BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 778c056c8e3069c48c207663a05bfb7f.TrEMBL.fasta
11 sequences; 1,736 total letters
Query= ACIAD3045
Length=66
Score E
Sequences producing significant alignments: (Bits) Value
Q6F869 Uncharacterized protein [Acinetobacter baylyi (strain ATCC... 139 1e-49
A0A7G2SGL5 Uncharacterized protein [Acinetobacter sp] 139 1e-49
A0A446ZN86 Swarming motility protein YbiA [Acinetobacter calcoace... 50.1 4e-13
A0A137YLH8 NADAR domain-containing protein [Acinetobacter venetia... 49.7 5e-13
A0A0M3AFF8 NADAR domain-containing protein [Acinetobacter sp. AG1] 49.7 5e-13
A0A150HMH4 Swarming motility protein YbiA [Acinetobacter venetianus] 48.5 6e-13
D8JG63 NADAR domain-containing protein [Acinetobacter oleivorans ... 49.3 7e-13
V2V7Z4 NADAR domain-containing protein [Acinetobacter tjernbergia... 49.3 7e-13
A0A372BM47 NADAR family protein [Acinetobacter sp. JW] 48.9 1e-12
A0A3S0U140 NADAR family protein [Acinetobacter sp] 48.9 1e-12
N8YH07 NADAR domain-containing protein [Acinetobacter venetianus ... 48.1 2e-12
>Q6F869 Uncharacterized protein [Acinetobacter baylyi (strain
ATCC 33305 / BD413 / ADP1)]
Length=65
Score = 139 bits (351), Expect = 1e-49
Identities = 65/65 (100%), Positives = 65/65 (100%), Gaps = 0/65 (0%)
Query 1 MVAFCISTDIKHLTAGHCEMLFRMIGMTEEHLNIQNPKQWSGLNLLGFVLIHVWKSLKIT 60
MVAFCISTDIKHLTAGHCEMLFRMIGMTEEHLNIQNPKQWSGLNLLGFVLIHVWKSLKIT
Sbjct 1 MVAFCISTDIKHLTAGHCEMLFRMIGMTEEHLNIQNPKQWSGLNLLGFVLIHVWKSLKIT 60
Query 61 DDQQD 65
DDQQD
Sbjct 61 DDQQD 65
>A0A7G2SGL5 Uncharacterized protein [Acinetobacter sp]
Length=65
Score = 139 bits (351), Expect = 1e-49
Identities = 65/65 (100%), Positives = 65/65 (100%), Gaps = 0/65 (0%)
Query 1 MVAFCISTDIKHLTAGHCEMLFRMIGMTEEHLNIQNPKQWSGLNLLGFVLIHVWKSLKIT 60
MVAFCISTDIKHLTAGHCEMLFRMIGMTEEHLNIQNPKQWSGLNLLGFVLIHVWKSLKIT
Sbjct 1 MVAFCISTDIKHLTAGHCEMLFRMIGMTEEHLNIQNPKQWSGLNLLGFVLIHVWKSLKIT 60
Query 61 DDQQD 65
DDQQD
Sbjct 61 DDQQD 65
>A0A446ZN86 Swarming motility protein YbiA [Acinetobacter calcoaceticus]
Length=185
Score = 50.1 bits (118), Expect = 4e-13
Identities = 20/29 (69%), Positives = 25/29 (86%), Gaps = 0/29 (0%)
Query 25 IGMTEEHLNIQNPKQWSGLNLLGFVLIHV 53
IGM ++HL+IQ+P QW GLNLLGF L+HV
Sbjct 150 IGMAQDHLHIQDPSQWQGLNLLGFALMHV 178
>A0A137YLH8 NADAR domain-containing protein [Acinetobacter venetianus]
Length=184
Score = 49.7 bits (117), Expect = 5e-13
Identities = 21/33 (64%), Positives = 27/33 (82%), Gaps = 0/33 (0%)
Query 25 IGMTEEHLNIQNPKQWSGLNLLGFVLIHVWKSL 57
+GM +EH +IQ+P QW GLNLLGFVL+HV + L
Sbjct 150 VGMAQEHEHIQDPSQWLGLNLLGFVLMHVREQL 182
>A0A0M3AFF8 NADAR domain-containing protein [Acinetobacter sp.
AG1]
Length=185
Score = 49.7 bits (117), Expect = 5e-13
Identities = 20/30 (67%), Positives = 24/30 (80%), Gaps = 0/30 (0%)
Query 25 IGMTEEHLNIQNPKQWSGLNLLGFVLIHVW 54
IGM ++H +IQ+P QW GLNLLGF LI VW
Sbjct 150 IGMAQDHEHIQDPNQWQGLNLLGFALIQVW 179
>A0A150HMH4 Swarming motility protein YbiA [Acinetobacter venetianus]
Length=122
Score = 48.5 bits (114), Expect = 6e-13
Identities = 20/33 (61%), Positives = 26/33 (79%), Gaps = 0/33 (0%)
Query 25 IGMTEEHLNIQNPKQWSGLNLLGFVLIHVWKSL 57
+GM +EH +IQ+P QW GLNLLGF L+HV + L
Sbjct 88 VGMAQEHKHIQDPSQWLGLNLLGFALMHVREQL 120
>D8JG63 NADAR domain-containing protein [Acinetobacter oleivorans
(strain JCM 16667 / KCTC 23045 / DR1)]
Length=186
Score = 49.3 bits (116), Expect = 7e-13
Identities = 21/33 (64%), Positives = 27/33 (82%), Gaps = 0/33 (0%)
Query 25 IGMTEEHLNIQNPKQWSGLNLLGFVLIHVWKSL 57
IGM ++H +IQ+P QW GLNLLGFVL+HV + L
Sbjct 151 IGMAQDHPHIQDPSQWQGLNLLGFVLMHVRERL 183
>V2V7Z4 NADAR domain-containing protein [Acinetobacter tjernbergiae
DSM 14971 = CIP 107465]
Length=187
Score = 49.3 bits (116), Expect = 7e-13
Identities = 20/29 (69%), Positives = 25/29 (86%), Gaps = 0/29 (0%)
Query 25 IGMTEEHLNIQNPKQWSGLNLLGFVLIHV 53
IGM+++H IQ+PKQW GLNLLGF L+HV
Sbjct 150 IGMSQDHEQIQDPKQWKGLNLLGFALMHV 178
>A0A372BM47 NADAR family protein [Acinetobacter sp. JW]
Length=185
Score = 48.9 bits (115), Expect = 1e-12
Identities = 19/29 (66%), Positives = 24/29 (83%), Gaps = 0/29 (0%)
Query 25 IGMTEEHLNIQNPKQWSGLNLLGFVLIHV 53
+GM ++H +IQNP QW GLNLLGF L+HV
Sbjct 150 VGMAQDHPHIQNPSQWQGLNLLGFTLMHV 178
>A0A3S0U140 NADAR family protein [Acinetobacter sp]
Length=188
Score = 48.9 bits (115), Expect = 1e-12
Identities = 20/29 (69%), Positives = 24/29 (83%), Gaps = 0/29 (0%)
Query 25 IGMTEEHLNIQNPKQWSGLNLLGFVLIHV 53
IGM ++H IQ+PKQW GLNLLGF L+HV
Sbjct 151 IGMAQDHEQIQDPKQWKGLNLLGFALMHV 179
>N8YH07 NADAR domain-containing protein [Acinetobacter venetianus
(strain ATCC 31012 / DSM 23050 / BCRC 14357 / CCUG 45561
/ CIP 110063 / KCTC 2702 / LMG 19082 / RAG-1)]
Length=184
Score = 48.1 bits (113), Expect = 2e-12
Identities = 20/33 (61%), Positives = 26/33 (79%), Gaps = 0/33 (0%)
Query 25 IGMTEEHLNIQNPKQWSGLNLLGFVLIHVWKSL 57
+GM +EH +IQ+P QW GLNLLGF L+HV + L
Sbjct 150 VGMAQEHEHIQDPSQWLGLNLLGFALMHVREQL 182
Lambda K H a alpha
0.334 0.144 0.479 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 59901
Database: 778c056c8e3069c48c207663a05bfb7f.TrEMBL.fasta
Posted date: May 20, 2024 1:44 AM
Number of letters in database: 1,736
Number of sequences in database: 11
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
