BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: aa0ca6842685f643f4af1330f10c2417.SwissProt.fasta
17 sequences; 1,830 total letters
Query= ACIAD3037
Length=113
Score E
Sequences producing significant alignments: (Bits) Value
P07887 Thioredoxin C-2 [Corynebacterium nephridii] 202 3e-73
Q9X2T1 Thioredoxin [Pseudomonas aeruginosa (strain ATCC 15692 / D... 137 2e-47
Q9CM49 Thioredoxin [Pasteurella multocida (strain Pm70)] 124 5e-42
P43785 Thioredoxin [Haemophilus influenzae (strain ATCC 51907 / D... 118 7e-40
P0AA27 Thioredoxin 1 [Escherichia coli O157:H7] 118 1e-39
P0AA30 Thioredoxin 1 [Shigella flexneri] 118 1e-39
P0AA29 Thioredoxin 1 [Salmonella typhi] 118 1e-39
P0AA25 Thioredoxin 1 [Escherichia coli (strain K12)] 118 1e-39
P0AA28 Thioredoxin 1 [Salmonella typhimurium (strain LT2 / SGSC14... 118 1e-39
P52231 Thioredoxin [Synechocystis sp. (strain PCC 6803 / Kazusa)] 116 6e-39
P33791 Thioredoxin [Kitasatospora aureofaciens] 115 2e-38
P08058 Thioredoxin [Cereibacter sphaeroides] 114 2e-38
P00275 Thioredoxin C-1 [Corynebacterium nephridii] 114 3e-38
Q8KE49 Thioredoxin 2 [Chlorobaculum tepidum (strain ATCC 49652 / ... 114 5e-38
P10472 Thioredoxin [Chlorobaculum thiosulfatiphilum] 111 6e-37
P0A4L2 Thioredoxin 1 [Nostoc sp. (strain ATCC 29151 / PCC 7119)] 110 1e-36
P52233 Thioredoxin [Acidithiobacillus ferridurans] 109 3e-36
>P07887 Thioredoxin C-2 [Corynebacterium nephridii]
Length=108
Score = 202 bits (515), Expect = 3e-73
Identities = 98/108 (91%), Positives = 104/108 (96%), Gaps = 0/108 (0%)
Query 5 MSANIVNTTDANFQADVLDAETPVLVDFWAGWCAPCKAIAPVLEDLSREYEGKVKIVKVD 64
MSA IVNTTD NFQADVLDAETPVLVDFWAGWCAPCKAIAPVLE+LS EY GKVKIVKVD
Sbjct 1 MSATIVNTTDENFQADVLDAETPVLVDFWAGWCAPCKAIAPVLEELSNEYAGKVKIVKVD 60
Query 65 VTACEDTAVKYNIRNIPALLLFKDGKVVAQQVGAAPRSKLAAFIDENV 112
VT+CEDTAVKYNIRNIPALL+FKDG+VVAQQVGAAPRSKLAAFID+N+
Sbjct 61 VTSCEDTAVKYNIRNIPALLMFKDGEVVAQQVGAAPRSKLAAFIDQNI 108
>Q9X2T1 Thioredoxin [Pseudomonas aeruginosa (strain ATCC 15692
/ DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS
101 / PAO1)]
Length=108
Score = 137 bits (346), Expect = 2e-47
Identities = 61/108 (56%), Positives = 85/108 (79%), Gaps = 0/108 (0%)
Query 5 MSANIVNTTDANFQADVLDAETPVLVDFWAGWCAPCKAIAPVLEDLSREYEGKVKIVKVD 64
MS +IVN TDA+F+ DVL A+ PVLVD+WA WC PCK IAPVL++++R+Y+GK+K+ K++
Sbjct 1 MSEHIVNVTDASFEQDVLKADGPVLVDYWAEWCGPCKMIAPVLDEVARDYQGKLKVCKLN 60
Query 65 VTACEDTAVKYNIRNIPALLLFKDGKVVAQQVGAAPRSKLAAFIDENV 112
+ +DT KY +R IP L+LFKDG V A +VGA +S+LAAF+D N+
Sbjct 61 IDENQDTPPKYGVRGIPTLMLFKDGNVEATKVGALSKSQLAAFLDANI 108
>Q9CM49 Thioredoxin [Pasteurella multocida (strain Pm70)]
Length=106
Score = 124 bits (310), Expect = 5e-42
Identities = 50/104 (48%), Positives = 83/104 (80%), Gaps = 0/104 (0%)
Query 9 IVNTTDANFQADVLDAETPVLVDFWAGWCAPCKAIAPVLEDLSREYEGKVKIVKVDVTAC 68
++++TDA F ADV++++ PVL+DFWA WC PC+ I+P+L++++ E+ GKVK+VK+++
Sbjct 3 VLHSTDATFTADVVNSDVPVLLDFWAPWCGPCRMISPILDEIAAEFSGKVKVVKINIDEN 62
Query 69 EDTAVKYNIRNIPALLLFKDGKVVAQQVGAAPRSKLAAFIDENV 112
+ T + +R+IP L+LFK+GK VA QVGA P+++LA FI++N+
Sbjct 63 QATPAQLGVRSIPTLVLFKNGKAVATQVGALPKNQLANFINQNI 106
>P43785 Thioredoxin [Haemophilus influenzae (strain ATCC 51907
/ DSM 11121 / KW20 / Rd)]
Length=107
Score = 118 bits (296), Expect = 7e-40
Identities = 51/106 (48%), Positives = 84/106 (79%), Gaps = 0/106 (0%)
Query 7 ANIVNTTDANFQADVLDAETPVLVDFWAGWCAPCKAIAPVLEDLSREYEGKVKIVKVDVT 66
+ +++ DA+F++ V++++ P+L+DFWA WC PCK IAPVL++L+ E+ GKVKIVK++V
Sbjct 2 SEVLHINDADFESVVVNSDIPILLDFWAPWCGPCKMIAPVLDELAPEFAGKVKIVKMNVD 61
Query 67 ACEDTAVKYNIRNIPALLLFKDGKVVAQQVGAAPRSKLAAFIDENV 112
+ T ++ +R+IP LLL K+G+VVA QVGA P+++LA FI++++
Sbjct 62 DNQATPAQFGVRSIPTLLLIKNGQVVATQVGALPKTQLANFINQHI 107
>P0AA27 Thioredoxin 1 [Escherichia coli O157:H7]
Length=109
Score = 118 bits (295), Expect = 1e-39
Identities = 53/108 (49%), Positives = 76/108 (70%), Gaps = 0/108 (0%)
Query 5 MSANIVNTTDANFQADVLDAETPVLVDFWAGWCAPCKAIAPVLEDLSREYEGKVKIVKVD 64
MS I++ TD +F DVL A+ +LVDFWA WC PCK IAP+L++++ EY+GK+ + K++
Sbjct 1 MSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLN 60
Query 65 VTACEDTAVKYNIRNIPALLLFKDGKVVAQQVGAAPRSKLAAFIDENV 112
+ TA KY IR IP LLLFK+G+V A +VGA + +L F+D N+
Sbjct 61 IDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 108
>P0AA30 Thioredoxin 1 [Shigella flexneri]
Length=109
Score = 118 bits (295), Expect = 1e-39
Identities = 53/108 (49%), Positives = 76/108 (70%), Gaps = 0/108 (0%)
Query 5 MSANIVNTTDANFQADVLDAETPVLVDFWAGWCAPCKAIAPVLEDLSREYEGKVKIVKVD 64
MS I++ TD +F DVL A+ +LVDFWA WC PCK IAP+L++++ EY+GK+ + K++
Sbjct 1 MSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLN 60
Query 65 VTACEDTAVKYNIRNIPALLLFKDGKVVAQQVGAAPRSKLAAFIDENV 112
+ TA KY IR IP LLLFK+G+V A +VGA + +L F+D N+
Sbjct 61 IDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 108
>P0AA29 Thioredoxin 1 [Salmonella typhi]
Length=109
Score = 118 bits (295), Expect = 1e-39
Identities = 53/108 (49%), Positives = 76/108 (70%), Gaps = 0/108 (0%)
Query 5 MSANIVNTTDANFQADVLDAETPVLVDFWAGWCAPCKAIAPVLEDLSREYEGKVKIVKVD 64
MS I++ TD +F DVL A+ +LVDFWA WC PCK IAP+L++++ EY+GK+ + K++
Sbjct 1 MSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLN 60
Query 65 VTACEDTAVKYNIRNIPALLLFKDGKVVAQQVGAAPRSKLAAFIDENV 112
+ TA KY IR IP LLLFK+G+V A +VGA + +L F+D N+
Sbjct 61 IDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 108
>P0AA25 Thioredoxin 1 [Escherichia coli (strain K12)]
Length=109
Score = 118 bits (295), Expect = 1e-39
Identities = 53/108 (49%), Positives = 76/108 (70%), Gaps = 0/108 (0%)
Query 5 MSANIVNTTDANFQADVLDAETPVLVDFWAGWCAPCKAIAPVLEDLSREYEGKVKIVKVD 64
MS I++ TD +F DVL A+ +LVDFWA WC PCK IAP+L++++ EY+GK+ + K++
Sbjct 1 MSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLN 60
Query 65 VTACEDTAVKYNIRNIPALLLFKDGKVVAQQVGAAPRSKLAAFIDENV 112
+ TA KY IR IP LLLFK+G+V A +VGA + +L F+D N+
Sbjct 61 IDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 108
>P0AA28 Thioredoxin 1 [Salmonella typhimurium (strain LT2 / SGSC1412
/ ATCC 700720)]
Length=109
Score = 118 bits (295), Expect = 1e-39
Identities = 53/108 (49%), Positives = 76/108 (70%), Gaps = 0/108 (0%)
Query 5 MSANIVNTTDANFQADVLDAETPVLVDFWAGWCAPCKAIAPVLEDLSREYEGKVKIVKVD 64
MS I++ TD +F DVL A+ +LVDFWA WC PCK IAP+L++++ EY+GK+ + K++
Sbjct 1 MSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLN 60
Query 65 VTACEDTAVKYNIRNIPALLLFKDGKVVAQQVGAAPRSKLAAFIDENV 112
+ TA KY IR IP LLLFK+G+V A +VGA + +L F+D N+
Sbjct 61 IDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 108
>P52231 Thioredoxin [Synechocystis sp. (strain PCC 6803 / Kazusa)]
Length=107
Score = 116 bits (290), Expect = 6e-39
Identities = 50/98 (51%), Positives = 77/98 (79%), Gaps = 0/98 (0%)
Query 13 TDANFQADVLDAETPVLVDFWAGWCAPCKAIAPVLEDLSREYEGKVKIVKVDVTACEDTA 72
+DA+F+ DVLD+E PVLVDFWA WC PC+ +APV++++S++YEGKVK+VK++ +TA
Sbjct 8 SDASFKEDVLDSELPVLVDFWAPWCGPCRMVAPVVDEISQQYEGKVKVVKLNTDENPNTA 67
Query 73 VKYNIRNIPALLLFKDGKVVAQQVGAAPRSKLAAFIDE 110
+Y IR+IP L++FK G+ V VGA P++ LA+ +++
Sbjct 68 SQYGIRSIPTLMIFKGGQRVDMVVGAVPKTTLASTLEK 105
>P33791 Thioredoxin [Kitasatospora aureofaciens]
Length=106
Score = 115 bits (287), Expect = 2e-38
Identities = 51/103 (50%), Positives = 75/103 (73%), Gaps = 0/103 (0%)
Query 10 VNTTDANFQADVLDAETPVLVDFWAGWCAPCKAIAPVLEDLSREYEGKVKIVKVDVTACE 69
V T+A F++DVL+++ PVLV F WC PCK +APVL++++ EYEGKVK+ KV+
Sbjct 4 VKVTNATFKSDVLESDKPVLVHFEGPWCGPCKMVAPVLDEIANEYEGKVKVAKVNTDENP 63
Query 70 DTAVKYNIRNIPALLLFKDGKVVAQQVGAAPRSKLAAFIDENV 112
A +Y +R+IP L+FK G+V A VGAAP+++LAAF+D ++
Sbjct 64 QLASQYGVRSIPTRLMFKGGEVAANMVGAAPKTRLAAFLDASL 106
Score = 14.2 bits (25), Expect = 7.3
Identities = 7/20 (35%), Positives = 10/20 (50%), Gaps = 0/20 (0%)
Query 5 MSANIVNTTDANFQADVLDA 24
++AN+V A LDA
Sbjct 85 VAANMVGAAPKTRLAAFLDA 104
>P08058 Thioredoxin [Cereibacter sphaeroides]
Length=106
Score = 114 bits (286), Expect = 2e-38
Identities = 53/99 (54%), Positives = 71/99 (72%), Gaps = 0/99 (0%)
Query 10 VNTTDANFQADVLDAETPVLVDFWAGWCAPCKAIAPVLEDLSREYEGKVKIVKVDVTACE 69
V TDA F +V ++ PV+VDFWA WC PC+ I P LE+LS+EY GKVKIVKV+V
Sbjct 4 VPVTDATFDTEVRKSDVPVVVDFWAEWCGPCRQIGPALEELSKEYAGKVKIVKVNVDENP 63
Query 70 DTAVKYNIRNIPALLLFKDGKVVAQQVGAAPRSKLAAFI 108
++ +R IPAL LFK+G+VV+ +VGAAP++ LA +I
Sbjct 64 ESPAMLGVRGIPALFLFKNGQVVSNKVGAAPKAALATWI 102
>P00275 Thioredoxin C-1 [Corynebacterium nephridii]
Length=105
Score = 114 bits (285), Expect = 3e-38
Identities = 50/99 (51%), Positives = 73/99 (74%), Gaps = 0/99 (0%)
Query 10 VNTTDANFQADVLDAETPVLVDFWAGWCAPCKAIAPVLEDLSREYEGKVKIVKVDVTACE 69
V ++NFQ+DVL + PV+VDFWA WC PCK IAP L++++ E G+VKI KV++
Sbjct 3 VKVDNSNFQSDVLQSSEPVVVDFWAEWCGPCKMIAPALDEIATEMAGQVKIAKVNIDENP 62
Query 70 DTAVKYNIRNIPALLLFKDGKVVAQQVGAAPRSKLAAFI 108
+ A ++ +R+IP LL+FKDG++ A VGAAP+S+LA +I
Sbjct 63 ELAAQFGVRSIPTLLMFKDGELAANMVGAAPKSRLADWI 101
>Q8KE49 Thioredoxin 2 [Chlorobaculum tepidum (strain ATCC 49652
/ DSM 12025 / NBRC 103806 / TLS)]
Length=109
Score = 114 bits (284), Expect = 5e-38
Identities = 51/108 (47%), Positives = 74/108 (69%), Gaps = 0/108 (0%)
Query 5 MSANIVNTTDANFQADVLDAETPVLVDFWAGWCAPCKAIAPVLEDLSREYEGKVKIVKVD 64
MS TD NFQA++L+++ LVDFWA WC PC + PV+E+L+ +YEGK I K++
Sbjct 1 MSGKYFEATDQNFQAEILNSDKVALVDFWAAWCGPCMMLGPVIEELAGDYEGKAIIAKLN 60
Query 65 VTACEDTAVKYNIRNIPALLLFKDGKVVAQQVGAAPRSKLAAFIDENV 112
V +TA +Y IR+IP +L+ K GKVV Q VGA P++ +A +DE++
Sbjct 61 VDENPNTAGQYGIRSIPTMLIIKGGKVVDQMVGALPKNMIAKKLDEHI 108
>P10472 Thioredoxin [Chlorobaculum thiosulfatiphilum]
Length=108
Score = 111 bits (277), Expect = 6e-37
Identities = 50/100 (50%), Positives = 70/100 (70%), Gaps = 0/100 (0%)
Query 13 TDANFQADVLDAETPVLVDFWAGWCAPCKAIAPVLEDLSREYEGKVKIVKVDVTACEDTA 72
TD NFQ ++LD++ VLVDFWA WC PC + PV+E L+ +YEGK I K++V + A
Sbjct 8 TDKNFQTEILDSDKAVLVDFWASWCGPCMMLGPVIEQLADDYEGKAIIAKLNVDENPNIA 67
Query 73 VKYNIRNIPALLLFKDGKVVAQQVGAAPRSKLAAFIDENV 112
+Y IR+IP +L+ K GKVV Q VGA P++ +A IDE++
Sbjct 68 GQYGIRSIPTMLIIKGGKVVDQMVGALPKNMIAKKIDEHI 107
>P0A4L2 Thioredoxin 1 [Nostoc sp. (strain ATCC 29151 / PCC 7119)]
Length=107
Score = 110 bits (275), Expect = 1e-36
Identities = 45/100 (45%), Positives = 75/100 (75%), Gaps = 0/100 (0%)
Query 13 TDANFQADVLDAETPVLVDFWAGWCAPCKAIAPVLEDLSREYEGKVKIVKVDVTACEDTA 72
TD+ F+ +VLD++ PVLVDFWA WC PC+ +APV+++++++YEGK+K+VKV+ A
Sbjct 8 TDSTFKQEVLDSDVPVLVDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNTDENPQVA 67
Query 73 VKYNIRNIPALLLFKDGKVVAQQVGAAPRSKLAAFIDENV 112
+Y IR+IP L++FK G+ V VGA P++ L+ +++++
Sbjct 68 SQYGIRSIPTLMIFKGGQKVDMVVGAVPKTTLSQTLEKHL 107
>P52233 Thioredoxin [Acidithiobacillus ferridurans]
Length=108
Score = 109 bits (272), Expect = 3e-36
Identities = 50/108 (46%), Positives = 74/108 (69%), Gaps = 0/108 (0%)
Query 5 MSANIVNTTDANFQADVLDAETPVLVDFWAGWCAPCKAIAPVLEDLSREYEGKVKIVKVD 64
MS I+ +D +F+ DVL + PVLVDFWA WC PCK IAP+LE+++ EY ++++ K +
Sbjct 1 MSDAILYVSDDSFETDVLKSSKPVLVDFWAEWCGPCKMIAPILEEIADEYADRLRVAKFN 60
Query 65 VTACEDTAVKYNIRNIPALLLFKDGKVVAQQVGAAPRSKLAAFIDENV 112
+ +T +Y IR IP LLLFK GK+ A +VGA +++L AF+D +
Sbjct 61 IDENPNTPPQYAIRGIPTLLLFKAGKLEATKVGALSKAQLTAFLDSQL 108
Lambda K H a alpha
0.323 0.136 0.409 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 112308
Database: aa0ca6842685f643f4af1330f10c2417.SwissProt.fasta
Posted date: May 19, 2024 9:25 PM
Number of letters in database: 1,830
Number of sequences in database: 17
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
