BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 42cb58c9b85b37f47318bfa95ca2e0b6.SwissProt.fasta
15 sequences; 6,316 total letters
Query= ACIAD3034
Length=460
Score E
Sequences producing significant alignments: (Bits) Value
Q6F880 tRNA(Ile)-lysidine synthase [Acinetobacter baylyi (strain ... 934 0.0
A3N2I9 tRNA(Ile)-lysidine synthase [Actinobacillus pleuropneumoni... 207 3e-65
B0BRD5 tRNA(Ile)-lysidine synthase [Actinobacillus pleuropneumoni... 204 3e-64
B3GYM3 tRNA(Ile)-lysidine synthase [Actinobacillus pleuropneumoni... 204 3e-64
Q0I3D1 tRNA(Ile)-lysidine synthase [Histophilus somni (strain 129... 192 2e-59
B0UUD3 tRNA(Ile)-lysidine synthase [Histophilus somni (strain 2336)] 190 9e-59
Q5WYB4 tRNA(Ile)-lysidine synthase [Legionella pneumophila (strai... 187 1e-57
Q5X6W4 tRNA(Ile)-lysidine synthase [Legionella pneumophila (strai... 187 1e-57
Q5ZXE5 tRNA(Ile)-lysidine synthase [Legionella pneumophila subsp.... 187 1e-57
Q7VPN7 tRNA(Ile)-lysidine synthase [Haemophilus ducreyi (strain 3... 184 1e-56
Q7UDQ6 tRNA(Ile)-lysidine synthase [Shigella flexneri] 182 8e-56
P52097 tRNA(Ile)-lysidine synthase [Escherichia coli (strain K12)] 180 4e-55
P37563 tRNA(Ile)-lysidine synthase [Bacillus subtilis (strain 168)] 91.3 5e-23
Q9XBG6 tRNA(Ile)-lysidine synthase [Bradyrhizobium diazoefficiens... 72.0 6e-17
Q7MR31 tRNA(Ile)-lysidine synthase [Wolinella succinogenes (strai... 59.3 6e-13
>Q6F880 tRNA(Ile)-lysidine synthase [Acinetobacter baylyi (strain
ATCC 33305 / BD413 / ADP1)]
Length=459
Score = 934 bits (2413), Expect = 0.0
Identities = 459/459 (100%), Positives = 459/459 (100%), Gaps = 0/459 (0%)
Query 1 MRSALPTFDEIWQRKFRHRLLIQAQQFPADTVFLIGCSGGMDSMLLLHLMSELFPHKVRA 60
MRSALPTFDEIWQRKFRHRLLIQAQQFPADTVFLIGCSGGMDSMLLLHLMSELFPHKVRA
Sbjct 1 MRSALPTFDEIWQRKFRHRLLIQAQQFPADTVFLIGCSGGMDSMLLLHLMSELFPHKVRA 60
Query 61 IYIDHQLQSSSRAWGVFVQNFAQQSHIPFTIQPVIVDTGNLENQAREARYAAFESHLKSN 120
IYIDHQLQSSSRAWGVFVQNFAQQSHIPFTIQPVIVDTGNLENQAREARYAAFESHLKSN
Sbjct 61 IYIDHQLQSSSRAWGVFVQNFAQQSHIPFTIQPVIVDTGNLENQAREARYAAFESHLKSN 120
Query 121 EVLVLAHHQQDQTETVLLRLLSGSGVKGLGAMKEIEQKKNICCWRPMLSVSRQQIEHWVE 180
EVLVLAHHQQDQTETVLLRLLSGSGVKGLGAMKEIEQKKNICCWRPMLSVSRQQIEHWVE
Sbjct 121 EVLVLAHHQQDQTETVLLRLLSGSGVKGLGAMKEIEQKKNICCWRPMLSVSRQQIEHWVE 180
Query 181 HLKIPYIQDLTNFDTTYDRAWCRETVWPVLQKRFPKMQEAISRTSILMQDADEILHEVLQ 240
HLKIPYIQDLTNFDTTYDRAWCRETVWPVLQKRFPKMQEAISRTSILMQDADEILHEVLQ
Sbjct 181 HLKIPYIQDLTNFDTTYDRAWCRETVWPVLQKRFPKMQEAISRTSILMQDADEILHEVLQ 240
Query 241 QDLNQCGDLNHLDLSRLQQLSLARQRQLLSFWMKGKAIYRPAFEMVERVQQEVICAKADA 300
QDLNQCGDLNHLDLSRLQQLSLARQRQLLSFWMKGKAIYRPAFEMVERVQQEVICAKADA
Sbjct 241 QDLNQCGDLNHLDLSRLQQLSLARQRQLLSFWMKGKAIYRPAFEMVERVQQEVICAKADA 300
Query 301 KAALHWNHHYYVRYQNILYRVEKNKYLQKDLVSNVVSTIELQMDASLQLASGVFQIQPMQ 360
KAALHWNHHYYVRYQNILYRVEKNKYLQKDLVSNVVSTIELQMDASLQLASGVFQIQPMQ
Sbjct 301 KAALHWNHHYYVRYQNILYRVEKNKYLQKDLVSNVVSTIELQMDASLQLASGVFQIQPMQ 360
Query 361 MGLSPQLFEQPLQLLPRQGGEKIHLYGRVGHWPLKKAIQEAQILPWLRHTIQILALDNVM 420
MGLSPQLFEQPLQLLPRQGGEKIHLYGRVGHWPLKKAIQEAQILPWLRHTIQILALDNVM
Sbjct 361 MGLSPQLFEQPLQLLPRQGGEKIHLYGRVGHWPLKKAIQEAQILPWLRHTIQILALDNVM 420
Query 421 LGVFTPKGFWLAQSSYCEAGGWQPNLISDVNYLRVEQNS 459
LGVFTPKGFWLAQSSYCEAGGWQPNLISDVNYLRVEQNS
Sbjct 421 LGVFTPKGFWLAQSSYCEAGGWQPNLISDVNYLRVEQNS 459
>A3N2I9 tRNA(Ile)-lysidine synthase [Actinobacillus pleuropneumoniae
serotype 5b (strain L20)]
Length=419
Score = 207 bits (526), Expect = 3e-65
Identities = 138/413 (33%), Positives = 216/413 (52%), Gaps = 34/413 (8%)
Query 13 QRKFRHRLLIQAQQFPADTVFLIGCSGGMDSMLLLHLMSELFPHKVRAIYIDHQLQSSSR 72
Q +FRH FP F++G SGG+DS++LLHL++EL +RA++I H L ++
Sbjct 7 QTQFRH-------YFPTQRNFVLGLSGGIDSIVLLHLLAEL-QLNLRAVHIHHGLSPNAD 58
Query 73 AWGVFVQNFAQQSHIPFTIQPVIVDTGN-LENQAREARYAAFESHLKSNEVLVLAHHQQD 131
W F + ++ IPF +Q V VD +E AR ARY A ++ NEVLV AHH D
Sbjct 59 NWAAFCEQVCKRLKIPFILQKVTVDRSEGIEAGARAARYQAIGEIIQPNEVLVTAHHLDD 118
Query 132 QTETVLLRLLSGSGVKGLGAMKEIEQKKNICCWRPMLSVSRQQIEHWVEHLKIPYIQDLT 191
QTET LL L GSG+KGL AM+ + +N +RP+L+VS+ QIE + + +I+D +
Sbjct 119 QTETFLLALKRGSGIKGLSAMQAVGFWQNFTIFRPLLNVSKAQIEQYALQQQFTWIEDES 178
Query 192 NFDTTYDRAWCRETVWPVLQKRFPKMQEAISRTSILMQDADEILHEVLQQDLNQCGDLN- 250
N D+ YDR + R V P++ +R+ + ++R++ + +L E+L Q+L + D +
Sbjct 179 NHDSHYDRNFLRNEVLPIVNQRWQHFSQMVARSAQHCAEQQMLLEELLAQELQRYADFSE 238
Query 251 -HLDLSRLQQLSLARQRQLLSFWMKGKAIYRPAFEMVERVQQEVICAKADAKAALHWNHH 309
L++ Q SLA+Q+QL+ W++ P+ + ++ Q+ I A D L
Sbjct 239 KRLNIEAFPQFSLAKQQQLIRLWLEKCGAQMPSTAQLMQIIQQTIYADVDKNPQLKLADF 298
Query 310 YYVRYQNILYRVEKNKYLQKDLVSNVVSTIELQMDASLQLASGVFQIQPM---------- 359
+ RYQ+ L YL +L+ L SL L G+ ++Q +
Sbjct 299 WLRRYQHHL-------YLTGELLEPDDFCQPLFAQQSLTLPDGIGELQHLGDSIIYQKSG 351
Query 360 ---QMGLSPQLFEQPLQL-LPRQGGEKIHLYGRVGHWPLKKAIQEAQILPWLR 408
++ L L PLQ+ L QG K+ YG+ +KK Q+AQ+ WLR
Sbjct 352 KIDRLLLPKALVNAPLQVKLTHQG--KVKQYGKPMREEMKKRYQQAQVPVWLR 402
Score = 19.2 bits (38), Expect = 3.8
Identities = 5/21 (24%), Positives = 11/21 (52%), Gaps = 0/21 (0%)
Query 10 EIWQRKFRHRLLIQAQQFPAD 30
+ W R+++H L + + D
Sbjct 297 DFWLRRYQHHLYLTGELLEPD 317
>B0BRD5 tRNA(Ile)-lysidine synthase [Actinobacillus pleuropneumoniae
serotype 3 (strain JL03)]
Length=419
Score = 204 bits (519), Expect = 3e-64
Identities = 137/413 (33%), Positives = 215/413 (52%), Gaps = 34/413 (8%)
Query 13 QRKFRHRLLIQAQQFPADTVFLIGCSGGMDSMLLLHLMSELFPHKVRAIYIDHQLQSSSR 72
Q +FRH FP F++G SGG+DS++LLHL++EL +RA++I H L ++
Sbjct 7 QTQFRH-------YFPTQRNFVLGLSGGIDSIVLLHLLAEL-QLNLRAVHIHHGLSPNAD 58
Query 73 AWGVFVQNFAQQSHIPFTIQPVIVDTGN-LENQAREARYAAFESHLKSNEVLVLAHHQQD 131
W F + ++ IPF +Q V VD +E AR ARY A ++ NEVLV AHH D
Sbjct 59 NWAAFCEQVCKRLKIPFILQKVTVDRSEGIEAGARAARYQAIGEIIQPNEVLVTAHHLDD 118
Query 132 QTETVLLRLLSGSGVKGLGAMKEIEQKKNICCWRPMLSVSRQQIEHWVEHLKIPYIQDLT 191
QTET LL L GSG+KGL AM+ + +N +RP+L+VS+ QIE + + +I+D +
Sbjct 119 QTETFLLALKRGSGIKGLSAMQAVGFWQNFTIFRPLLNVSKAQIEQYALQQQFTWIEDES 178
Query 192 NFDTTYDRAWCRETVWPVLQKRFPKMQEAISRTSILMQDADEILHEVLQQDLNQCGDLN- 250
N D+ YDR + R V P++ +R+ + ++R++ + +L E+L Q+L + D +
Sbjct 179 NHDSHYDRNFLRNEVLPIVNQRWQHFSQMVARSAQHCAEQQMLLEELLAQELQRYADFSE 238
Query 251 -HLDLSRLQQLSLARQRQLLSFWMKGKAIYRPAFEMVERVQQEVICAKADAKAALHWNHH 309
L++ Q SLA+Q+QL+ W++ P+ + ++ Q+ I A D L
Sbjct 239 KRLNIEAFPQFSLAKQQQLIRLWLEKCGAQMPSTAQLMQIIQQTIYADVDKNPQLKLADF 298
Query 310 YYVRYQNILYRVEKNKYLQKDLVSNVVSTIELQMDASLQLASGVFQIQPM---------- 359
+ RYQ+ L YL +L+ L SL L G+ ++Q +
Sbjct 299 WLRRYQHHL-------YLTGELLEPDDFCQPLFAQQSLTLPDGIGELQHLGDSIIYQKSG 351
Query 360 ---QMGLSPQLFEQPLQL-LPRQGGEKIHLYGRVGHWPLKKAIQEAQILPWLR 408
++ L L PLQ+ L QG K+ Y + +KK Q+AQ+ WLR
Sbjct 352 KIDRLLLPKVLVNAPLQVKLTHQG--KVKQYAKPMREEMKKRYQQAQVPVWLR 402
Score = 19.2 bits (38), Expect = 3.8
Identities = 5/21 (24%), Positives = 11/21 (52%), Gaps = 0/21 (0%)
Query 10 EIWQRKFRHRLLIQAQQFPAD 30
+ W R+++H L + + D
Sbjct 297 DFWLRRYQHHLYLTGELLEPD 317
>B3GYM3 tRNA(Ile)-lysidine synthase [Actinobacillus pleuropneumoniae
serotype 7 (strain AP76)]
Length=419
Score = 204 bits (519), Expect = 3e-64
Identities = 137/413 (33%), Positives = 215/413 (52%), Gaps = 34/413 (8%)
Query 13 QRKFRHRLLIQAQQFPADTVFLIGCSGGMDSMLLLHLMSELFPHKVRAIYIDHQLQSSSR 72
Q +FRH FP F++G SGG+DS++LLHL++EL +RA++I H L ++
Sbjct 7 QTQFRH-------YFPTQRNFVLGLSGGIDSIVLLHLLAEL-QLNLRAVHIHHGLSPNAD 58
Query 73 AWGVFVQNFAQQSHIPFTIQPVIVDTGN-LENQAREARYAAFESHLKSNEVLVLAHHQQD 131
W F + ++ IPF +Q V VD +E AR ARY A ++ NEVLV AHH D
Sbjct 59 NWAAFCEQVCKRLKIPFILQKVTVDRSEGIEAGARAARYQAIGEIIQPNEVLVTAHHLDD 118
Query 132 QTETVLLRLLSGSGVKGLGAMKEIEQKKNICCWRPMLSVSRQQIEHWVEHLKIPYIQDLT 191
QTET LL L GSG+KGL AM+ + +N +RP+L+VS+ QIE + + +I+D +
Sbjct 119 QTETFLLALKRGSGIKGLSAMQAVGFWQNFTIFRPLLNVSKAQIEQYALQQQFTWIEDES 178
Query 192 NFDTTYDRAWCRETVWPVLQKRFPKMQEAISRTSILMQDADEILHEVLQQDLNQCGDLN- 250
N D+ YDR + R V P++ +R+ + ++R++ + +L E+L Q+L + D +
Sbjct 179 NHDSHYDRNFLRNEVLPIVNQRWQHFSQMVARSAQHCAEQQMLLEELLAQELQRYADFSE 238
Query 251 -HLDLSRLQQLSLARQRQLLSFWMKGKAIYRPAFEMVERVQQEVICAKADAKAALHWNHH 309
L++ Q SLA+Q+QL+ W++ P+ + ++ Q+ I A D L
Sbjct 239 KRLNIEAFPQFSLAKQQQLIRLWLEKCGAQMPSTAQLMQIIQQTIYADVDKNPQLKLADF 298
Query 310 YYVRYQNILYRVEKNKYLQKDLVSNVVSTIELQMDASLQLASGVFQIQPM---------- 359
+ RYQ+ L YL +L+ L SL L G+ ++Q +
Sbjct 299 WLRRYQHHL-------YLTGELLEPDDFCQPLFAQQSLTLPDGIGELQHLGDSIIYQKSG 351
Query 360 ---QMGLSPQLFEQPLQL-LPRQGGEKIHLYGRVGHWPLKKAIQEAQILPWLR 408
++ L L PLQ+ L QG K+ Y + +KK Q+AQ+ WLR
Sbjct 352 KIDRLLLPKVLVNAPLQVKLTHQG--KVKQYAKPMREEMKKRYQQAQVPVWLR 402
Score = 19.2 bits (38), Expect = 3.8
Identities = 5/21 (24%), Positives = 11/21 (52%), Gaps = 0/21 (0%)
Query 10 EIWQRKFRHRLLIQAQQFPAD 30
+ W R+++H L + + D
Sbjct 297 DFWLRRYQHHLYLTGELLEPD 317
>Q0I3D1 tRNA(Ile)-lysidine synthase [Histophilus somni (strain
129Pt)]
Length=427
Score = 192 bits (487), Expect = 2e-59
Identities = 129/408 (32%), Positives = 215/408 (53%), Gaps = 23/408 (6%)
Query 23 QAQQFPADTVFLIGCSGGMDSMLLLHLMSELF---PH-KVRAIYIDHQLQSSSRAWGVFV 78
Q QFP+ T L+G SGG+DS +LL L+++L PH +RAI+I H L ++ W +
Sbjct 10 QLNQFPSHTKLLLGFSGGLDSTVLLSLLAKLRKKQPHLSLRAIHIHHGLSQNADNWAIHC 69
Query 79 QNFAQQSHIPFTIQPVIVDTGN-LENQAREARYAAFESHLKSNEVLVLAHHQQDQTETVL 137
+ QQ I F + V ++ +E AREARY A +HL+ NE+LV AHHQQDQTET L
Sbjct 70 RQICQQLDISFLCEKVTINPRKGIEADAREARYQAIANHLQDNEILVTAHHQQDQTETFL 129
Query 138 LRLLSGSGVKGLGAMKEIEQKKNICCWRPMLSVSRQQIEHWVEHLKIPYIQDLTNFDTTY 197
L L GSG++GLGAM+ N+ +RP+L +RQQ+E + + K+ +I+D +N D Y
Sbjct 130 LALKRGSGLQGLGAMQIQSVVFNLPIFRPLLHCTRQQLEQYAKTEKLSWIEDESNADNRY 189
Query 198 DRAWCRETVWPVLQKRFPKMQEAISRTSILMQDADEILHEVLQQDLNQCGDL--NHLDLS 255
DR + R + P L++R+ + +AI R++ + ++++E+L + N+ D L ++
Sbjct 190 DRNFLRNDILPKLRQRWQHIDKAIQRSAQHCFEQQQLINELLNDEFNKIYDKFDRTLSIA 249
Query 256 RLQQLSLARQRQLLSFWMKGKAIYRPAFEMVERVQQEVICAKADAKAALHWNHHYYVRYQ 315
S+ +Q+ LL W++ I P+ ++ + + +I A+ D + RYQ
Sbjct 250 NFATYSILKQKALLRTWLQHLHILMPSTIQLDNIMRNMIQAQEDRNPTCKLGNQVLRRYQ 309
Query 316 NILYRVEKNKYLQKDLVSNVVSTIELQMDASLQLASGVFQIQPMQMGLSPQLFEQPLQLL 375
LY + +DL S++ +++Q + + L + +I + Q+ Q Q+L
Sbjct 310 KRLYATP----ILQDL-SHI--RLDIQANECINLPDNLGEICLLTKNEHLQVTWQDKQIL 362
Query 376 PRQGGEKIHLYGRVG---------HWPLKKAIQEAQILPWLRHTIQIL 414
EKI + R H +KK Q+ + W R I ++
Sbjct 363 LPLTQEKIEIRFRYSGKVKLPQGFHQEMKKCWQDHNVPIWQRTRIPLI 410
>B0UUD3 tRNA(Ile)-lysidine synthase [Histophilus somni (strain
2336)]
Length=427
Score = 190 bits (482), Expect = 9e-59
Identities = 127/412 (31%), Positives = 215/412 (52%), Gaps = 23/412 (6%)
Query 23 QAQQFPADTVFLIGCSGGMDSMLLLHLMSELF---PH-KVRAIYIDHQLQSSSRAWGVFV 78
Q QFP+ T L+G SGG+DS +LL L+++L PH +RAI+I H L ++ W +
Sbjct 10 QLNQFPSHTKLLLGFSGGLDSTVLLSLLAKLRKKQPHLSLRAIHIHHGLSQNADNWAIHC 69
Query 79 QNFAQQSHIPFTIQPVIVDTGN-LENQAREARYAAFESHLKSNEVLVLAHHQQDQTETVL 137
+ QQ I F + V ++ +E AREARY A +HL+ NE+LV AHHQQDQTET L
Sbjct 70 RQICQQLDISFLCEKVTINPRKGIEADAREARYQAIANHLQDNEILVTAHHQQDQTETFL 129
Query 138 LRLLSGSGVKGLGAMKEIEQKKNICCWRPMLSVSRQQIEHWVEHLKIPYIQDLTNFDTTY 197
L L GSG++GLGAM+ N+ +RP+L ++QQ+E + + K+ +I+D +N D Y
Sbjct 130 LALKRGSGLQGLGAMQIQSVVFNLPIFRPLLHCTKQQLEQYAKTEKLSWIEDESNADNRY 189
Query 198 DRAWCRETVWPVLQKRFPKMQEAISRTSILMQDADEILHEVLQQDLNQCGDL--NHLDLS 255
+R + R + P L++R+ + A+ R++ + ++++E+L + N+ D L ++
Sbjct 190 ERNFLRNDILPKLRQRWQSIDNAVQRSAQHCFEQQQLINELLNDEFNKIYDKFDRTLSIA 249
Query 256 RLQQLSLARQRQLLSFWMKGKAIYRPAFEMVERVQQEVICAKADAKAALHWNHHYYVRYQ 315
S+ +Q+ LL W++ I P+ ++ + + +I A+ D + RYQ
Sbjct 250 NFATYSILKQKALLRTWLQHLHILMPSTIQLDNIMRNMIQAQEDRNPTCRLGNQVLRRYQ 309
Query 316 NILYRVEKNKYLQKDLVSNVVSTIELQMDASLQLASGVFQIQPMQMGLSPQLFEQPLQLL 375
LY + +DL S++ +++Q + + L + +I + Q+ Q Q+L
Sbjct 310 KRLYATP----ILQDL-SHI--RLDIQANECINLPDNLGEICLLTKNEHLQVTWQNKQIL 362
Query 376 PRQGGEKIHLYGRVG---------HWPLKKAIQEAQILPWLRHTIQILALDN 418
EKI + R H +KK Q+ + W R I ++ N
Sbjct 363 LPLTQEKIEIRFRYSGKVKLPQGFHQEMKKCWQDHNVPVWQRTRIPLIFYGN 414
>Q5WYB4 tRNA(Ile)-lysidine synthase [Legionella pneumophila (strain
Lens)]
Length=431
Score = 187 bits (475), Expect = 1e-57
Identities = 126/393 (32%), Positives = 211/393 (54%), Gaps = 19/393 (5%)
Query 34 LIGCSGGMDSMLLLHLMSELFP--HKVRAIYIDHQLQSSSRAWGVFVQNFAQQSHIPFTI 91
++G SGG+DS +LLH+++ P +++ A++I+H + +S W + I F
Sbjct 21 IVGFSGGLDSTVLLHVLASTPPLYNQLLAVHINHGISGNSLNWQRHCEQLCLDLGIAFIA 80
Query 92 QPVIVD-TGNLENQAREARYAAFESHLKSNEVLVLAHHQQDQTETVLLRLLSGSGVKGLG 150
+ + D + N+E AR ARY F S L+ N+ LVL HH DQ ETVLL+L G+GV GL
Sbjct 81 KAIEFDRSANVEEAARNARYDFFSSLLEDNDCLVLGHHLDDQAETVLLQLFRGAGVDGLA 140
Query 151 AMKEIEQKKNICCWRPMLSVSRQQIEHWVEHLKIPYIQDLTNFDTTYDRAWCRETVWPVL 210
AM+E RP L+ R ++EH+ ++ +I+D +N DT Y R + R V P+L
Sbjct 141 AMQECSNLGAGQLARPFLTCPRVELEHYARIHELKWIEDESNQDTKYSRNYLRHRVMPLL 200
Query 211 QKRFPKMQEAISRTSILMQDADEILHEVLQQDLNQCGDL----NHLDLSRLQQLSLARQR 266
+++P + ISR + Q A L EVL + C DL +HL + L+ L R
Sbjct 201 LEKWPGVAGNISRAATHCQQAKANL-EVLA--IKDCPDLLNATDHLLIEPLKGLEFERIT 257
Query 267 QLLSFWMKGKAIYRPAFEMVERVQQEVICAKADAKAALHWNHHYYVRYQNILYRVEKNKY 326
+L FW+K + P+ + +R+ E+I AK DA + WN R+Q LY ++ ++
Sbjct 258 NVLKFWLKKNRVQLPSSKTFQRIIHEIIFAKLDAMPTVSWNQIQVRRFQQHLYLLKADQI 317
Query 327 -LQKDLVSNVVSTIELQMDASLQLASGVFQIQPMQMGLSPQLFEQPLQLLPRQGGEKIHL 385
L K + DA+++L++ ++ + + P+ + +++ R+GGE+I+
Sbjct 318 NLPKAIKWQQFPASLTYPDANIELSA----VKAQKGLMIPK--DAQIEIRFRKGGEEIYW 371
Query 386 YGRVGHWPLKKAIQEAQILPWLRHTIQILALDN 418
+ + H LKK QE QI PWLR + ++ +++
Sbjct 372 HDQTKH--LKKLFQEWQIPPWLRERVPLVYIND 402
>Q5X6W4 tRNA(Ile)-lysidine synthase [Legionella pneumophila (strain
Paris)]
Length=431
Score = 187 bits (474), Expect = 1e-57
Identities = 130/395 (33%), Positives = 208/395 (53%), Gaps = 23/395 (6%)
Query 34 LIGCSGGMDSMLLLHLMSELFP--HKVRAIYIDHQLQSSSRAWGVFVQNFAQQSHIPFTI 91
++G SGG+DS +LLH+++ P +++ A++I+H + +S W + I F
Sbjct 21 IVGFSGGLDSTVLLHVLASTPPLSNQLLAVHINHGISGNSLNWQRHCEQLCLDLGIAFIA 80
Query 92 QPVIVD-TGNLENQAREARYAAFESHLKSNEVLVLAHHQQDQTETVLLRLLSGSGVKGLG 150
+ + D + N+E AR ARY F S L+ N+ LVL HH DQ ETVLL+L G+GV GL
Sbjct 81 KAIEFDRSANVEEAARNARYDFFSSLLEDNDCLVLGHHLDDQAETVLLQLFRGAGVDGLA 140
Query 151 AMKEIEQKKNICCWRPMLSVSRQQIEHWVEHLKIPYIQDLTNFDTTYDRAWCRETVWPVL 210
AM+E RP L+ R ++EH+ ++ +I+D +N DT Y R + R V P+L
Sbjct 141 AMQECSNLGAGQLARPFLTCPRVELEHYARIHELKWIEDESNQDTKYSRNYLRHRVMPLL 200
Query 211 QKRFPKMQEAISRTSILMQDADEILHEVLQQDLNQCGDL----NHLDLSRLQQLSLARQR 266
+++P + ISR + Q A L EVL + C DL +HL + ++ L R
Sbjct 201 LEKWPGVAGNISRAATHCQQAKANL-EVLA--IKDCPDLLNATDHLLIEPIKGLEFERIT 257
Query 267 QLLSFWMKGKAIYRPAFEMVERVQQEVICAKADAKAALHWNHHYYVRYQNILYRVEKNKY 326
+L FW+K I P+ + R+ E+I AK DA + WN R+Q LY
Sbjct 258 NVLKFWLKKNRIQLPSSKTFHRIIHEIIFAKLDAMPTVSWNQIQVRRFQQHLY------L 311
Query 327 LQKDLVSNVVSTIELQMDASLQLASGVFQIQPM--QMGLS-PQLFEQPLQLLPRQGGEKI 383
L+ D ++ + Q ASL ++ + Q GL P+ + +++ R+GGE+I
Sbjct 312 LKADQINLPKAIKWQQFPASLTYPDADIKLSAVKAQKGLMIPK--DAQIEIRFRKGGEEI 369
Query 384 HLYGRVGHWPLKKAIQEAQILPWLRHTIQILALDN 418
+ +G+ H LKK QE QI PW+R + ++ +++
Sbjct 370 YWHGQTKH--LKKLFQEWQIPPWVRDRVPLVYIND 402
>Q5ZXE5 tRNA(Ile)-lysidine synthase [Legionella pneumophila subsp.
pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)]
Length=433
Score = 187 bits (474), Expect = 1e-57
Identities = 130/395 (33%), Positives = 208/395 (53%), Gaps = 23/395 (6%)
Query 34 LIGCSGGMDSMLLLHLMSELFP--HKVRAIYIDHQLQSSSRAWGVFVQNFAQQSHIPFTI 91
++G SGG+DS +LLH+++ P +++ A++I+H + +S W + I F
Sbjct 23 IVGFSGGLDSTVLLHVLASTPPLSNQLLAVHINHGISGNSLNWQRHCEQLCLDLGIAFIA 82
Query 92 QPVIVD-TGNLENQAREARYAAFESHLKSNEVLVLAHHQQDQTETVLLRLLSGSGVKGLG 150
+ + D + N+E AR ARY F S L+ N+ LVL HH DQ ETVLL+L G+GV GL
Sbjct 83 KAIEFDRSANVEEAARNARYDFFSSLLEDNDCLVLGHHLDDQAETVLLQLFRGAGVDGLA 142
Query 151 AMKEIEQKKNICCWRPMLSVSRQQIEHWVEHLKIPYIQDLTNFDTTYDRAWCRETVWPVL 210
AM+E RP L+ R ++EH+ ++ +I+D +N DT Y R + R V P+L
Sbjct 143 AMQECSNLGAGQLARPFLTCPRVELEHYARIHELKWIEDESNQDTKYSRNYLRHRVMPLL 202
Query 211 QKRFPKMQEAISRTSILMQDADEILHEVLQQDLNQCGDL----NHLDLSRLQQLSLARQR 266
+++P + ISR + Q A L EVL + C DL +HL + ++ L R
Sbjct 203 LEKWPGVAGNISRAATHCQQAKANL-EVLA--IKDCPDLLNATDHLLIEPIKGLEFERIT 259
Query 267 QLLSFWMKGKAIYRPAFEMVERVQQEVICAKADAKAALHWNHHYYVRYQNILYRVEKNKY 326
+L FW+K I P+ + R+ E+I AK DA + WN R+Q LY
Sbjct 260 NVLKFWLKKNRIQLPSSKTFHRIIHEIIFAKLDAMPTVSWNQIQVRRFQQHLY------L 313
Query 327 LQKDLVSNVVSTIELQMDASLQLASGVFQIQPM--QMGLS-PQLFEQPLQLLPRQGGEKI 383
L+ D ++ + Q ASL ++ + Q GL P+ + +++ R+GGE+I
Sbjct 314 LKADQINLPKAIKWQQFPASLTYPDADIKLSAVKAQKGLMIPK--DAQIEIRFRKGGEEI 371
Query 384 HLYGRVGHWPLKKAIQEAQILPWLRHTIQILALDN 418
+ +G+ H LKK QE QI PW+R + ++ +++
Sbjct 372 YWHGQTKH--LKKLFQEWQIPPWVRDRVPLVYIND 404
>Q7VPN7 tRNA(Ile)-lysidine synthase [Haemophilus ducreyi (strain
35000HP / ATCC 700724)]
Length=428
Score = 184 bits (467), Expect = 1e-56
Identities = 125/418 (30%), Positives = 219/418 (52%), Gaps = 27/418 (6%)
Query 25 QQFPADTVFLIGCSGGMDSMLLLHLMSELFPHKVRAIYIDHQLQSSSRAWGVFVQNFAQQ 84
Q FP L+ SGG+DS++LL L S +RAIYI H L +++ W F + +Q
Sbjct 12 QHFPQQPNVLLSLSGGIDSVVLLDLFSRTTT-PLRAIYIHHGLSANADNWADFCEALCKQ 70
Query 85 SHIPFTIQPVIVDTGN-LENQAREARYAAFESHLKSNEVLVLAHHQQDQTETVLLRLLSG 143
+IPF +Q V VD +E AR ARY A H+++NE+L AHH DQ ET LL L G
Sbjct 71 YNIPFILQKVTVDKSTGIEAGARTARYKAIAEHIQANEILATAHHLNDQAETFLLALKRG 130
Query 144 SGVKGLGAMKEIEQKKNICCWRPMLSVSRQQIEHWVEHLKIPYIQDLTNFDTTYDRAWCR 203
SGVKGL AM+ + ++N+ +RP+LS ++++I+ + + ++ +I+D +N + YDR + R
Sbjct 131 SGVKGLSAMQIVSHRQNMTIFRPLLSTTKKEIQQYAKQQQLCWIEDESNQNNHYDRNFLR 190
Query 204 ETVWPVLQKRFPKMQEAISRTSILMQDADEILHEVLQQDLNQCGDLNH--LDLSRLQQLS 261
+ P+L +R+P+ + I+R++ ++L E+L ++L++ +++ L +S+ + S
Sbjct 191 NQILPLLLQRWPQFNQMIARSAKHCTAQQQLLAELLDEELHRYANIDEKSLQISQFKHFS 250
Query 262 LARQRQLLSFWMKGKAIYRPAFEMVERVQQEVICAKADAKAALHWNHHYYVRYQN-ILYR 320
+Q+QL+ W+ I P E++ + + D H +R +N L R
Sbjct 251 PLKQQQLIRLWLAKCDIPMPTSAQFEQIISGFLNSATD--------KHPQLRLKNWTLRR 302
Query 321 VEKNKYLQKDLVSNVVSTIELQMDASLQLASGVFQI--QPMQMGLSPQLFEQPLQLLPRQ 378
+K YL L + L ++ ++ L + Q+ QP Q+ + Q + LLP
Sbjct 303 FQKTLYLTPQLANTQHFCQILSVNQTIDLPDNLGQLTRQPQQI-IYQQTHKTNRLLLPES 361
Query 379 GGE-----KIHLYGRVGHW------PLKKAIQEAQILPWLRHTIQILALDNVMLGVFT 425
K+H G+V + +KK Q+A+I W R ++ ++ ++ + T
Sbjct 362 LRTVPLTIKLHQTGKVKRYQHPHSEEMKKLYQQAKIPVWQRTRTILVFFEDQLVDLLT 419
>Q7UDQ6 tRNA(Ile)-lysidine synthase [Shigella flexneri]
Length=432
Score = 182 bits (462), Expect = 8e-56
Identities = 130/404 (32%), Positives = 207/404 (51%), Gaps = 22/404 (5%)
Query 34 LIGCSGGMDSMLLLHLMSELFPHK----VRAIYIDHQLQSSSRAWGVFVQNFAQQSHIPF 89
L+ SGG+DS +LLH + + +RAI++ H L +++ AW +N QQ +P
Sbjct 16 LVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHGLSANADAWVTHCENVCQQWQVPL 75
Query 90 TIQPV-IVDTG-NLENQAREARYAAFESHLKSNEVLVLAHHQQDQTETVLLRLLSGSGVK 147
++ V + G +E QAR+ARY AF L EVLV A H DQ ET LL L GSG
Sbjct 76 VVERVQLAQEGLGIEAQARQARYQAFARTLLPGEVLVTAQHLDDQCETFLLALKRGSGPA 135
Query 148 GLGAMKEIEQKKNICCWRPMLSVSRQQIEHWVEHLKIPYIQDLTNFDTTYDRAWCRETVW 207
GL AM E+ + RP+L+ +R ++E W + +I+D +N D +YDR + R V
Sbjct 136 GLSAMAEVSEFAGTRLIRPLLARTRGELEQWALAHGLRWIEDESNQDDSYDRNFLRLRVV 195
Query 208 PVLQKRFPKMQEAISRTSILMQDADEILHEVLQQDLNQC-GDLNHLDLSRLQQLSLARQR 266
P+LQ+R+P EA +R++ L + + +L E+L DL C L ++ + +S AR+
Sbjct 196 PLLQQRWPHFAEATARSATLCAEQESLLDELLADDLAHCQTSQGTLQIAPMLAMSDARRA 255
Query 267 QLLSFWMKGKAIYRPAFEMVERVQQEVICAKADAKAALHWNHHYYVRYQNILYRVEKNKY 326
++ W+ G+ P+ + + R+ QEV A+ DA L RYQ+ L+ ++
Sbjct 256 AIIRRWLAGQNAPMPSRDALVRIWQEVALAREDASPCLRLGAFEIRRYQSQLWWIKS--- 312
Query 327 LQKDLVSNVVSTIELQMD--ASLQLASGVFQIQPMQMG-LSPQLFEQPLQLLPRQGGEKI 383
++ TI L L+L +G+ +Q G + P ++ + + + G +
Sbjct 313 -----ITGQSETIVLWQTWLQPLELPAGLGTVQLTAGGDIRPPRADEAVSVRFKAPG-LL 366
Query 384 HLYGRVGHWPLKKAIQEAQILPWLRHTIQILALDNVML---GVF 424
H+ GR G LKK QE + PWLR T +L ++ GVF
Sbjct 367 HIVGRNGGRKLKKIWQELGVPPWLRDTTPLLFYGETLIAAAGVF 410
>P52097 tRNA(Ile)-lysidine synthase [Escherichia coli (strain
K12)]
Length=432
Score = 180 bits (457), Expect = 4e-55
Identities = 128/404 (32%), Positives = 205/404 (51%), Gaps = 22/404 (5%)
Query 34 LIGCSGGMDSMLLLHLMSELFPHK----VRAIYIDHQLQSSSRAWGVFVQNFAQQSHIPF 89
L+ SGG+DS +LLH + + +RAI++ H L +++ AW +N QQ +P
Sbjct 16 LVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSANADAWVTHCENVCQQWQVPL 75
Query 90 TIQPV-IVDTG-NLENQAREARYAAFESHLKSNEVLVLAHHQQDQTETVLLRLLSGSGVK 147
++ V + G +E QAR+ARY AF L EVLV A H DQ ET LL L GSG
Sbjct 76 VVERVQLAQEGLGIEAQARQARYQAFARTLLPGEVLVTAQHLDDQCETFLLALKRGSGPA 135
Query 148 GLGAMKEIEQKKNICCWRPMLSVSRQQIEHWVEHLKIPYIQDLTNFDTTYDRAWCRETVW 207
GL AM E+ + RP+L+ +R ++ W + +I+D +N D +YDR + R V
Sbjct 136 GLSAMAEVSEFAGTRLIRPLLARTRGELVQWARQYDLRWIEDESNQDDSYDRNFLRLRVV 195
Query 208 PVLQKRFPKMQEAISRTSILMQDADEILHEVLQQDLNQC-GDLNHLDLSRLQQLSLARQR 266
P+LQ+R+P EA +R++ L + + +L E+L DL C L + + +S AR+
Sbjct 196 PLLQQRWPHFAEATARSAALCAEQESLLDELLADDLAHCQSPQGTLQIVPMLAMSDARRA 255
Query 267 QLLSFWMKGKAIYRPAFEMVERVQQEVICAKADAKAALHWNHHYYVRYQNILYRVEKNKY 326
++ W+ G+ P+ + + R+ QEV A+ DA L RYQ+ L+ ++
Sbjct 256 AIIRRWLAGQNAPMPSRDALVRIWQEVALAREDASPCLRLGAFEIRRYQSQLWWIKSVTG 315
Query 327 LQKDLVSNVVSTIELQMDA---SLQLASGVFQIQPMQMGLSPQLFEQPLQLLPRQGGEKI 383
+++V L++ A S+QL +G + P ++ + + + G +
Sbjct 316 QSENIVPWQTWLQPLELPAGLGSVQLNAG--------GDIRPPRADEAVSVRFKAPG-LL 366
Query 384 HLYGRVGHWPLKKAIQEAQILPWLRHTIQILALDNVML---GVF 424
H+ GR G LKK QE + PWLR T +L ++ GVF
Sbjct 367 HIVGRNGGRKLKKIWQELGVPPWLRDTTPLLFYGETLIAAAGVF 410
>P37563 tRNA(Ile)-lysidine synthase [Bacillus subtilis (strain
168)]
Length=472
Score = 91.3 bits (225), Expect = 5e-23
Identities = 65/250 (26%), Positives = 118/250 (47%), Gaps = 16/250 (6%)
Query 34 LIGCSGGMDSMLLLHLMSELFPHKVRAI--YIDHQLQSSSRAWGV-FVQNFAQQSHIPFT 90
++G SGG DSM LLH + L I ++DH+ + + + FVQ + + +
Sbjct 21 IVGVSGGPDSMALLHALHTLCGRSANVIAAHVDHRFRGAESEEDMRFVQAYCKAEQLVCE 80
Query 91 IQPVIVDTG------NLENQAREARYAAFESHLKSNEV--LVLAHHQQDQTETVLLRLLS 142
+ V N + AR+ RY FE + ++ L LAHH DQ ET+L++L
Sbjct 81 TAQINVTAYAQEKGLNKQAAARDCRYQFFEEIMSKHQADYLALAHHGDDQVETMLMKLAK 140
Query 143 GSGVKGLGAMKEIEQKKNICCWRPMLSVSRQQIEHWVEHLKIPYIQDLTNFDTTYDRAWC 202
G+ GL M+ + + RP L++++++I H+ + Y D +N Y R
Sbjct 141 GTLGTGLAGMQPVRRFGTGRIIRPFLTITKEEILHYCHENGLSYRTDESNAKDDYTRNRF 200
Query 203 RETVWPVLQKRFPKMQEAISRTSILMQDADEILHEVLQQDLN-----QCGDLNHLDLSRL 257
R+TV P L++ P + + + S + + ++ L + + ++N Q ++ S+L
Sbjct 201 RKTVLPFLKQESPDVHKRFQKVSEALTEDEQFLQSLTKDEMNKVITSQSNTSVEINSSQL 260
Query 258 QQLSLARQRQ 267
L + QR+
Sbjct 261 LALPMPLQRR 270
>Q9XBG6 tRNA(Ile)-lysidine synthase [Bradyrhizobium diazoefficiens
(strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792
/ USDA 110)]
Length=361
Score = 72.0 bits (175), Expect = 6e-17
Identities = 57/191 (30%), Positives = 92/191 (48%), Gaps = 14/191 (7%)
Query 19 RLLIQAQQFPADTVFLIGCSGGMDSMLLLHLMSELFPHKVRA-----IYIDHQLQSSSRA 73
+L + + PA ++ SGG DS+ L+ L + R + +DH L++ +
Sbjct 16 QLFAELKSAPA---LVLAVSGGPDSIALMWLAARWQRSLARGPRLTVVTVDHGLRAEAAR 72
Query 74 WGVFVQNFAQQSHIPFTI---QPVIVDTGNLENQAREARYAAFESHLKSNEV--LVLAHH 128
V+ A + +P + TG L AREARY +S ++ AH
Sbjct 73 EAREVKRLATELGLPHRTLRWRGAKPKTG-LPAAAREARYRLLMQAARSAGASHVLTAHT 131
Query 129 QQDQTETVLLRLLSGSGVKGLGAMKEIEQKKNICCWRPMLSVSRQQIEHWVEHLKIPYIQ 188
+ DQ ET+L+RL+ GSG+ GL AM + ++ I RP+L V + Q+ ++ KI +
Sbjct 132 RDDQAETLLMRLVRGSGLAGLSAMARLTERDGIVLARPLLDVPKAQLIATLKRAKIGFAD 191
Query 189 DLTNFDTTYDR 199
D TN DT + R
Sbjct 192 DPTNRDTAFTR 202
>Q7MR31 tRNA(Ile)-lysidine synthase [Wolinella succinogenes (strain
ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W)]
Length=326
Score = 59.3 bits (142), Expect = 6e-13
Identities = 51/206 (25%), Positives = 91/206 (44%), Gaps = 9/206 (4%)
Query 34 LIGCSGGMDSMLLLHLMSEL-FPHKVRAIYIDHQLQSSSRAWGVFVQNFAQQSHIPFTIQ 92
L+G SGG+DS L L+ E P + + + Q+ + + A +
Sbjct 19 LLGFSGGVDSTALFFLLLEREIPFDIALVNYHQRAQAKEEE--SYAKELAHRHQKRCFTL 76
Query 93 PVIVDTGNLENQAREARYAAFES--HLKSNEVLVLAHHQQDQTETVLLRLLSGSGVKGLG 150
+ N E+QAR RY FES H + L+LAHH D+ E +L+RL GS + L
Sbjct 77 SCPLGPSNFEHQARLERYRFFESLIHQEGYARLLLAHHLGDRLEWLLMRLAQGSSLSTLL 136
Query 151 AMKEIEQKKNICCWRPMLSVSRQQIEHWVEHLKIPYIQDLTNFDTTYDRAWCRETVWPVL 210
E + RP+ ++++ + ++ +I Y +D +N D R P+
Sbjct 137 GFSSREIRLGYELIRPLGEITKEALYDYLHQHQIRYFEDESNRDPKP----LRNRFRPLS 192
Query 211 QKRFPKMQEAISRTSILMQDADEILH 236
+ + + + ++ +Q+ EIL+
Sbjct 193 ETLLKEHAQGLLQSFRFLQEEREILY 218
Lambda K H a alpha
0.324 0.136 0.421 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 2270359
Database: 42cb58c9b85b37f47318bfa95ca2e0b6.SwissProt.fasta
Posted date: May 8, 2024 8:14 PM
Number of letters in database: 6,316
Number of sequences in database: 15
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
