BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 2789f4bf735e3183c334286d12a4471d.SwissProt.fasta
1 sequences; 138 total letters
Query= ACIAD2992
Length=142
Score E
Sequences producing significant alignments: (Bits) Value
P46235 Probable lactoylglutathione lyase [Vibrio parahaemolyticus... 32.0 6e-07
>P46235 Probable lactoylglutathione lyase [Vibrio parahaemolyticus
serotype O3:K6 (strain RIMD 2210633)]
Length=138
Score = 32.0 bits (71), Expect = 6e-07
Identities = 22/71 (31%), Positives = 37/71 (52%), Gaps = 11/71 (15%)
Query 17 MENHQSIIPVLRIFDVDKAKNFYLDFLGFKLDWTHQFEENFPLYMQLSKDQYCLHLTEHY 76
M N + + +LR+ D+DK+ FY + +G +L T++ +E +Y L Y
Sbjct 1 MSNGRILHTMLRVGDLDKSIKFYTEVMGMQLLRTNENKEY----------EYTLAFV-GY 49
Query 77 GDCSPGALVRL 87
GD S GA++ L
Sbjct 50 GDESQGAVIEL 60
Lambda K H a alpha
0.327 0.141 0.449 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 15621
Database: 2789f4bf735e3183c334286d12a4471d.SwissProt.fasta
Posted date: May 9, 2024 1:05 PM
Number of letters in database: 138
Number of sequences in database: 1
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
