BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 66620a85dde11aadcc50470088d0017a.SwissProt.fasta
           24 sequences; 4,359 total letters



Query= ACIAD3054

Length=184
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q6F861 Translation initiation factor IF-3 [Acinetobacter baylyi (...  357     9e-132
B0V5P1 Translation initiation factor IF-3 [Acinetobacter baumanni...  347     8e-128
B0VV99 Translation initiation factor IF-3 [Acinetobacter baumanni...  347     8e-128
B1J6U5 Translation initiation factor IF-3 [Pseudomonas putida (st...  231     1e-81 
Q1IC14 Translation initiation factor IF-3 [Pseudomonas entomophil...  230     2e-81 
Q88K26 Translation initiation factor IF-3 [Pseudomonas putida (st...  229     5e-81 
B0KKR7 Translation initiation factor IF-3 [Pseudomonas putida (st...  229     5e-81 
A5W5E0 Translation initiation factor IF-3 [Pseudomonas putida (st...  229     5e-81 
Q9I0A0 Translation initiation factor IF-3 [Pseudomonas aeruginosa...  226     1e-79 
Q8RQ01 Translation initiation factor IF-3 [Azotobacter vinelandii]    220     2e-77 
Q9X6E7 Translation initiation factor IF-3 [Pseudomonas protegens ...  220     2e-77 
Q4KEW3 Translation initiation factor IF-3 [Pseudomonas fluorescen...  220     2e-77 
C3JZN6 Translation initiation factor IF-3 [Pseudomonas fluorescen...  218     8e-77 
P0A132 Translation initiation factor IF-3 [Pseudomonas syringae p...  218     1e-76 
P0A133 Translation initiation factor IF-3 [Pseudomonas syringae p...  218     1e-76 
P33321 Translation initiation factor IF-3 [Salmonella typhimurium...  213     1e-74 
P0A707 Translation initiation factor IF-3 [Escherichia coli (stra...  212     2e-74 
O68844 Translation initiation factor IF-3 [Vibrio cholerae seroty...  211     5e-74 
P33318 Translation initiation factor IF-3 [Klebsiella pneumoniae]     210     1e-73 
P33319 Translation initiation factor IF-3 [Proteus hauseri]           204     3e-71 
P46243 Translation initiation factor IF-3 [Buchnera aphidicola su...  204     4e-71 
P33320 Translation initiation factor IF-3 [Serratia marcescens]       200     2e-69 
O33567 Translation initiation factor IF-3 [Cereibacter sphaeroide...  196     4e-68 
Q70YI5 Translation initiation factor IF-3 [Thermus thermophilus]      164     2e-55 


>Q6F861 Translation initiation factor IF-3 [Acinetobacter baylyi 
(strain ATCC 33305 / BD413 / ADP1)]
Length=183

 Score = 357 bits (917),  Expect = 9e-132
 Identities = 182/183 (99%), Positives = 183/183 (100%), Gaps = 0/183 (0%)

Query  1    IKQPDRNQQQGAKSNRPAINDEIRSKEVRLVGADGEQKGIVSLNEALRAAEEVELDLVEI  60
            +KQPDRNQQQGAKSNRPAINDEIRSKEVRLVGADGEQKGIVSLNEALRAAEEVELDLVEI
Sbjct  1    MKQPDRNQQQGAKSNRPAINDEIRSKEVRLVGADGEQKGIVSLNEALRAAEEVELDLVEI  60

Query  61   VANAEPPVCKIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILK  120
            VANAEPPVCKIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILK
Sbjct  61   VANAEPPVCKIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILK  120

Query  121  FLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADVTEYGVVEQAPKMEGRQMGMLLGPK  180
            FLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADVTEYGVVEQAPKMEGRQMGMLLGPK
Sbjct  121  FLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADVTEYGVVEQAPKMEGRQMGMLLGPK  180

Query  181  KKK  183
            KKK
Sbjct  181  KKK  183


>B0V5P1 Translation initiation factor IF-3 [Acinetobacter baumannii 
(strain AYE)]
Length=183

 Score = 347 bits (891),  Expect = 8e-128
 Identities = 176/183 (96%), Positives = 180/183 (98%), Gaps = 0/183 (0%)

Query  1    IKQPDRNQQQGAKSNRPAINDEIRSKEVRLVGADGEQKGIVSLNEALRAAEEVELDLVEI  60
            +KQPDRNQQQGAKSNRPAINDEIR+KEVRLVGADGEQKGIVSLNEALRAAE+ +LDLVEI
Sbjct  1    MKQPDRNQQQGAKSNRPAINDEIRAKEVRLVGADGEQKGIVSLNEALRAAEDADLDLVEI  60

Query  61   VANAEPPVCKIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILK  120
            VANAEPPVCKIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILK
Sbjct  61   VANAEPPVCKIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILK  120

Query  121  FLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADVTEYGVVEQAPKMEGRQMGMLLGPK  180
            FLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADV E GVVEQAPKMEGRQMGMLLGPK
Sbjct  121  FLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADVAELGVVEQAPKMEGRQMGMLLGPK  180

Query  181  KKK  183
            KKK
Sbjct  181  KKK  183


>B0VV99 Translation initiation factor IF-3 [Acinetobacter baumannii 
(strain SDF)]
Length=183

 Score = 347 bits (891),  Expect = 8e-128
 Identities = 176/183 (96%), Positives = 180/183 (98%), Gaps = 0/183 (0%)

Query  1    IKQPDRNQQQGAKSNRPAINDEIRSKEVRLVGADGEQKGIVSLNEALRAAEEVELDLVEI  60
            +KQPDRNQQQGAKSNRPAINDEIR+KEVRLVGADGEQKGIVSLNEALRAAE+ +LDLVEI
Sbjct  1    MKQPDRNQQQGAKSNRPAINDEIRAKEVRLVGADGEQKGIVSLNEALRAAEDADLDLVEI  60

Query  61   VANAEPPVCKIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILK  120
            VANAEPPVCKIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILK
Sbjct  61   VANAEPPVCKIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILK  120

Query  121  FLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADVTEYGVVEQAPKMEGRQMGMLLGPK  180
            FLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADV E GVVEQAPKMEGRQMGMLLGPK
Sbjct  121  FLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADVAELGVVEQAPKMEGRQMGMLLGPK  180

Query  181  KKK  183
            KKK
Sbjct  181  KKK  183


>B1J6U5 Translation initiation factor IF-3 [Pseudomonas putida 
(strain W619)]
Length=183

 Score = 231 bits (588),  Expect = 1e-81
 Identities = 112/183 (61%), Positives = 148/183 (81%), Gaps = 2/183 (1%)

Query  1    IKQPDRNQQQGAKSNRPAINDEIRSKEVRLVGADGEQKGIVSLNEALRAAEEVELDLVEI  60
            IK+  RN ++ A   +  IN+ I ++EVRL+GADGEQ GIVS++EALR A+E +LDLVEI
Sbjct  3    IKREMRNDKRAAP--KAPINENISAREVRLIGADGEQVGIVSIDEALRIADEAKLDLVEI  60

Query  61   VANAEPPVCKIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILK  120
             A+A PPVCK+MDY KHLF+ K++  +AKK Q Q+Q+KEIK RP T+ GDYQVKLR +++
Sbjct  61   SADAVPPVCKVMDYGKHLFEKKKQANEAKKNQKQIQIKEIKFRPGTEDGDYQVKLRNLVR  120

Query  121  FLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADVTEYGVVEQAPKMEGRQMGMLLGPK  180
            FL +G+K KI+LRFRGREMAHQ+LG+  L+++EAD+ EYG VEQ PKMEGRQ+ M++ PK
Sbjct  121  FLTDGDKAKISLRFRGREMAHQELGMELLKRVEADLAEYGTVEQHPKMEGRQLMMVIAPK  180

Query  181  KKK  183
            KKK
Sbjct  181  KKK  183


>Q1IC14 Translation initiation factor IF-3 [Pseudomonas entomophila 
(strain L48)]
Length=183

 Score = 230 bits (587),  Expect = 2e-81
 Identities = 111/183 (61%), Positives = 148/183 (81%), Gaps = 2/183 (1%)

Query  1    IKQPDRNQQQGAKSNRPAINDEIRSKEVRLVGADGEQKGIVSLNEALRAAEEVELDLVEI  60
            IK+  RN ++ A   +  IN+ I ++EVRL+GADGEQ GIVS++EALR A+E +LDLVEI
Sbjct  3    IKREMRNDKRTAP--KAPINENISAREVRLIGADGEQIGIVSIDEALRIADEAKLDLVEI  60

Query  61   VANAEPPVCKIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILK  120
             A+A+PPVCK+MDY KHLF+ K++  +AKK Q Q+Q+KEIK RP T+ GDYQVKLR +++
Sbjct  61   SADAQPPVCKVMDYGKHLFEKKKQANEAKKNQKQIQIKEIKFRPGTEEGDYQVKLRNLVR  120

Query  121  FLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADVTEYGVVEQAPKMEGRQMGMLLGPK  180
            FL +G+K KI+LRFRGREMAHQ+LG+  L+++E D+ EYG VEQ PKMEGRQ+ M++ PK
Sbjct  121  FLSDGDKAKISLRFRGREMAHQELGMELLKRVETDLAEYGTVEQHPKMEGRQLMMVIAPK  180

Query  181  KKK  183
            KKK
Sbjct  181  KKK  183


>Q88K26 Translation initiation factor IF-3 [Pseudomonas putida 
(strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)]
Length=183

 Score = 229 bits (584),  Expect = 5e-81
 Identities = 111/183 (61%), Positives = 147/183 (80%), Gaps = 2/183 (1%)

Query  1    IKQPDRNQQQGAKSNRPAINDEIRSKEVRLVGADGEQKGIVSLNEALRAAEEVELDLVEI  60
            IK+  RN ++     +  IN+ I ++EVRL+GADGEQ GIVS++EALR A+E +LDLVEI
Sbjct  3    IKREMRNDKRAVP--KAPINENISAREVRLIGADGEQVGIVSIDEALRIADEAKLDLVEI  60

Query  61   VANAEPPVCKIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILK  120
             A+A PPVCK+MDY KHLF+ K++  +AKK Q Q+Q+KEIK RP T+ GDYQVKLR +++
Sbjct  61   SADAVPPVCKVMDYGKHLFEKKKQANEAKKNQKQIQIKEIKFRPGTEDGDYQVKLRNLVR  120

Query  121  FLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADVTEYGVVEQAPKMEGRQMGMLLGPK  180
            FL +G+K KI+LRFRGREMAHQ+LG+  L+++EAD+ EYG VEQ PKMEGRQ+ M++ PK
Sbjct  121  FLTDGDKAKISLRFRGREMAHQELGMELLKRVEADLAEYGTVEQHPKMEGRQLMMVIAPK  180

Query  181  KKK  183
            KKK
Sbjct  181  KKK  183


>B0KKR7 Translation initiation factor IF-3 [Pseudomonas putida 
(strain GB-1)]
Length=183

 Score = 229 bits (584),  Expect = 5e-81
 Identities = 111/183 (61%), Positives = 147/183 (80%), Gaps = 2/183 (1%)

Query  1    IKQPDRNQQQGAKSNRPAINDEIRSKEVRLVGADGEQKGIVSLNEALRAAEEVELDLVEI  60
            IK+  RN ++     +  IN+ I ++EVRL+GADGEQ GIVS++EALR A+E +LDLVEI
Sbjct  3    IKREMRNDKRAVP--KAPINENISAREVRLIGADGEQVGIVSIDEALRIADEAKLDLVEI  60

Query  61   VANAEPPVCKIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILK  120
             A+A PPVCK+MDY KHLF+ K++  +AKK Q Q+Q+KEIK RP T+ GDYQVKLR +++
Sbjct  61   SADAVPPVCKVMDYGKHLFEKKKQANEAKKNQKQIQIKEIKFRPGTEDGDYQVKLRNLVR  120

Query  121  FLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADVTEYGVVEQAPKMEGRQMGMLLGPK  180
            FL +G+K KI+LRFRGREMAHQ+LG+  L+++EAD+ EYG VEQ PKMEGRQ+ M++ PK
Sbjct  121  FLTDGDKAKISLRFRGREMAHQELGMELLKRVEADLAEYGTVEQHPKMEGRQLMMVIAPK  180

Query  181  KKK  183
            KKK
Sbjct  181  KKK  183


>A5W5E0 Translation initiation factor IF-3 [Pseudomonas putida 
(strain ATCC 700007 / DSM 6899 / BCRC 17059 / F1)]
Length=183

 Score = 229 bits (584),  Expect = 5e-81
 Identities = 111/183 (61%), Positives = 147/183 (80%), Gaps = 2/183 (1%)

Query  1    IKQPDRNQQQGAKSNRPAINDEIRSKEVRLVGADGEQKGIVSLNEALRAAEEVELDLVEI  60
            IK+  RN ++     +  IN+ I ++EVRL+GADGEQ GIVS++EALR A+E +LDLVEI
Sbjct  3    IKREMRNDKRAVP--KAPINENISAREVRLIGADGEQVGIVSIDEALRIADEAKLDLVEI  60

Query  61   VANAEPPVCKIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILK  120
             A+A PPVCK+MDY KHLF+ K++  +AKK Q Q+Q+KEIK RP T+ GDYQVKLR +++
Sbjct  61   SADAVPPVCKVMDYGKHLFEKKKQANEAKKNQKQIQIKEIKFRPGTEDGDYQVKLRNLVR  120

Query  121  FLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADVTEYGVVEQAPKMEGRQMGMLLGPK  180
            FL +G+K KI+LRFRGREMAHQ+LG+  L+++EAD+ EYG VEQ PKMEGRQ+ M++ PK
Sbjct  121  FLTDGDKAKISLRFRGREMAHQELGMELLKRVEADLAEYGTVEQHPKMEGRQLMMVIAPK  180

Query  181  KKK  183
            KKK
Sbjct  181  KKK  183


>Q9I0A0 Translation initiation factor IF-3 [Pseudomonas aeruginosa 
(strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 
/ LMG 12228 / 1C / PRS 101 / PAO1)]
Length=183

 Score = 226 bits (575),  Expect = 1e-79
 Identities = 106/168 (63%), Positives = 139/168 (83%), Gaps = 0/168 (0%)

Query  16   RPAINDEIRSKEVRLVGADGEQKGIVSLNEALRAAEEVELDLVEIVANAEPPVCKIMDYN  75
            +P IN+ I ++EVRL+GADG+Q G+VS++EA+R AEE +LDLVEI A+A PPVC+IMDY 
Sbjct  16   KPPINENISAREVRLIGADGQQVGVVSIDEAIRLAEEAKLDLVEISADAVPPVCRIMDYG  75

Query  76   KHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILKFLEEGNKVKITLRFR  135
            KHLF+ K++   AKK Q Q QVKEIK RP T+ GDYQVKLR +++FL EG+K K++LRFR
Sbjct  76   KHLFEKKKQAAVAKKNQKQAQVKEIKFRPGTEEGDYQVKLRNLVRFLSEGDKAKVSLRFR  135

Query  136  GREMAHQQLGLAQLQKIEADVTEYGVVEQAPKMEGRQMGMLLGPKKKK  183
            GREMAHQ+LG+  L+++EAD+ EYG VEQ PK+EGRQ+ M++ PKKKK
Sbjct  136  GREMAHQELGMELLKRVEADLVEYGTVEQHPKLEGRQLMMVIAPKKKK  183


>Q8RQ01 Translation initiation factor IF-3 [Azotobacter vinelandii]
Length=181

 Score = 220 bits (560),  Expect = 2e-77
 Identities = 107/179 (60%), Positives = 142/179 (79%), Gaps = 1/179 (1%)

Query  6    RNQQQGAKSNRPA-INDEIRSKEVRLVGADGEQKGIVSLNEALRAAEEVELDLVEIVANA  64
            R  +Q  K+   A IN+ I ++EVRL+G DGEQ GIVS++EALR AEE +LDLVEI A+A
Sbjct  3    REMRQDRKAQPKAPINENISAREVRLIGVDGEQIGIVSIDEALRVAEEAKLDLVEISADA  62

Query  65   EPPVCKIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILKFLEE  124
             PPVC+IMDY KHLF+ K++   AKK Q QVQ+KEIK RP T+ GDYQVKLR +++FL +
Sbjct  63   VPPVCRIMDYGKHLFEKKKQVAAAKKNQKQVQIKEIKFRPGTEEGDYQVKLRNLVRFLND  122

Query  125  GNKVKITLRFRGREMAHQQLGLAQLQKIEADVTEYGVVEQAPKMEGRQMGMLLGPKKKK  183
            G+K K++LRFRGREMAHQ+LG+  L+++E D+ E+G VEQ PK+EGRQ+ M++ PKK+K
Sbjct  123  GDKAKVSLRFRGREMAHQELGMELLKRVENDLAEFGTVEQYPKLEGRQLMMVIAPKKRK  181


>Q9X6E7 Translation initiation factor IF-3 [Pseudomonas protegens 
(strain DSM 19095 / LMG 27888 / CFBP 6595 / CHA0)]
Length=183

 Score = 220 bits (560),  Expect = 2e-77
 Identities = 108/179 (60%), Positives = 142/179 (79%), Gaps = 1/179 (1%)

Query  5    DRNQQQGAKSNRPAINDEIRSKEVRLVGADGEQKGIVSLNEALRAAEEVELDLVEIVANA  64
            D  Q + A    P IN+ I ++EVRL+GADGEQ GIVS++EALR AEE +LDLVEI A+A
Sbjct  6    DMRQDKRAAPKAP-INENISAREVRLIGADGEQIGIVSIDEALRIAEEAKLDLVEISADA  64

Query  65   EPPVCKIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILKFLEE  124
             PPVC++MDY K +F+ K++   AKK Q Q+QVKEIK RP T+ GDYQVKLR +++FL +
Sbjct  65   VPPVCRVMDYGKSIFEKKKQIAAAKKNQKQIQVKEIKFRPGTEEGDYQVKLRNLVRFLSD  124

Query  125  GNKVKITLRFRGREMAHQQLGLAQLQKIEADVTEYGVVEQAPKMEGRQMGMLLGPKKKK  183
            G++ K++LRFRGREMAHQ+LG+  L+++EAD+ EYG VEQ PKMEGRQ+ M++ PKKKK
Sbjct  125  GDRAKVSLRFRGREMAHQELGMELLKRVEADLQEYGSVEQHPKMEGRQLIMVIAPKKKK  183


>Q4KEW3 Translation initiation factor IF-3 [Pseudomonas fluorescens 
(strain ATCC BAA-477 / NRRL B-23932 / Pf-5)]
Length=183

 Score = 220 bits (560),  Expect = 2e-77
 Identities = 108/179 (60%), Positives = 142/179 (79%), Gaps = 1/179 (1%)

Query  5    DRNQQQGAKSNRPAINDEIRSKEVRLVGADGEQKGIVSLNEALRAAEEVELDLVEIVANA  64
            D  Q + A    P IN+ I ++EVRL+GADGEQ GIVS++EALR AEE +LDLVEI A+A
Sbjct  6    DMRQDKRAAPKAP-INENISAREVRLIGADGEQIGIVSIDEALRIAEEAKLDLVEISADA  64

Query  65   EPPVCKIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILKFLEE  124
             PPVC++MDY K +F+ K++   AKK Q Q+QVKEIK RP T+ GDYQVKLR +++FL +
Sbjct  65   VPPVCRVMDYGKSIFEKKKQIAAAKKNQKQIQVKEIKFRPGTEEGDYQVKLRNLVRFLSD  124

Query  125  GNKVKITLRFRGREMAHQQLGLAQLQKIEADVTEYGVVEQAPKMEGRQMGMLLGPKKKK  183
            G++ K++LRFRGREMAHQ+LG+  L+++EAD+ EYG VEQ PKMEGRQ+ M++ PKKKK
Sbjct  125  GDRAKVSLRFRGREMAHQELGMELLKRVEADLQEYGSVEQHPKMEGRQLIMVIAPKKKK  183


>C3JZN6 Translation initiation factor IF-3 [Pseudomonas fluorescens 
(strain SBW25)]
Length=183

 Score = 218 bits (556),  Expect = 8e-77
 Identities = 108/183 (59%), Positives = 145/183 (79%), Gaps = 2/183 (1%)

Query  1    IKQPDRNQQQGAKSNRPAINDEIRSKEVRLVGADGEQKGIVSLNEALRAAEEVELDLVEI  60
            IK+  R  ++ A   +  IN+ I ++EVRL+GADGEQ GIVS++EALR AEE +LDLVEI
Sbjct  3    IKREMRQDKRAAP--KAPINENISAREVRLIGADGEQIGIVSIDEALRIAEESKLDLVEI  60

Query  61   VANAEPPVCKIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILK  120
             A+A PPVC++MDY K +F+ K++   AKK Q Q+QVKEIK RP T+ GDYQVKLR +++
Sbjct  61   SADAIPPVCRVMDYGKSIFEKKKQVAAAKKNQKQIQVKEIKFRPGTEEGDYQVKLRNLVR  120

Query  121  FLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADVTEYGVVEQAPKMEGRQMGMLLGPK  180
            FL +G++ K++LRFRGREMAHQ+LG+  L+++EAD+ EYG VEQ PKMEGRQ+ M++ PK
Sbjct  121  FLSDGDRAKVSLRFRGREMAHQELGMELLKRVEADLLEYGSVEQHPKMEGRQLIMVIAPK  180

Query  181  KKK  183
            KKK
Sbjct  181  KKK  183


>P0A132 Translation initiation factor IF-3 [Pseudomonas syringae 
pv. tomato (strain ATCC BAA-871 / DC3000)]
Length=183

 Score = 218 bits (555),  Expect = 1e-76
 Identities = 107/183 (58%), Positives = 144/183 (79%), Gaps = 2/183 (1%)

Query  1    IKQPDRNQQQGAKSNRPAINDEIRSKEVRLVGADGEQKGIVSLNEALRAAEEVELDLVEI  60
            IK+  R  ++ A   +  IN+ I ++EVRL+GADGEQ GIVS++EALR AEE +LDLVEI
Sbjct  3    IKREMRQDKRAAP--KAPINENISAREVRLIGADGEQIGIVSIDEALRIAEEAKLDLVEI  60

Query  61   VANAEPPVCKIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILK  120
             A+A PPVC++MDY K +F+ K++   AKK Q Q+QVKEIK RP T+ GDYQVKLR +++
Sbjct  61   SADAVPPVCRVMDYGKSIFEKKKQVAAAKKNQKQIQVKEIKFRPGTEEGDYQVKLRNLVR  120

Query  121  FLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADVTEYGVVEQAPKMEGRQMGMLLGPK  180
            FL +G++ K++LRFRGREMAHQ+LG+  L+++E D+ EYG VEQ PKMEGRQ+ M++ PK
Sbjct  121  FLSDGDRAKVSLRFRGREMAHQELGMELLKRVEGDLLEYGSVEQHPKMEGRQLIMVIAPK  180

Query  181  KKK  183
            KKK
Sbjct  181  KKK  183


>P0A133 Translation initiation factor IF-3 [Pseudomonas syringae 
pv. syringae]
Length=183

 Score = 218 bits (555),  Expect = 1e-76
 Identities = 107/183 (58%), Positives = 144/183 (79%), Gaps = 2/183 (1%)

Query  1    IKQPDRNQQQGAKSNRPAINDEIRSKEVRLVGADGEQKGIVSLNEALRAAEEVELDLVEI  60
            IK+  R  ++ A   +  IN+ I ++EVRL+GADGEQ GIVS++EALR AEE +LDLVEI
Sbjct  3    IKREMRQDKRAAP--KAPINENISAREVRLIGADGEQIGIVSIDEALRIAEEAKLDLVEI  60

Query  61   VANAEPPVCKIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILK  120
             A+A PPVC++MDY K +F+ K++   AKK Q Q+QVKEIK RP T+ GDYQVKLR +++
Sbjct  61   SADAVPPVCRVMDYGKSIFEKKKQVAAAKKNQKQIQVKEIKFRPGTEEGDYQVKLRNLVR  120

Query  121  FLEEGNKVKITLRFRGREMAHQQLGLAQLQKIEADVTEYGVVEQAPKMEGRQMGMLLGPK  180
            FL +G++ K++LRFRGREMAHQ+LG+  L+++E D+ EYG VEQ PKMEGRQ+ M++ PK
Sbjct  121  FLSDGDRAKVSLRFRGREMAHQELGMELLKRVEGDLLEYGSVEQHPKMEGRQLIMVIAPK  180

Query  181  KKK  183
            KKK
Sbjct  181  KKK  183


>P33321 Translation initiation factor IF-3 [Salmonella typhimurium 
(strain LT2 / SGSC1412 / ATCC 700720)]
Length=180

 Score = 213 bits (541),  Expect = 1e-74
 Identities = 110/175 (63%), Positives = 135/175 (77%), Gaps = 3/175 (2%)

Query  10   QGAKSNRPAINDEIRSKEVRLVGADGEQKGIVSLNEALRAAEEVELDLVEIVANAEPPVC  69
            Q A+ NR  IN EIR++EVRL G +GEQ GIVSL EAL  AEE  +DLVEI  NAEPPVC
Sbjct  8    QTARPNR--INSEIRAQEVRLTGLEGEQLGIVSLREALEKAEEAGVDLVEISPNAEPPVC  65

Query  70   KIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILKFLEEGNKVK  129
            +IMDY K L++  +  K+ KKKQ  +QVKEIK RP TD GDYQVKLR++++FLEEG+K K
Sbjct  66   RIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGTDEGDYQVKLRSLIRFLEEGDKAK  125

Query  130  ITLRFRGREMAHQQLGLAQLQKIEADVTEYGVVEQAP-KMEGRQMGMLLGPKKKK  183
            ITLRFRGREMAHQQ+G+  L +++ D+ E  VVE  P K+EGRQM M+L PKKK+
Sbjct  126  ITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFPTKIEGRQMIMVLAPKKKQ  180


>P0A707 Translation initiation factor IF-3 [Escherichia coli (strain 
K12)]
Length=180

 Score = 212 bits (540),  Expect = 2e-74
 Identities = 110/175 (63%), Positives = 135/175 (77%), Gaps = 3/175 (2%)

Query  10   QGAKSNRPAINDEIRSKEVRLVGADGEQKGIVSLNEALRAAEEVELDLVEIVANAEPPVC  69
            Q A+ NR  IN EIR++EVRL G +GEQ GIVSL EAL  AEE  +DLVEI  NAEPPVC
Sbjct  8    QTARPNR--INGEIRAQEVRLTGLEGEQLGIVSLREALEKAEEAGVDLVEISPNAEPPVC  65

Query  70   KIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILKFLEEGNKVK  129
            +IMDY K L++  +  K+ KKKQ  +QVKEIK RP TD GDYQVKLR++++FLEEG+K K
Sbjct  66   RIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGTDEGDYQVKLRSLIRFLEEGDKAK  125

Query  130  ITLRFRGREMAHQQLGLAQLQKIEADVTEYGVVEQAP-KMEGRQMGMLLGPKKKK  183
            ITLRFRGREMAHQQ+G+  L +++ D+ E  VVE  P K+EGRQM M+L PKKK+
Sbjct  126  ITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFPTKIEGRQMIMVLAPKKKQ  180


>O68844 Translation initiation factor IF-3 [Vibrio cholerae serotype 
O1 (strain ATCC 39315 / El Tor Inaba N16961)]
Length=183

 Score = 211 bits (538),  Expect = 5e-74
 Identities = 108/179 (60%), Positives = 133/179 (74%), Gaps = 2/179 (1%)

Query  6    RNQQQGAKSNRPAINDEIRS-KEVRLVGADGEQKGIVSLNEALRAAEEVELDLVEIVANA  64
            R  Q   K N+  +N EIR  +EVRL GADGE  GIVS+ EAL  AEE  LDLVEI  NA
Sbjct  5    RRGQVPVKQNQHRLNGEIRGVREVRLTGADGESVGIVSIQEALATAEESGLDLVEISPNA  64

Query  65   EPPVCKIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILKFLEE  124
            EPPVC++MDY K LF+  +  K+ KKKQ Q+Q+KE+K RP TDVGDYQVKLR +++FLEE
Sbjct  65   EPPVCRVMDYGKFLFEKSKATKEQKKKQKQIQIKELKFRPGTDVGDYQVKLRNLIRFLEE  124

Query  125  GNKVKITLRFRGREMAHQQLGLAQLQKIEADVTEYGVVEQAP-KMEGRQMGMLLGPKKK  182
            GNKVK+T+RFRGREMAHQ +G+  L +++ D  E+ VVE  P K+E RQM M+L PKKK
Sbjct  125  GNKVKVTIRFRGREMAHQDIGVDVLNRLKEDTDEFAVVESFPTKIEARQMIMVLAPKKK  183


>P33318 Translation initiation factor IF-3 [Klebsiella pneumoniae]
Length=180

 Score = 210 bits (535),  Expect = 1e-73
 Identities = 108/175 (62%), Positives = 135/175 (77%), Gaps = 3/175 (2%)

Query  10   QGAKSNRPAINDEIRSKEVRLVGADGEQKGIVSLNEALRAAEEVELDLVEIVANAEPPVC  69
            Q A+ NR  IN EIR++EVRL G +GEQ GIVSL EA+  AEE  +DLVEI  NAEPPVC
Sbjct  8    QTARPNR--INGEIRAQEVRLTGLEGEQLGIVSLREAIEKAEEAGVDLVEISPNAEPPVC  65

Query  70   KIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILKFLEEGNKVK  129
            +IMDY K L++  +  K+ KKKQ  +QVKEIK RP TD GDYQVKLR++++FLE+G+K K
Sbjct  66   RIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGTDEGDYQVKLRSLIRFLEDGDKAK  125

Query  130  ITLRFRGREMAHQQLGLAQLQKIEADVTEYGVVEQAP-KMEGRQMGMLLGPKKKK  183
            ITLRFRGREMAHQQ+G+  L +++ D+ E  VVE  P K+EGRQM M+L PKKK+
Sbjct  126  ITLRFRGREMAHQQIGMEVLNRVKDDLVELAVVEAFPTKIEGRQMIMVLAPKKKQ  180


>P33319 Translation initiation factor IF-3 [Proteus hauseri]
Length=179

 Score = 204 bits (519),  Expect = 3e-71
 Identities = 105/174 (60%), Positives = 128/174 (74%), Gaps = 3/174 (2%)

Query  10   QGAKSNRPAINDEIRSKEVRLVGADGEQKGIVSLNEALRAAEEVELDLVEIVANAEPPVC  69
            Q  + NR  IN EIR+ EVRL G DGEQ G+VSL EAL  AEE   DLVEI  NAEPPVC
Sbjct  8    QSTRQNR--INSEIRAHEVRLTGLDGEQIGVVSLKEALEKAEEAGADLVEISPNAEPPVC  65

Query  70   KIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILKFLEEGNKVK  129
            +IMDY K L++  +  K+ KK+Q  +QVKE+K RP TD GDYQVKLR +++FLE+G+K K
Sbjct  66   RIMDYGKFLYEKSKTLKEQKKEQKVIQVKEVKFRPGTDEGDYQVKLRNLIRFLEDGDKAK  125

Query  130  ITLRFRGREMAHQQLGLAQLQKIEADVTEYGVVEQAP-KMEGRQMGMLLGPKKK  182
            +TLRFRGREMAHQQ+G+  L +I  D+ E   VE  P K+EGRQM M+L PKKK
Sbjct  126  VTLRFRGREMAHQQIGMEVLNRIRQDLDELATVESFPNKIEGRQMIMVLAPKKK  179


>P46243 Translation initiation factor IF-3 [Buchnera aphidicola 
subsp. Schizaphis graminum (strain Sg)]
Length=179

 Score = 204 bits (518),  Expect = 4e-71
 Identities = 104/174 (60%), Positives = 135/174 (78%), Gaps = 3/174 (2%)

Query  10   QGAKSNRPAINDEIRSKEVRLVGADGEQKGIVSLNEALRAAEEVELDLVEIVANAEPPVC  69
            Q  + NR  IN+EIR+ +VRL G +G+Q GIV+L EAL  AEE+ LDLVEI  NAEPPVC
Sbjct  8    QFTRPNR--INNEIRAIKVRLTGVEGDQIGIVNLREALEKAEELGLDLVEISPNAEPPVC  65

Query  70   KIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILKFLEEGNKVK  129
            +IMDY K L++  +  K+ KKKQ  +QVKEIK RP+TD GDYQVKLR +++FLE+G+KVK
Sbjct  66   RIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPSTDEGDYQVKLRNLIRFLEDGDKVK  125

Query  130  ITLRFRGREMAHQQLGLAQLQKIEADVTEYGVVEQAP-KMEGRQMGMLLGPKKK  182
            ITLRFRGREMAHQ++G+  L +++ D+ E  ++E  P K+EGRQM M+L PKKK
Sbjct  126  ITLRFRGREMAHQKIGIDVLNRVKNDLIELAIIESFPSKIEGRQMIMVLAPKKK  179


>P33320 Translation initiation factor IF-3 [Serratia marcescens]
Length=183

 Score = 200 bits (508),  Expect = 2e-69
 Identities = 108/178 (61%), Positives = 132/178 (74%), Gaps = 6/178 (3%)

Query  10   QGAKSNRPAINDEIRSKEVRLVGADGEQKGIVSLNEALRAAEEVELDLVEIVANAEPPVC  69
            Q A+ NR  IN EIR++EVRL G DGEQ GIVSLNEAL  AEE  +DLVEI  NAEPPVC
Sbjct  8    QPARPNR--INREIRAQEVRLTGVDGEQIGIVSLNEALEKAEEAGVDLVEISPNAEPPVC  65

Query  70   KIMDYNKHLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILKFLEEGNKVK  129
            +IMDY K L++  +  K+ K++Q  +QVKEIK RP TD GDYQVKLR +++FLE+G+K K
Sbjct  66   RIMDYGKFLYEKSKSTKEQKEEQKVIQVKEIKFRPGTDDGDYQVKLRNLIRFLEDGDKAK  125

Query  130  ITLRFRGREMAHQQLGLAQLQKIEADVTE---YGVVEQAP-KMEGRQMGMLLGPKKKK  183
            ITLRFRG EMAHQQ+G+  L  +  D+ E     VVE  P K+EGRQM M+L PKKK+
Sbjct  126  ITLRFRGPEMAHQQIGMEVLNPLRKDLCEDMDLAVVESFPTKIEGRQMIMVLAPKKKQ  183


>O33567 Translation initiation factor IF-3 [Cereibacter sphaeroides 
(strain ATCC 17023 / DSM 158 / JCM 6121 / CCUG 31486 / 
LMG 2827 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.)]
Length=181

 Score = 196 bits (499),  Expect = 4e-68
 Identities = 95/166 (57%), Positives = 127/166 (77%), Gaps = 2/166 (1%)

Query  17   PAINDEIRSKEVRLVGADGEQKGIVSLNEALRAAEEVELDLVEIVANAEPPVCKIMDYNK  76
            P +N+ IR  EVRL+GA+GE  G+V+ + A+  AEE  LDLVEI  NAEPPVCKIMD+ K
Sbjct  16   PRVNERIRCPEVRLIGANGENIGVVTPSRAMMMAEEAGLDLVEISPNAEPPVCKIMDFGK  75

Query  77   HLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILKFLEEGNKVKITLRFRG  136
              ++ ++++ +A+KKQH +++KEIK RP TD  DY VK+R++LKFL EG+KVK+TLRFRG
Sbjct  76   FKYEQQKREAEARKKQHIIEIKEIKFRPGTDTHDYDVKMRSVLKFLSEGDKVKVTLRFRG  135

Query  137  REMAHQQLGLAQLQKIEADVT--EYGVVEQAPKMEGRQMGMLLGPK  180
            REMAHQ+LGL  L ++ A V+  E G VE  PK+EGRQM M++ PK
Sbjct  136  REMAHQELGLELLNRVAAHVSEAEAGKVEAMPKLEGRQMVMMIAPK  181


>Q70YI5 Translation initiation factor IF-3 [Thermus thermophilus]
Length=171

 Score = 164 bits (414),  Expect = 2e-55
 Identities = 81/162 (50%), Positives = 114/162 (70%), Gaps = 0/162 (0%)

Query  20   NDEIRSKEVRLVGADGEQKGIVSLNEALRAAEEVELDLVEIVANAEPPVCKIMDYNKHLF  79
            N+ IR+K+VR+VG DG+Q GI+   EALR A+E++LDLV +  NA+PPV +IMDY+K  +
Sbjct  7    NERIRAKQVRVVGPDGKQLGIMDTREALRLAQEMDLDLVLVGPNADPPVARIMDYSKWRY  66

Query  80   DLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILKFLEEGNKVKITLRFRGREM  139
            + +  +K+A+KK  + +VK IK R   D  DYQ KL  I +FL+EG+KVK+T+ FRGRE+
Sbjct  67   EQQMAEKEARKKAKRTEVKSIKFRVKIDEHDYQTKLGHIKRFLQEGHKVKVTIMFRGREV  126

Query  140  AHQQLGLAQLQKIEADVTEYGVVEQAPKMEGRQMGMLLGPKK  181
            AH +LG   L ++  D+ +  VVE  P+M GR M MLL P K
Sbjct  127  AHPELGERILNRVTEDLKDLAVVEMKPEMLGRDMNMLLAPVK  168



Lambda      K        H        a         alpha
   0.317    0.135    0.368    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 489456


  Database: 66620a85dde11aadcc50470088d0017a.SwissProt.fasta
    Posted date:  May 29, 2024  11:50 PM
  Number of letters in database: 4,359
  Number of sequences in database:  24



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40