRRTADRVNFEIEIARLS 244
Query 239 VAQGRIVPIQNHVMLAIDGSVFAEDLVRRAHRIAERRNATWSVISIQKSKT-SSAQSLAV 297
Q ++ + ++ I S + ++R A R+AE ++ W + + ++ A +
Sbjct 245 KGQITVMATSDQILACIGTSPSSARIIRTAARMAESYHSKWIALYVDTGRSLGKADKETL 304
Query 298 SKAFNLARKLGADTYLLYSHQIAPTILQAAYDYGASNILLGKSPKKT-LLERIRSEHIAD 356
+ FNL LG + ++ +A I++ A + I++GK+ K+T L ++ + D
Sbjct 305 NANFNLVELLGGELVTVHGENVADQIIRYAELRNTTKIVIGKNHKRTGTLLHFYAKDVVD 364
Query 357 QLLDKQHPFEITFVQPLKATSYSAQAAVPDQTWLQQYTHFQARELIESVLIVLAGFIIAV 416
+L+D ++ ++ P + + ++ + +Q ++++++++I+ IA
Sbjct 365 KLMDSNSYIDV-YMIPNSSYYRDHKNSILSKISIQH--KGSVKDVLKAIIIMAITTDIAE 421
Query 417 ISDHFIGYTE--LALIFVVTVLVVAMRAR-MLMTLLSVFVCFLLYNYFFIEPRFTFRISA 473
+ ++G+ + + +IF++ V++V M + +M ++S L++NY F EP+ +F +
Sbjct 422 LFS-YMGFKDVNVIMIFILGVIIVYMATKGQIMGIISSIAAVLVFNYRFTEPKNSFIVYD 480
Query 474 ERGVITIVIFILSALLVGRLANQLRAQVLSLRVANSVSLQLQELERKLSTCVDIAQVLSV 533
+ ++T I ++ A ++G L N+++ + + + L + KL + V ++V+S+
Sbjct 481 KSYLVTFPIMMIVAFIIGSLTNKVQKEAQDSNMREKRTQTLYIVSGKLLSAVGTSEVVSI 540
Query 534 SKQHLESALK--------------ATAWLRVSELEAGDRSQLNHKDHIAADWTQKNGQPC 579
+++ + +T ++ + A + ++ ++ AA WT NG+
Sbjct 541 GIKYISRLVNRNVICYLADTSNKLSTPFVYKKDKGAKEEIIMSKDENAAAYWTFLNGKES 600
Query 580 GRFTNTLTQSEWWFNPLNLAGE-HGVIALRFHPDLDVISFEQQRLAELMIEDIAQTLARV 638
G T+T +++ ++ P+ + + GVI + + +++ + + + IA L R
Sbjct 601 GCGTSTFYRAKGYYIPIKIKNKVLGVIGVSC--PSGPLRPQKKAVVDTVTGQIAIALDRE 658
Query 639 LLSFQLENSRVVAETEKLRSALLSSVSHDLRSPLAAMIGSADTLKYYSVQLSDTDRDSLL 698
+LS + E S+V E E+LRS LL S+SHDLRSPLA + G+A T+ + + + L+
Sbjct 659 ILSKEQEKSKVEIERERLRSNLLRSISHDLRSPLAGIKGAASTILENGELIDEKRKQELI 718
Query 699 DTIHIEGERLDRYIQNLLDMTRLGHQGLTLSRAWISIDELIGSATQRLKRYQPNIQIDTH 758
+ I+ + E L R I+NLL MT+ + + ++E++ A QR +Y N +I
Sbjct 719 NGIYEDTEWLIRLIENLLSMTKFDEGNTKIKKDVELVEEVVSEAVQRSSKYFKNHKIKVS 778
Query 759 IAPNLPALYVHPALIEQALFNVLENAAKFSPDAVPIQVKISAVDEQFQIDIIDLGIGIPE 818
+ ++ + + +LIEQ + N+L+NA+KFSP I++K+ + +IID G GI E
Sbjct 779 VPEDVIMVSMDGSLIEQVIINLLDNASKFSPKGSTIEIKVYEKKKDVVFEIIDEGQGISE 838
Query 819 QEREQIFDMFYTM-QRGDRGKTGTGLGLAIVKAIIGAHMGSIEAMAGPYGQGTQIRIRLP 877
IFD F+T + + G GLGLAI K+I+ AH G IEA+ G G + +P
Sbjct 839 DILPNIFDRFFTNGSKISDSRRGVGLGLAICKSIVEAHGGKIEAVNKGSG-GAIFKFNIP 897
Query 878 Q 878
+
Sbjct 898 K 898
>P9WGL2 Sensor protein KdpD [Mycobacterium tuberculosis (strain
CDC 1551 / Oshkosh)]
Length=860
Score = 367 bits (943), Expect = 8e-117
Identities = 270/876 (31%), Positives = 436/876 (50%), Gaps = 68/876 (8%)
Query 13 WLAHTQREQSGRLTIFLGAAPGVGKTYAMLTRAHELMQQGKQVVVGVVETHGRADTARLI 72
W+ + G+L I+LGAAPGVGKTYAML AH +++G VV VVETHGR TA+L+
Sbjct 17 WMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLL 76
Query 73 AGLNVIPRRVVEYQDRKLEEMDLDQILHIKPEIVLVDELAHRNVPGSRHEYRWQDVNEIL 132
G+ +IP R VEY+ + E+D++ +L P++VLVDELAH N PGS++ RWQDV EIL
Sbjct 77 EGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEIL 136
Query 133 DAGINVYSTLNIQHLESLNDVVYQITGIRVTETVPDALLKRLKDIRLVDLPVPELLERMK 192
DAGI V ST+NIQHLE LNDVV QITGI E +PD +++ + LVD+ L R+
Sbjct 137 DAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLA 196
Query 193 HGKIYLDDMAPHALQGFFKPAHLTALRDLAIQTVAGQVEIDYREKSVAQGRIV---PIQN 249
HG +Y + AL +F+ +LTALR++A+ +A QV+ EK A +I +
Sbjct 197 HGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAAL-EKYRADKKITATWEARE 255
Query 250 HVMLAIDGSVFAEDLVRRAHRIAERRNATWSVIS-IQKSKTSSAQSLAVSKAFNLARKLG 308
V++A+ G +E LVRRA RIA + +A V+ I+ + + + + LA LG
Sbjct 256 RVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLG 315
Query 309 ADTYLLYSHQIAPTILQAAYDYGASNILLGKSPKKTLLERIRSEHIADQLLDKQHPFEIT 368
A + + + +L A + A+ +++G S +++ R+ E I + + + ++
Sbjct 316 ATMHTVVGDDVPTALLDFAREMNATQLVVGTS-RRSRWARLFDEGIGARTVQESGGIDVH 374
Query 369 FVQPLKATSYSAQAAVPDQTWLQQYTHFQARELIESVLIVLAGFIIAVISDHFIGYTELA 428
V A+ S + V + + + A ++ SV+ I D F+G +
Sbjct 375 MVTHPAASRASGWSRVSPRE--RHIASWLAALVVPSVICA----ITVAWLDRFMGIGGES 428
Query 429 LIFVVTVLVVAMRARMLMTLLSVFVCFLLYNYFFIEPRFTFRISAERGVITIVIFILSAL 488
+F + VL+VA+ + LS + +L NYF EPR+T+ I+ +T + + A+
Sbjct 429 ALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAV 488
Query 489 LVGRLANQLRAQVLSLRVANSVSLQLQELERKLSTCVDIAQVLSVSKQHLESALKATAWL 548
V L + ++ R A+ + L + D+A +L ++ +A L
Sbjct 489 AVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ--RAVTML 546
Query 549 RVSELEAGDRSQLNHKDHIAADWTQKNGQPCGRFTNTLT-----QSEWWFNPLNLAGEHG 603
RV R + + +A T PC + T E+W + +AG
Sbjct 547 RV-------RQGASTGETVACVGT----NPCRDVDSADTAIEVGDDEFW---MLMAGRK- 591
Query 604 VIALRFHPDLDVISFEQQRLAELMIEDIAQTLARVLLSFQLENSRVVAETEKLRSALLSS 663
++ +R+ + A + + L+ + + +A ++LR +LLS+
Sbjct 592 ------------LAARDRRVLTAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSA 639
Query 664 VSHDLRSPLAAMIGSADTLKYYSVQLSDTDRDSLLDTIHIEGERLDRYIQNLLDMTRL-- 721
VSHDLR+PLAA + +L+ V S D LL TI ++L + NLLD +RL
Sbjct 640 VSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAA 699
Query 722 ---------GHQGLTLSRAWISIDELIGSATQRLKRYQPNIQIDTHIAPNLPALYVHPAL 772
+ + RA +SI + AT + +++D A L
Sbjct 700 GVIRPQLRRAYLEEAVQRALVSIGK---GATGFYRSGIDRVKVDVGDA----VAMADAGL 752
Query 773 IEQALFNVLENAAKFSPDAVPIQVKISAVDEQFQIDIIDLGIGIPEQEREQIFDMFYTMQ 832
+E+ L N+++NA +++PD V ++V V E+ I++ID G G+P EQ+F F +
Sbjct 753 LERVLANLIDNALRYAPDCV-VRVNAGRVRERVLINVIDEGPGVPRGTEEQLFAPF--QR 809
Query 833 RGDR-GKTGTGLGLAIVKAIIGAHMGSIEAMAGPYG 867
GD TG GLG+++ + + A G+I A P G
Sbjct 810 PGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGG 845
>P9WGL3 Sensor protein KdpD [Mycobacterium tuberculosis (strain
ATCC 25618 / H37Rv)]
Length=860
Score = 367 bits (942), Expect = 1e-116
Identities = 270/876 (31%), Positives = 436/876 (50%), Gaps = 68/876 (8%)
Query 13 WLAHTQREQSGRLTIFLGAAPGVGKTYAMLTRAHELMQQGKQVVVGVVETHGRADTARLI 72
W+ + G+L I+LGAAPGVGKTYAML AH +++G VV VVETHGR TA+L+
Sbjct 17 WMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLL 76
Query 73 AGLNVIPRRVVEYQDRKLEEMDLDQILHIKPEIVLVDELAHRNVPGSRHEYRWQDVNEIL 132
G+ +IP R VEY+ + E+D++ +L P++VLVDELAH N PGS++ RWQDV EIL
Sbjct 77 EGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEIL 136
Query 133 DAGINVYSTLNIQHLESLNDVVYQITGIRVTETVPDALLKRLKDIRLVDLPVPELLERMK 192
DAGI V ST+NIQHLE LNDVV QITGI E +PD +++ + LVD+ L R+
Sbjct 137 DAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLA 196
Query 193 HGKIYLDDMAPHALQGFFKPAHLTALRDLAIQTVAGQVEIDYREKSVAQGRIV---PIQN 249
HG +Y + AL +F+ +LTALR++A+ +A QV+ EK A +I +
Sbjct 197 HGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAAL-EKYRADKKITATWEARE 255
Query 250 HVMLAIDGSVFAEDLVRRAHRIAERRNATWSVIS-IQKSKTSSAQSLAVSKAFNLARKLG 308
V++A+ G +E LVRRA RIA + +A V+ I+ + + + + LA LG
Sbjct 256 RVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLG 315
Query 309 ADTYLLYSHQIAPTILQAAYDYGASNILLGKSPKKTLLERIRSEHIADQLLDKQHPFEIT 368
A + + + +L A + A+ +++G S +++ R+ E I + + + ++
Sbjct 316 ATMHTVVGDDVPTALLDFAREMNATQLVVGTS-RRSRWARLFDEGIGARTVQEPGGIDVH 374
Query 369 FVQPLKATSYSAQAAVPDQTWLQQYTHFQARELIESVLIVLAGFIIAVISDHFIGYTELA 428
V A+ S + V + + + A ++ SV+ I D F+G +
Sbjct 375 MVTHPAASRASGWSRVSPRE--RHIASWLAALVVPSVICA----ITVAWLDRFMGIGGES 428
Query 429 LIFVVTVLVVAMRARMLMTLLSVFVCFLLYNYFFIEPRFTFRISAERGVITIVIFILSAL 488
+F + VL+VA+ + LS + +L NYF EPR+T+ I+ +T + + A+
Sbjct 429 ALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAV 488
Query 489 LVGRLANQLRAQVLSLRVANSVSLQLQELERKLSTCVDIAQVLSVSKQHLESALKATAWL 548
V L + ++ R A+ + L + D+A +L ++ +A L
Sbjct 489 AVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ--RAVTML 546
Query 549 RVSELEAGDRSQLNHKDHIAADWTQKNGQPCGRFTNTLT-----QSEWWFNPLNLAGEHG 603
RV R + + +A T PC + T E+W + +AG
Sbjct 547 RV-------RQGASTGETVACVGT----NPCRDVDSADTAIEVGDDEFW---MLMAGRK- 591
Query 604 VIALRFHPDLDVISFEQQRLAELMIEDIAQTLARVLLSFQLENSRVVAETEKLRSALLSS 663
++ +R+ + A + + L+ + + +A ++LR +LLS+
Sbjct 592 ------------LAARDRRVLTAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSA 639
Query 664 VSHDLRSPLAAMIGSADTLKYYSVQLSDTDRDSLLDTIHIEGERLDRYIQNLLDMTRL-- 721
VSHDLR+PLAA + +L+ V S D LL TI ++L + NLLD +RL
Sbjct 640 VSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAA 699
Query 722 ---------GHQGLTLSRAWISIDELIGSATQRLKRYQPNIQIDTHIAPNLPALYVHPAL 772
+ + RA +SI + AT + +++D A L
Sbjct 700 GVIRPQLRRAYLEEAVQRALVSIGK---GATGFYRSGIDRVKVDVGDA----VAMADAGL 752
Query 773 IEQALFNVLENAAKFSPDAVPIQVKISAVDEQFQIDIIDLGIGIPEQEREQIFDMFYTMQ 832
+E+ L N+++NA +++PD V ++V V E+ I++ID G G+P EQ+F F +
Sbjct 753 LERVLANLIDNALRYAPDCV-VRVNAGRVRERVLINVIDEGPGVPRGTEEQLFAPF--QR 809
Query 833 RGDR-GKTGTGLGLAIVKAIIGAHMGSIEAMAGPYG 867
GD TG GLG+++ + + A G+I A P G
Sbjct 810 PGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGG 845
>Q2FWH7 Sensor histidine kinase KdpD [Staphylococcus aureus (strain
NCTC 8325 / PS 47)]
Length=885
Score = 353 bits (907), Expect = 2e-111
Identities = 241/864 (28%), Positives = 437/864 (51%), Gaps = 36/864 (4%)
Query 20 EQSGRLTIFLGAAPGVGKTYAMLTRAHELMQQGKQVVVGVVETHGRADTARLIAGLNVIP 79
++ G LTI++G +PGVGKT+ ML+ A EL Q + +G +E H R +T L L I
Sbjct 11 KKRGSLTIYIGYSPGVGKTFEMLSNAIELFQSNVDIKIGYIEPHQRDETNALAEQLPKIT 70
Query 80 RRVVEYQDRKLEEMDLDQILHIKPEIVLVDELAHRNVPGSRHEYRWQDVNEILDAGINVY 139
++ + +D+D+I+ P IVL+DELAH N+ RHE R+ D+ EIL+ GI+V+
Sbjct 71 TNFTKHGSHHFQYLDVDRIIEESPTIVLIDELAHTNISRDRHEKRYMDIEEILNHGIDVH 130
Query 140 STLNIQHLESLNDVVYQITGIRVTETVPDALLKRLKDIRLVDLPVPELLERMKHGKIYLD 199
+TLNIQH+ESL+ + +TG+ V E VPD + + +VD+ +L++R+K GK+Y
Sbjct 131 TTLNIQHIESLSSQIELMTGVHVKERVPDYFIMSADVLEVVDISPEQLIKRLKAGKVYKK 190
Query 200 DMAPHALQGFFKPAHLTALRDLAIQTVAGQVEIDYREKSVAQGRIVPIQNHVMLAIDGSV 259
D A FF AHL+ LR L ++TVA ++ ++ V ++ H+ +AI GS+
Sbjct 191 DRLDVAFSNFFTYAHLSELRTLTLRTVA---DLMSDKEKVRHNHKTSLKPHIAVAISGSI 247
Query 260 FAEDLVRRAHRIAERRNATWSVISI---QKSKTSSAQSLAVSKAFNLARKLGADTYLLYS 316
+ E +++ A IA++ +A ++ I I +K++ V + LA+ LGA ++YS
Sbjct 248 YNEAVIKEAFHIAQKEHAKFTAIYIDVFEKNRQYKDSQKQVHQHLMLAKSLGAKVKVVYS 307
Query 317 HQIAPTILQAAYDYGASNILLGKSPKKTLLERIRSEHIADQLLDKQHPFEITFVQPLKAT 376
+A + + + + +++G+ + + + + D L+ +H ++I V P+K
Sbjct 308 QTVALGLDEWCKNQDVTKLIIGQHIRNKWRDFFNTP-LIDHLMSFEHSYKIEIV-PIKQI 365
Query 377 SYSAQA-AVPDQTWLQQYTHFQARELIESVLIVLAGFIIAVISDHFIGYTELALIFVVTV 435
+ P + +++ + ++ ++ V+ G I + H T + +IF++ +
Sbjct 366 PVELKMNKSPYRPKGKRFAIDMLKMILIQIICVMMGLWIYQLDKH-ESSTIILMIFLIGI 424
Query 436 LVVAMRAR-MLMTLLSVFVCFLLYNYFFIEPRFTFRISAERGVITIVIFILSALLVGRLA 494
+++++ R ++ L+ + ++NYFF EPR+TF + IT ++ IL+++L L
Sbjct 425 ILLSIWTRSFIIGFLAAIINVFVFNYFFTEPRYTFEVYRFDYPITFIVSILTSILTSALL 484
Query 495 NQLRAQVLSLRVANSVSLQLQELERKLSTCVDIAQVLSVSKQHLESALKATAWLRVS-EL 553
Q++ Q + QL + I Q +V + + + L+ S +
Sbjct 485 KQIKFQY------SITKKQLYRTDLLFQFNDSIKQTYTVENLLINAGYQINQLLQQSITI 538
Query 554 EAGDRSQL-------NHKDHI------AADWTQKNGQPCGRFTNTLTQSEWWFNPLNLAG 600
++S++ NH D+ A W KN + G T+T W P+ +
Sbjct 539 YVINQSKVIKTIPLQNHIDNTTQQHEQALSWVIKNERQAGATTDTFPGINKWLIPIGTSP 598
Query 601 EHGVIALRFHPDLDVISFEQQRLAELMIEDIAQTLARVLLSFQLENSRVVAETEKLRSAL 660
G++A+ + VI+ + E M+ +++ + V L Q S + AE + S
Sbjct 599 IKGILAIDYQSS-QVINPYDASILESMLNELSLAVENVTLLKQTRESMLQAERQLTHSNF 657
Query 661 LSSVSHDLRSPLAAMIGSADTLKYYSVQLSDTDRDSLLDTIHIEGERLDRYIQNLLDMTR 720
L S+SHD+R+PL ++G+ D L +S +S +++ LL E + L + N+L +T+
Sbjct 658 LRSISHDIRTPLTTIMGNLDILVSHSKDMSIIEKEQLLVHSFQESQYLYLLVTNILSLTK 717
Query 721 LGHQGLTLSRAWISIDELIGSATQRLKRYQPNIQIDTHIAPNLPALYVHPALIEQALFNV 780
L + + + EL+ L+R +I + NL +++ LI QALFN+
Sbjct 718 LQSSNVQIKLQPYLVSELVEEIDMILERRHLKKRITVSSSVNLQFIHIDSKLILQALFNL 777
Query 781 LENAAKFSPDAVPIQVKIS-AVDEQFQIDIIDLGIGIPEQEREQIFDMFYTMQR---GDR 836
+ENA K + I + I A EQ + +ID G GI +E+++IF+ FYT D
Sbjct 778 IENAVKHTSTDTKINLSIRYASYEQIEFAVIDEGPGISLEEQQKIFEPFYTGSNKYFKDN 837
Query 837 GKTGTGLGLAIVKAIIGAHMGSIE 860
K GLGL +V+ I+ H +++
Sbjct 838 QKESMGLGLYLVQTILHKHQSNLQ 861
>P73870 Putative sensor protein KdpD [Synechocystis sp. (strain
PCC 6803 / Kazusa)]
Length=370
Score = 234 bits (597), Expect = 1e-72
Identities = 134/320 (42%), Positives = 189/320 (59%), Gaps = 4/320 (1%)
Query 23 GRLTIFLGAAPGVGKTYAMLTRAHELMQQGKQVVVGVVETHGRADTARLIAGLNVIPRRV 82
G+ IF+G APGVGKTY ML +L Q+G VV+G++ETHGR +TA+ GL +P R
Sbjct 21 GKHKIFIGMAPGVGKTYRMLEEGQQLKQEGFDVVIGLLETHGREETAQKAIGLEQVPLRT 80
Query 83 VEYQDRKLEEMDLDQILHIKPEIVLVDELAHRNVPGSRHEYRWQDVNEILDAGINVYSTL 142
+ +Q R L EMD IL P++ LVDELAH N+PG+ E R+QDV IL AGI+VYST+
Sbjct 81 MIWQGRSLLEMDTGAILARSPQLALVDELAHTNIPGAEREKRYQDVELILAAGIDVYSTI 140
Query 143 NIQHLESLNDVVYQITGIRVTETVPDALLKRLKDIRLVDLPVPELLERMKHGKIYLDDMA 202
NIQHLESLND+VY+I+G+ V E VPD LL ++ +VD+ L ER++ GKIY D
Sbjct 141 NIQHLESLNDLVYKISGVVVRERVPDRLLDEADEVVVVDVTPETLQERLQEGKIYAQDKI 200
Query 203 PHALQGFFKPAHLTALRDLAIQTVAGQVEIDYREKSVAQGRIVPIQNHVMLAIDGSVFAE 262
ALQ FFK +L ALR+LA++ VA +E + R Q + +++ I +
Sbjct 201 NQALQNFFKRQNLVALRELALREVANNIEENSRHDQ--QTNHCAVHERILVCISTYPNSI 258
Query 263 DLVRRAHRIAERRNATWSVISIQKSK--TSSAQSLAVSKAFNLARKLGADTYLLYSHQIA 320
L+RR RIA + N V+ + + S ++L V +L ++ + S +
Sbjct 259 QLLRRGGRIASQMNGRLFVLFVAPTNQFLSKVEALHVETCQHLTQEFEGEFIRQESDNVV 318
Query 321 PTILQAAYDYGASNILLGKS 340
I Q A Y + I+LG+S
Sbjct 319 GAIAQVATTYRITQIVLGES 338
>O34971 Sensor protein KdpD [Rathayibacter rathayi]
Length=854
Score = 244 bits (622), Expect = 1e-71
Identities = 238/878 (27%), Positives = 387/878 (44%), Gaps = 77/878 (9%)
Query 27 IFLGAAPGVGKTYAMLTRAHELMQQGKQVVVGVVETHGRADTARLIAGLNVIPRRVVEYQ 86
+ LGA GVGKT+ ML A L +G VVV VVETHGRA TA + GL V+PR VE++
Sbjct 7 VLLGAPRGVGKTFTMLEEAKPLRDEGVDVVVAVVETHGRAGTAAALVGLEVVPRLTVEHR 66
Query 87 DRKLEEMDL-DQILHIKPEIVLVDELAHRNVPGSRHEYRWQDVNEILDAGINVYSTLNIQ 145
L EMD+ I+ P++ LVDELAH N R E RWQDV ILDAGI+V ST+NIQ
Sbjct 67 GVVLTEMDVAGVIVRRAPQLALVDELAHTNASRQRTEKRWQDVEAILDAGIDVMSTVNIQ 126
Query 146 HLESLNDVVYQITGIRVTETVPDALLKRLKDIRLVDLPVPELLERMKHGKIYLDDMAPHA 205
H+ESL DVV++ITG ET+PD +L+ ++I ++D+ P + G +Y + A
Sbjct 127 HIESLTDVVHKITGAPQRETIPDEVLRAAREIEVIDV-TPVAAGALASGLVYPAERIDAA 185
Query 206 LQGFFKPAHLTALRDLAIQTVAGQVEIDYREKSVAQG--RIVPIQNHVMLAIDGSVFAED 263
L +F+ +LT LR+LA+ +A +V+ + QG + V++A+ G +
Sbjct 186 LSNYFRLGNLTGLRELALLWLADEVDSALKNYRAEQGIDSTWETRERVVVALTGGPEGDS 245
Query 264 LVRRAHRIAERRNATWSVISIQKSKTSSAQSLAVSKAFNLARKLGADTYLLYSHQIAPTI 323
A + + + + + + +L LG + + IA +
Sbjct 246 HPPGATHCRPCGRGELLAVHVTGQDGFAPPTRGLWRQRSLVESLGGSYHQVIGDDIA--L 303
Query 324 LQAAYDYGASNILLGKSPKKTLLERIRSEHIADQLLDKQHPFEITFVQPLKATSYSAQAA 383
++ A A+ +++G S + L R D + + ++ V A
Sbjct 304 VEFARAANATQLVIGVSRRGRLARRCPVRGSVDGHRESGN-IDVHIVNHAAAGGRFTLPR 362
Query 384 VPDQTWLQQYTHFQARELIESVLIVLAGFIIAVISDHF---IGYTELALIFVVTVLVVAM 440
+ + R L L ++ G +I + F T L + V V++VA+
Sbjct 363 MAGGALTVK------RRLSGLALTLILGPLITAVLVTFRSPDSITSDVLTYQVLVVLVAL 416
Query 441 RARMLMTLLSVFVCFLLYNYFFIEPRFTFRISAERGVITIVIFILSALLVGRLANQLRAQ 500
+ LL+ + + +YF +EP FT + + + ++I A++V + +Q +
Sbjct 417 VGGIWPALLAAVLSGITLDYFLVEPLFTVTVDKPLHLFALALYITIAMMVSYVVDQAARR 476
Query 501 VLSLRVANSVSLQLQELERKLSTCV--DIAQVLSVSKQHLESALKATAWL-RVSELE--- 554
RVA + + + L + + D A VS+ W+ RV +
Sbjct 477 T---RVARRSAAESELLATIAGSVLRGDGALQSLVSRTRKVWVEGCDCWMPRVRPITPTR 533
Query 555 ---AGDRSQLNHKDHIAADWTQKNGQPCGRFTNTLTQSEWWFNPLNLAGEHGVIALRFHP 611
A ++ +H I AD G+P L GE + L
Sbjct 534 PPGADGQTAADHA-VICAD-----GEPASDDRVVLVP----------VGERATLELH-GA 576
Query 612 DLDVISFEQQRLAELMIEDIAQTLARVLLSFQLENSRVVAETEKLRSALLSSVSHDLRSP 671
DLD ++RL ++ I L LS +AET+++R+ALLS+VSHDLR P
Sbjct 577 DLDA---SERRLLAVIAAQIDAALEHEALSVTAREVGPLAETDRVRTALLSAVSHDLRRP 633
Query 672 LAAMIGSADTLKYYSVQLSD--------TDRDSLLDTIHIEGERLDRYIQNLLDMTRLGH 723
G + ++ D RD H L + +LLD++R+
Sbjct 634 FD---GGNQKGGWLALHRDDPVCRRPGGAARDRRRKPAH-----LSVLVTDLLDVSRVQA 685
Query 724 QGLTLSRAWISIDELIGSATQRLKRYQPNIQIDTHIAPNLPALYVHPALIEQALFNVLEN 783
L ++ + +++++ A L + +D A + + P L+++ L N+L N
Sbjct 686 GVLGVTVRQVDVEDVLPRALDELGVGPDQVVLDLDAA--VGPVLADPGLLQRVLVNLLAN 743
Query 784 AAKFSPDAVPIQVKISAVDEQF----QIDIIDLGIGIPEQEREQIFDMFYTMQRGDRGKT 839
A +FSP+ + +D+ F QI + D G GI R+ +F F + D T
Sbjct 744 ALRFSPEGA-----VPTIDQSFGDTVQIRVTDHGPGIAADRRDDVFVPFQRLGDTD-NST 797
Query 840 GTGLGLAIVKAIIGAHMGSIEAMAGPYGQGTQIRIRLP 877
G GLGLA+ K G ++ P G G + + LP
Sbjct 798 GLGLGLALSKGFTVGMGGELDTEDTP-GGGLTMVVTLP 834
>P23545 Alkaline phosphatase synthesis sensor protein PhoR [Bacillus
subtilis (strain 168)]
Length=579
Score = 114 bits (285), Expect = 2e-29
Identities = 71/234 (30%), Positives = 127/234 (54%), Gaps = 11/234 (5%)
Query 654 EKLRSALLSSVSHDLRSPLAAMIGSADTLKYYSVQLSDTDRDSLLDTIHI---EGERLDR 710
E++R +++VSH+L++P+ ++ G +TL +++ D+++L + + I E ERL
Sbjct 348 EQMRKDFVANVSHELKTPITSIKGFTETLLDGAME----DKEALSEFLSIILKESERLQS 403
Query 711 YIQNLLDMTRLGHQGLTLSRAWISIDELIGSATQRLKRYQPNIQIDTHIAPNLPALYVH- 769
+Q+LLD++++ Q TLS +++G LK I H+ YV
Sbjct 404 LVQDLLDLSKIEQQNFTLSIETFEPAKMLGEIETLLKHKADEKGISLHLNVPKDPQYVSG 463
Query 770 -PALIEQALFNVLENAAKFSPDAVPIQVKISAVDEQFQIDIIDLGIGIPEQEREQIFDMF 828
P ++Q N++ NA ++P+ + + + ++ QI++ D GIGI ++E +IF+ F
Sbjct 464 DPYRLKQVFLNLVNNALTYTPEGGSVAINVKPREKDIQIEVADSGIGIQKEEIPRIFERF 523
Query 829 YTMQRG-DRGKTGTGLGLAIVKAIIGAHMGSIEAMAGPYGQGTQIRIRLPQHQE 881
Y + + R GTGLGLAIVK +I AH G I+ + G+GT + L + E
Sbjct 524 YRVDKDRSRNSGGTGLGLAIVKHLIEAHEGKID-VTSELGRGTVFTVTLKRAAE 576
>P35164 Sensor histidine kinase ResE [Bacillus subtilis (strain
168)]
Length=589
Score = 111 bits (278), Expect = 2e-28
Identities = 68/211 (32%), Positives = 117/211 (55%), Gaps = 8/211 (4%)
Query 654 EKLRSALLSSVSHDLRSPLAAMIGSADTLKYYSVQLSDTDRDSLLDTIHIEGERLDRYIQ 713
+KLR +++VSH+LR+P++ + G ++ + + S+ DR + I+ E R+ R +
Sbjct 362 DKLREDFIANVSHELRTPISMLQGYSEAI-VDDIASSEEDRKEIAQIIYDESLRMGRLVN 420
Query 714 NLLDMTRL--GHQGLTLSRAWISIDELIGSATQRLKRY--QPNIQIDTHIAPNLPALYVH 769
+LLD+ R+ GH GL + I+++E + ++ + NI +D I+
Sbjct 421 DLLDLARMESGHTGLHYEK--INVNEFLEKIIRKFSGVAKEKNIALDHDISLTEEEFMFD 478
Query 770 PALIEQALFNVLENAAKFSPDAVPIQVKISAVDEQFQIDIIDLGIGIPEQEREQIFDMFY 829
+EQ N+++NA + + + + + +V + +IDI D G GIPE++ IF+ FY
Sbjct 479 EDKMEQVFTNLIDNALRHTSAGGSVSISVHSVKDGLKIDIKDSGSGIPEEDLPFIFERFY 538
Query 830 TMQRG-DRGKTGTGLGLAIVKAIIGAHMGSI 859
+ RG+ GTGLGLAIVK I+ AH GSI
Sbjct 539 KADKARTRGRAGTGLGLAIVKNIVEAHNGSI 569
>Q45614 Sensor histidine kinase WalK [Bacillus subtilis (strain
168)]
Length=611
Score = 104 bits (260), Expect = 3e-26
Identities = 92/284 (32%), Positives = 140/284 (49%), Gaps = 26/284 (9%)
Query 619 EQQRLAELMIE-DIAQTLARVLLS-FQLENSRV---------VAETEKL---RSALLSSV 664
EQQ L IE D T+ RV S Q E+ ++ V E EK+ R +++V
Sbjct 325 EQQDSMLLEIERDDELTVLRVNFSVIQREHGKIDGLIAVIYDVTEQEKMDQERREFVANV 384
Query 665 SHDLRSPLAAMIGSADTLKYYSVQLSDTDRDSLLDTIHIEGERLDRYIQNLLDMTRLGHQ 724
SH+LR+PL M + L + + D L+ T + E ER+ R + +LL +++ +
Sbjct 385 SHELRTPLTTMRSYLEALAEGAWENKDIAPRFLMVTQN-ETERMIRLVNDLLQLSKFDSK 443
Query 725 GLTLSRAWISIDELIGSATQRLKRYQPNIQIDTHIAPNLPA--LYVH--PALIEQALFNV 780
+R WI I + + R++ + NLP LYV I Q L N+
Sbjct 444 DYQFNREWIQIVRFMSLI---IDRFEMTKEQHVEFIRNLPDRDLYVEIDQDKITQVLDNI 500
Query 781 LENAAKFSPDA--VPIQVKISAVDEQFQIDIIDLGIGIPEQEREQIFDMFYTMQRGDRGK 838
+ NA K+SP+ V + ++ +E I + D GIGIP+++ E++FD FY + + K
Sbjct 501 ISNALKYSPEGGHVTFSIDVNEEEELLYISVKDEGIGIPKKDVEKVFDRFYRVDKARTRK 560
Query 839 T-GTGLGLAIVKAIIGAHMGSIEAMAGPYGQGTQIRIRLPQHQE 881
GTGLGLAI K ++ AH G I A G+GT I LP +E
Sbjct 561 LGGTGLGLAIAKEMVQAHGGDIWA-DSIEGKGTTITFTLPYKEE 603
Score = 21.2 bits (43), Expect = 2.8
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 10/59 (17%)
Query 638 VLLSFQLENSRVVAETEKLRSALLSSVSHDLRSPLAAMIGSADTLKYYSVQLSDTDRDS 696
++++ Q+ V + EK +L+SS L + D L YY Q +D DS
Sbjct 22 IIIAMQIIGVYFVNQVEK---SLISSYEQSLNQRI-------DNLSYYIEQEYKSDNDS 70
>Q06904 Adaptive-response sensory kinase SasA [Synechococcus elongatus
(strain ATCC 33912 / PCC 7942 / FACHB-805)]
Length=387
Score = 100 bits (250), Expect = 9e-26
Identities = 71/249 (29%), Positives = 124/249 (50%), Gaps = 12/249 (5%)
Query 642 FQLENSRV-VAETEKLRSALLSSVSHDLRSPLAAMIGSADTLKYYSVQLSDTDRD----- 695
FQL+ ++E K +++ V+HDLR+PL A + + DT++ S S
Sbjct 136 FQLQQQYADLSERTKFLEQVIALVAHDLRNPLTAALLAVDTIQIRSQSFSVATAKEMQGL 195
Query 696 -SLLDTIHIEGERLDRYIQNLLDMTRLGHQGLTLSRAWISIDELIGSATQRL-KRYQPNI 753
SL D + ++R I +L+ TR + L ++ + + L+ ++L +R++
Sbjct 196 CSLFDQARSQLREIERMIAEILEATRHSGESLRINPREVVFEPLLQQVLEQLHERWRSKQ 255
Query 754 Q-IDTHIAPNLPALYVHPALIEQALFNVLENAAKFSPDAVPIQV-KISAVDEQFQIDIID 811
Q + T + +LP LY P + Q L N+L+NA K++P I + + ++ QI I D
Sbjct 256 QQLITDVPGDLPTLYADPDRLRQVLVNLLDNAIKYTPPGGTITIAALHRTSQKVQISISD 315
Query 812 LGIGIPEQEREQIFDMFYTMQRGDRGKTGTGLGLAIVKAIIGAHMGSIEAMAGPYGQGTQ 871
G GIP + IF + R D + G G+GL++ + I+ AH G I +A GQG+
Sbjct 316 TGSGIPRDQLSVIFKNLVRLSR-DSSQEGYGIGLSVCQRIVQAHFGRI-WVASELGQGST 373
Query 872 IRIRLPQHQ 880
+P ++
Sbjct 374 FHFTMPVYR 382
>P20169 Drug sensory protein A [Synechocystis sp. (strain PCC
6803 / Kazusa)]
Length=663
Score = 99.4 bits (246), Expect = 2e-24
Identities = 72/244 (30%), Positives = 123/244 (50%), Gaps = 20/244 (8%)
Query 652 ETEKLRSALLSSVSHDLRSPLAAMIGSADTLKYYSVQLSDTDRDSLLDTIHIEGERLDRY 711
E + +S +S+VSH+LR+PL + +TL + LS+ +R L+T + E +RL R
Sbjct 418 ELNEAKSQFISNVSHELRTPLFNIKSFIETLSEFGEDLSEVERKEFLETANHETDRLSRL 477
Query 712 IQNLLDMTRLGHQGLTLSRAWISIDELIGSATQRLKRYQPN-----IQIDTHIAPNLPAL 766
+ ++LD+++L + A + + +LI Q L+ YQ N +Q++ + P+LP
Sbjct 478 VNDVLDLSKLESSKIYQLDA-VDLYQLI---EQSLRSYQLNAKDKQLQLEKILDPDLPFA 533
Query 767 YVHPALIEQALFNVLENAAKFSPDAVPIQVKISAVDEQ----------FQIDIIDLGIGI 816
+ L+ Q + N++ N+ KF+ I V+ + +++I D GIGI
Sbjct 534 LGNYDLLLQVMTNLIGNSFKFTKAGGKIIVRAYPLHRSNLRAEDGPGLVRVEISDTGIGI 593
Query 817 PEQEREQIFDMFYTMQRGDRGKTGTGLGLAIVKAIIGAHMGSIEAMAGPYGQGTQIRIRL 876
+++ IF+ FY ++ GTGLGL+IVK II H I + G GT L
Sbjct 594 DPEDQAAIFERFYRVENRVHTLEGTGLGLSIVKNIIAKHQSQIH-LVSEVGVGTTFWFDL 652
Query 877 PQHQ 880
+Q
Sbjct 653 AVYQ 656
Score = 23.1 bits (48), Expect = 0.73
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 0/44 (0%)
Query 613 LDVISFEQQRLAELMIEDIAQTLARVLLSFQLENSRVVAETEKL 656
LD+ E ++ +L D+ Q + + L S+QL + EK+
Sbjct 482 LDLSKLESSKIYQLDAVDLYQLIEQSLRSYQLNAKDKQLQLEKI 525
>A0QR01 Sensor-like histidine kinase SenX3 [Mycolicibacterium
smegmatis (strain ATCC 700084 / mc(2)155)]
Length=384
Score = 96.3 bits (238), Expect = 3e-24
Identities = 73/257 (28%), Positives = 126/257 (49%), Gaps = 9/257 (4%)
Query 627 MIEDIAQTLARVLLSFQLENSRVVAETEKLRSALLSSVSHDLRSPLAAMIGSADTLKYYS 686
++ D + A V + Q E++R+ E R +++VSH+L++P+ AM A+ L S
Sbjct 121 LLTDDDRRFAVVYIDDQSEHARM----EATRRDFVANVSHELKTPVGAMSVLAEAL-LAS 175
Query 687 VQLSDTDRDSLLDTIHIEGERLDRYIQNLLDMTRLGHQGLTLSRAWISIDELIGSATQRL 746
DT R + + E RL I L++++RL + +D ++ A R
Sbjct 176 ADDPDTVR-RFAEKMVAESHRLADMIGELIELSRLQGAERLPDLDAVDVDSIVSEAVSRH 234
Query 747 KRYQPNIQID-THIAPNLPALYVHPALIEQALFNVLENAAKFSPDAVPIQVKISAVDEQF 805
K N QI T AP + L+ A+ N++ NA +SP+ + +
Sbjct 235 KVAADNSQISITTDAPTGYRVLGDEGLLVTAIANLVSNAIAYSPNGTDVSISRRKRGGNI 294
Query 806 QIDIIDLGIGIPEQEREQIFDMFYTMQRG-DRGKTGTGLGLAIVKAIIGAHMGSIEAMAG 864
+I + D GIGI + ++E++F+ F+ + + R GTGLGLAIVK + H GSI +
Sbjct 295 EIAVTDRGIGIAKDDQERVFERFFRVDKARSRATGGTGLGLAIVKHVAANHNGSIRLWSQ 354
Query 865 PYGQGTQIRIRLPQHQE 881
P G G+ + +P++ +
Sbjct 355 P-GTGSTFTLSIPEYPD 370
Score = 20.4 bits (41), Expect = 4.6
Identities = 7/14 (50%), Positives = 11/14 (79%), Gaps = 0/14 (0%)
Query 260 FAEDLVRRAHRIAE 273
FAE +V +HR+A+
Sbjct 185 FAEKMVAESHRLAD 198
Lambda K H a alpha
0.323 0.136 0.389 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 6640787
Database: b9ff872bc38073d04683259d355300da.SwissProt.fasta
Posted date: May 30, 2024 12:16 PM
Number of letters in database: 8,836
Number of sequences in database: 13
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
