BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 2b4fbde73555ac5327f6b8d96f9aada9.SwissProt.fasta
13 sequences; 5,507 total letters
Query= ACIAD3057
Length=178
Score E
Sequences producing significant alignments: (Bits) Value
Q4KI98 UPF0307 protein PFL_0904 [Pseudomonas fluorescens (strain ... 90.9 9e-27
C1DQ47 UPF0307 protein Avin_12730 [Azotobacter vinelandii (strain... 85.5 1e-24
Q87LD5 UPF0307 protein VP2677 [Vibrio parahaemolyticus serotype O... 83.6 6e-24
Q0AI71 UPF0307 protein Neut_0689 [Nitrosomonas eutropha (strain D... 83.2 9e-24
Q3KI17 UPF0307 protein Pfl01_0846 [Pseudomonas fluorescens (strai... 82.4 2e-23
A7MSA8 UPF0307 protein VIBHAR_03672 [Vibrio campbellii (strain AT... 82.0 2e-23
Q82SV5 UPF0307 protein NE2194 [Nitrosomonas europaea (strain ATCC... 81.3 5e-23
Q87WS9 UPF0307 protein PSPTO_4464 [Pseudomonas syringae pv. tomat... 80.9 6e-23
A4XQL6 UPF0307 protein Pmen_0864 [Pseudomonas mendocina (strain y... 80.1 1e-22
B7VKW1 UPF0307 protein VS_2764 [Vibrio atlanticus (strain LGP32)] 80.1 1e-22
P0A8X0 UPF0307 protein YjgA [Escherichia coli (strain K12)] 65.5 5e-17
Q8MSS1 Protein lava lamp [Drosophila melanogaster] 43.5 1e-08
Q3UIW5 E3 ubiquitin-protein ligase RNF10 [Mus musculus] 35.4 6e-06
>Q4KI98 UPF0307 protein PFL_0904 [Pseudomonas fluorescens (strain
ATCC BAA-477 / NRRL B-23932 / Pf-5)]
Length=173
Score = 90.9 bits (224), Expect = 9e-27
Identities = 53/163 (33%), Positives = 89/163 (55%), Gaps = 9/163 (6%)
Query 14 DSLEGRASKTEQKKAVQRMAALGEQLAQLSPKQIQKLPVDERLIDALLDAQTITSFEAKR 73
DSL+G SK++ K+ + + LGE+L L P + KLP+ + L AL DA + A++
Sbjct 7 DSLDGEKSKSQVKRELHALVDLGERLTTLKPDLLNKLPLTDALRRALADAPKHVAHIARK 66
Query 74 RQFQRVGKLLRNEDETVILSYLTPQQGAKKQ-----AQLQRWVDRMIEQGDPAISEFNKL 128
R Q +GKL+R++D IL L + +Q L+RW DR+I GD + +F
Sbjct 67 RHLQFIGKLMRDQDTDAILQLLDQLDASTRQYNERFHNLERWRDRLIGGGDDVLEKFVGE 126
Query 129 HNASERHTLRQHVLRIQRDITQGLAEDELTASKQKFFNYVQQV 171
+ ++R LR + + Q + LA ++ AS +K F Y++++
Sbjct 127 YPDADRQQLRSLIRQAQHE----LAHNKAPASSRKIFKYIREL 165
>C1DQ47 UPF0307 protein Avin_12730 [Azotobacter vinelandii (strain
DJ / ATCC BAA-1303)]
Length=172
Score = 85.5 bits (210), Expect = 1e-24
Identities = 51/161 (32%), Positives = 87/161 (54%), Gaps = 9/161 (6%)
Query 16 LEGRASKTEQKKAVQRMAALGEQLAQLSPKQIQKLPVDERLIDALLDAQTITSFEAKRRQ 75
L SK++ K+ + + LGE+LA L P+Q+ +LP+ + L ALLDA T+ A++R
Sbjct 8 LSEEKSKSQVKRELHALQELGERLAGLRPEQLDRLPLTDALRRALLDAPKHTAHIARKRH 67
Query 76 FQRVGKLLRNEDETVILSYLTPQQGAKKQAQ-----LQRWVDRMIEQGDPAISEFNKLHN 130
Q +GKL+R++D IL+ + +Q L+RW DR+++ GD A+ F
Sbjct 68 IQYIGKLMRDQDIDAILALFEQLDASSRQYNERFHALERWRDRLLDGGDEALEAF----V 123
Query 131 ASERHTLRQHVLRIQRDITQGLAEDELTASKQKFFNYVQQV 171
T RQH+ + R A+++ A+ +K F Y++ +
Sbjct 124 GDYPDTDRQHLRGLIRQARHETAQNKPPAASRKIFKYIRDL 164
>Q87LD5 UPF0307 protein VP2677 [Vibrio parahaemolyticus serotype
O3:K6 (strain RIMD 2210633)]
Length=175
Score = 83.6 bits (205), Expect = 6e-24
Identities = 48/124 (39%), Positives = 75/124 (60%), Gaps = 6/124 (5%)
Query 21 SKTEQKKAVQRMAALGEQLAQLSPKQIQKLPVDERLIDALLDAQTITSFEAKRRQFQRVG 80
SK+E K+ ++ + LGE+L L P ++K P+ E L +A+ DAQ + EA+RRQ QR+G
Sbjct 20 SKSEMKRDMEELQKLGEELVGLKPAVLEKFPLSEDLREAIADAQRFKN-EARRRQLQRIG 78
Query 81 KLLRNEDETVILSYLTPQQGAKKQA-----QLQRWVDRMIEQGDPAISEFNKLHNASERH 135
KL+R ED I + L + QA +L+ DR++E+GD AI + +L+ ++R
Sbjct 79 KLMRYEDPEPIQAALDKVRNKHSQATAALHKLEMLRDRVVEEGDKAIDDVMELYPEADRQ 138
Query 136 TLRQ 139
LRQ
Sbjct 139 RLRQ 142
>Q0AI71 UPF0307 protein Neut_0689 [Nitrosomonas eutropha (strain
DSM 101675 / C91 / Nm57)]
Length=176
Score = 83.2 bits (204), Expect = 9e-24
Identities = 52/146 (36%), Positives = 85/146 (58%), Gaps = 7/146 (5%)
Query 8 YNEDDFDS-LEGRASKTEQKKAVQRMAALGEQLAQLSPKQIQKLPVDERLIDALLDAQTI 66
+ +D DS LE R SKT K+ + + LGE+L +L P +I +L + E+L DALL+A+ I
Sbjct 6 HQQDISDSDLESRPSKTRLKQEMHALQVLGERLVELEPARITELDLPEKLTDALLEARRI 65
Query 67 TSFEAKRRQFQRVGKLLRNEDETVILSYLTPQQGAKKQ-----AQLQRWVDRMIEQGDPA 121
TS A+RRQ Q +GKL+R D + L Q + + QL+RW DR+I + A
Sbjct 66 TSHGARRRQMQFIGKLMRAIDPVPVQEKLDAWQHSSLKHTAWLHQLERWRDRLISD-EAA 124
Query 122 ISEFNKLHNASERHTLRQHVLRIQRD 147
++EF + + ++ LR + ++++
Sbjct 125 VTEFVQSYPQTDVRQLRTLLRNVEKE 150
>Q3KI17 UPF0307 protein Pfl01_0846 [Pseudomonas fluorescens (strain
Pf0-1)]
Length=174
Score = 82.4 bits (202), Expect = 2e-23
Identities = 52/164 (32%), Positives = 90/164 (55%), Gaps = 10/164 (6%)
Query 14 DSLE-GRASKTEQKKAVQRMAALGEQLAQLSPKQIQKLPVDERLIDALLDAQTITSFEAK 72
DSL+ G SK++ K+ + + LGE+L L P KLP+ + L AL DA T+ A+
Sbjct 7 DSLDTGEKSKSQVKRELHALVDLGERLTTLKPDLQAKLPLTDALRRALADAPKHTANIAR 66
Query 73 RRQFQRVGKLLRNEDETVILSYLTPQQGAKKQ-----AQLQRWVDRMIEQGDPAISEFNK 127
+R Q +GKL+R++D IL+ L + +Q L+RW DR+I D + +F
Sbjct 67 KRHLQFIGKLMRDQDTDAILTLLDQLDASTRQYNERFHNLERWRDRLIAGDDAVLEKFVV 126
Query 128 LHNASERHTLRQHVLRIQRDITQGLAEDELTASKQKFFNYVQQV 171
+ ++R LR + + Q ++ A+++ AS +K F Y++++
Sbjct 127 DYPDADRQQLRSLIRQAQHEV----AQNKPPASSRKIFKYIREL 166
>A7MSA8 UPF0307 protein VIBHAR_03672 [Vibrio campbellii (strain
ATCC BAA-1116)]
Length=174
Score = 82.0 bits (201), Expect = 2e-23
Identities = 48/124 (39%), Positives = 74/124 (60%), Gaps = 6/124 (5%)
Query 21 SKTEQKKAVQRMAALGEQLAQLSPKQIQKLPVDERLIDALLDAQTITSFEAKRRQFQRVG 80
SK+E K+ ++ + LGE+L L P + K P+ E L +A+ DAQ + EA+RRQ QR+G
Sbjct 20 SKSEMKRDMEELQKLGEELVGLKPAVLDKFPLSEDLREAVADAQRFKN-EARRRQLQRIG 78
Query 81 KLLRNEDETVILSYLTPQQGAKKQA-----QLQRWVDRMIEQGDPAISEFNKLHNASERH 135
KL+R ED I + L + QA +L+ DR++E+GD AI + +L+ ++R
Sbjct 79 KLMRYEDPEPIQAALDKIRNKHSQATAALHKLEALRDRVVEEGDKAIDDVMELYPEADRQ 138
Query 136 TLRQ 139
LRQ
Sbjct 139 RLRQ 142
>Q82SV5 UPF0307 protein NE2194 [Nitrosomonas europaea (strain
ATCC 19718 / CIP 103999 / KCTC 2705 / NBRC 14298)]
Length=178
Score = 81.3 bits (199), Expect = 5e-23
Identities = 55/156 (35%), Positives = 89/156 (57%), Gaps = 7/156 (4%)
Query 1 VARRTQRYNEDDFDSLEGRASKTEQKKAVQRMAALGEQLAQLSPKQIQKLPVDERLIDAL 60
V+ Q ++ D +S E R SKT K+ + + ALGE+L +L P +I +L + E+L +AL
Sbjct 3 VSDHPQTVSQPDPES-ESRPSKTRLKQEMHALQALGERLVELEPARIAELDLPEKLAEAL 61
Query 61 LDAQTITSFEAKRRQFQRVGKLLRNEDETVILSYLTPQQ--GAKKQA---QLQRWVDRMI 115
L+A+ ITS A+RR Q +GKL+R D + L Q G + A QL+RW DR+I
Sbjct 62 LEARKITSHGARRRHLQFIGKLMRAVDPLPVQEKLDAWQHTGMRHTAWLHQLERWRDRLI 121
Query 116 EQGDPAISEFNKLHNASERHTLRQHVLRIQRDITQG 151
+ A++EF + + ++ LR + I+++ G
Sbjct 122 SD-ETAVTEFVQTYPHTDVRQLRTLLRNIEKEKLAG 156
>Q87WS9 UPF0307 protein PSPTO_4464 [Pseudomonas syringae pv. tomato
(strain ATCC BAA-871 / DC3000)]
Length=173
Score = 80.9 bits (198), Expect = 6e-23
Identities = 49/163 (30%), Positives = 88/163 (54%), Gaps = 9/163 (6%)
Query 14 DSLEGRASKTEQKKAVQRMAALGEQLAQLSPKQIQKLPVDERLIDALLDAQTITSFEAKR 73
DSL+G SKT+ K+ + + LGE+L L + KLP+ + L AL +A T+ A++
Sbjct 7 DSLDGEKSKTQVKRELHALVDLGERLTTLKADVLAKLPLTDALRKALAEAPKHTANIARK 66
Query 74 RQFQRVGKLLRNEDETVILSYLTPQQGAKKQ-----AQLQRWVDRMIEQGDPAISEFNKL 128
R +GKL+R++D+ IL L + +Q L+RW DR+I D + +F
Sbjct 67 RHILFIGKLMRDQDQEAILVLLDQLDASTRQYNERFHNLERWRDRLIAGDDADLEKFVIE 126
Query 129 HNASERHTLRQHVLRIQRDITQGLAEDELTASKQKFFNYVQQV 171
+ ++R LR + + Q ++ A ++ A+ +K F Y++++
Sbjct 127 YPDADRQQLRSLIRQAQHEV----ARNKPPATSRKIFKYIREL 165
>A4XQL6 UPF0307 protein Pmen_0864 [Pseudomonas mendocina (strain
ymp)]
Length=172
Score = 80.1 bits (196), Expect = 1e-22
Identities = 48/166 (29%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query 11 DDFDSLEGRASKTEQKKAVQRMAALGEQLAQLSPKQIQKLPVDERLIDALLDAQTITSFE 70
D +D SK++ K+ + + LGE+L L + KLP+ + L AL +A T+
Sbjct 3 DSYDDFSLEKSKSQVKRELHALQDLGERLTTLKADLLAKLPLTDALRRALAEAPKHTANA 62
Query 71 AKRRQFQRVGKLLRNEDETVILSYLTPQQGAKKQAQ-----LQRWVDRMIEQGDPAISEF 125
A++R Q +GKL+R +D IL+ + + ++ L+RW DR+I +GD A+ F
Sbjct 63 ARKRHIQFIGKLMREQDIEAILALIDQVDSSTREYNERFHALERWRDRLIGEGDSALEGF 122
Query 126 NKLHNASERHTLRQHVLRIQRDITQGLAEDELTASKQKFFNYVQQV 171
+L+ ++ RQH+ + R A ++ A+ +K F Y++++
Sbjct 123 VELYPDAD----RQHLRGLIRHAQHEAAHNKPPAAARKVFKYIREL 164
>B7VKW1 UPF0307 protein VS_2764 [Vibrio atlanticus (strain LGP32)]
Length=174
Score = 80.1 bits (196), Expect = 1e-22
Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 10/158 (6%)
Query 21 SKTEQKKAVQRMAALGEQLAQLSPKQIQKLPVDERLIDALLDAQTITSFEAKRRQFQRVG 80
SKTE K + + LGE+L L P + K P+ E L A+ DAQ + EAKRRQ Q +G
Sbjct 20 SKTEMKTDMDALQKLGEELVDLKPSVLDKFPLSEDLAQAIKDAQRFKN-EAKRRQLQYIG 78
Query 81 KLLRNEDETVILSYLTPQQGAKKQA-----QLQRWVDRMIEQGDPAISEFNKLHNASERH 135
K++R+ D I + L + QA +L++ DR++ +GD AIS+ +++ ++R
Sbjct 79 KVMRSVDPEPIQAALDKIRNKHSQATVELHKLEQLRDRVVAEGDAAISDVMEMYPEADRQ 138
Query 136 TLRQHVLRIQRDITQGLAEDELTASKQKFFNYVQQVAL 173
LRQ + R + A ++ S ++ F ++++ L
Sbjct 139 RLRQ----LARQANKEKAANKPAKSSREIFQILKELKL 172
>P0A8X0 UPF0307 protein YjgA [Escherichia coli (strain K12)]
Length=183
Score = 65.5 bits (158), Expect = 5e-17
Identities = 50/168 (30%), Positives = 84/168 (50%), Gaps = 11/168 (7%)
Query 10 EDDFDSLEGRASKTEQKKAVQRMAALGEQLAQLSPKQIQKLPVDERLIDALLDAQTITSF 69
ED+ D + SK+E K+ + + LG ++ L + K+P+D L A+ AQ I
Sbjct 18 EDEDDEIIW-VSKSEIKRDAEELKRLGAEIVDLGKNALDKIPLDADLRAAIELAQRI-KM 75
Query 70 EAKRRQFQRVGKLLRNEDETVILSYLTPQQGAKKQA-----QLQRWVDRMIEQGDPAISE 124
E +RRQ Q +GK+LR D I L + Q +L+ DR+I+QGD AI+E
Sbjct 76 EGRRRQLQLIGKMLRQRDVEPIRQALDKLKNRHNQQVVLFHKLENLRDRLIDQGDDAIAE 135
Query 125 FNKLHNASERHTLRQHVLRIQRDITQGLAEDELTASKQKFFNYVQQVA 172
L ++R LR + R+ + ++ S ++ F Y++++A
Sbjct 136 VLNLWPDADRQQLRTLI----RNAKKEKEGNKPPKSARQIFQYLRELA 179
>Q8MSS1 Protein lava lamp [Drosophila melanogaster]
Length=2779
Score = 43.5 bits (101), Expect = 1e-08
Identities = 38/158 (24%), Positives = 74/158 (47%), Gaps = 4/158 (3%)
Query 15 SLEGRASKTEQKKAVQRMAALGEQLAQLSPKQIQKLPVDERLIDALLDAQTITSFEAKRR 74
+L + + E+++A Q + LG++ ++L ++I KL + + ++ + T+ E RR
Sbjct 1188 NLVSKELRRERQEADQEVFQLGQENSRLR-EEISKLQEEIHNLGQRVNEEP-TAVEDLRR 1245
Query 75 QFQRVGKLLRNEDETVILSYLTPQQGAKKQAQLQRWVDRMIE--QGDPAISEFNKLHNAS 132
Q + K E + L T Q ++ QLQ+ D +E + A E +L +
Sbjct 1246 QLEAKSKKFEKSKELIKLRNATIQSLQRELQQLQQDQDSEVEHVRNARAAHEQLRLEKDA 1305
Query 133 ERHTLRQHVLRIQRDITQGLAEDELTASKQKFFNYVQQ 170
E LRQ +L+++R G +D +T + + Q
Sbjct 1306 EITALRQEILKLERSRAAGEGDDTITKTSHQLLESQSQ 1343
Score = 25.4 bits (54), Expect = 0.012
Identities = 24/126 (19%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Query 16 LEGRASKTEQKKAVQRMAALGEQLAQLSPKQIQKLPVDERLIDALLDAQTITSFEAKRRQ 75
L+ + +QK+ V+R + + +Q+ KL D + L+ + + ++Q
Sbjct 1111 LQEQQELVKQKEEVEREPIVDNHRVEQLQQQVSKLNEDLK-AKIHLNLENRDALRQLKQQ 1169
Query 76 FQRVGKLLRNEDETVILSYLTPQQGAKKQAQLQRWVDRMIEQGDPAISEFNKLHNASERH 135
Q +L++ D + + L ++ +++ + + V ++ ++ E +KL E H
Sbjct 1170 IQEQEQLIQERDAELQDANLVSKELRRERQEADQEVFQLGQENSRLREEISKLQ--EEIH 1227
Query 136 TLRQHV 141
L Q V
Sbjct 1228 NLGQRV 1233
Score = 25.4 bits (54), Expect = 0.012
Identities = 24/118 (20%), Positives = 52/118 (44%), Gaps = 6/118 (5%)
Query 19 RASKTEQKKAVQRMAALGEQLAQLSPKQIQKLPVDERLIDALLDAQT---ITSFEAKRRQ 75
R S Q+ +V + EQ+AQL K+ + + + +R+ + + + QT + K ++
Sbjct 2276 RQSCQGQQLSVDMASRNDEQMAQLQEKESEIVHLKQRIEELMREDQTEKLVFEILTKNQE 2335
Query 76 FQRVG---KLLRNEDETVILSYLTPQQGAKKQAQLQRWVDRMIEQGDPAISEFNKLHN 130
Q + K L + E +S P+ + +L+ ++ ++ E L+N
Sbjct 2336 LQLLRMQVKQLEEDKEDQQVSAAPPKDDGETVEKLKSLCQQLQQEKSDMEEELRVLNN 2393
Score = 23.9 bits (50), Expect = 0.039
Identities = 39/183 (21%), Positives = 78/183 (43%), Gaps = 32/183 (17%)
Query 4 RTQRYNEDDFDSLEGRASKTEQKKAVQRMAALGEQLAQLSPKQIQKLPVDERLIDALLDA 63
+ ++ ED D A + + V+++ +L +QL Q +K ++E L +L+
Sbjct 2342 QVKQLEEDKEDQQVSAAPPKDDGETVEKLKSLCQQLQQ------EKSDMEEEL--RVLNN 2393
Query 64 QTITSFEAKRRQFQRVGKL---------LRNEDETVILSYLTPQQGAKKQAQL----QRW 110
++S E + R Q + +L LR E + L A++ L Q+W
Sbjct 2394 HVLSSLELEDRMKQTLLQLDTKNIEITELRRSLEILQSQNLGQNSAAEQIPDLSAINQQW 2453
Query 111 VDRMIEQGDPAISEFNKLH----NASERHTLRQHVLRIQRDI------TQGLAEDELTAS 160
++++EQ ++ + H A+ + L + + QR++ TQG A ++
Sbjct 2454 -EQLVEQKCGEVASIWQEHLSQREAAFKAQLEEVTQQQQRELPQSQQSTQGEATSDIMQK 2512
Query 161 KQK 163
QK
Sbjct 2513 MQK 2515
Score = 23.5 bits (49), Expect = 0.051
Identities = 36/173 (21%), Positives = 74/173 (43%), Gaps = 21/173 (12%)
Query 17 EGRASKTEQKKAVQRMAALGEQLAQLSPKQIQ----------KLPVDERLIDALLDAQTI 66
+ R+ + EQ++ ++ ++L Q +Q+Q +L + D LL+++ +
Sbjct 890 DARSLQAEQRQQIEEQVDQIKELRQTEAEQLQLVARQSAEITQLQLQSEQFDQLLNSKEM 949
Query 67 TSFEAKRRQFQRVGKLLRN-----EDETVILSYLT---PQQGAKKQAQLQRWVDRMIEQG 118
S E + Q R+ + L E E IL L QQ + ++ + ++ + +
Sbjct 950 -SHEKQLEQQTRIRRELEARAESLEGELSILQTLVAEQKQQLIESVSESEHALNLKMLEL 1008
Query 119 DPAISEFNKLHNASERHTLRQHVLRIQRDITQGLAEDELTASKQKFFNYVQQV 171
A E +L + LR+ LR+ + + ELT+S++ QQ+
Sbjct 1009 QSAQEELRELRAKEDPDQLRE-ALRVSKSLVAQQVR-ELTSSQETVDALNQQI 1059
Score = 22.3 bits (46), Expect = 0.12
Identities = 34/160 (21%), Positives = 66/160 (41%), Gaps = 25/160 (16%)
Query 22 KTE-QKKAVQRMAALGEQLAQLSPKQIQKLPVDERLIDALLD---------------AQT 65
KTE Q KA + M L E + + + VD L +++ A+
Sbjct 1969 KTELQTKAAKLMKRLKEYKTKATTTATPTVTVDNDLDSTIIEELKHQLQLQESRLSKAEE 2028
Query 66 ITSFEA--KRRQFQRVGKLLRNEDETVILSYLTPQQGAKKQA---QLQRWVDRMIEQGDP 120
I+ A K + +R+ L D + QA +LQ + ++ + G+P
Sbjct 2029 ISQQHALEKEKLAKRIDVLTAGNDRMAEMKERQDMDVQMYQARIRELQEKLSQLDQWGEP 2088
Query 121 AISEFNKL--HNASERHTLRQHVLRIQRDITQGLAEDELT 158
A + + L A+ +L+Q + ++++ +++ EDE T
Sbjct 2089 AATVSSSLDGDEAARIESLQQEIQQLRQQVSE--LEDERT 2126
Score = 20.8 bits (42), Expect = 0.37
Identities = 9/28 (32%), Positives = 18/28 (64%), Gaps = 0/28 (0%)
Query 22 KTEQKKAVQRMAALGEQLAQLSPKQIQK 49
+TE K+ ++++ L QLA+ +Q Q+
Sbjct 1702 ETENKRLAEQLSELQAQLARQQHQQQQQ 1729
Score = 19.6 bits (39), Expect = 0.87
Identities = 15/38 (39%), Positives = 22/38 (58%), Gaps = 4/38 (11%)
Query 24 EQKKAVQRMAALGEQLAQLSPKQIQKLPVDERLIDALL 61
EQK A MAA E+LA+ ++ L V+ RL++ L
Sbjct 428 EQKSA---MAAQNEELAE-KTTELNVLNVNLRLLEEKL 461
Score = 17.7 bits (34), Expect = 3.6
Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 0/56 (0%)
Query 32 MAALGEQLAQLSPKQIQKLPVDERLIDALLDAQTITSFEAKRRQFQRVGKLLRNED 87
+ A E+L Q Q + DE + L + + + + Q Q+ +NE+
Sbjct 384 LQATNEELRQQVAAQAKLQVTDEIVSQRLEELEATIAAQLLELQEQKSAMAAQNEE 439
Score = 17.7 bits (34), Expect = 3.6
Identities = 22/93 (24%), Positives = 33/93 (35%), Gaps = 18/93 (19%)
Query 83 LRNEDETVILSYLTPQQGAKKQAQLQRWVDRMIEQGDPAISEFNKL------------HN 130
LR D+T + + QG + A++ IEQ D E +L +
Sbjct 2215 LRARDQTELEALRQSSQGHDEAARI------AIEQRDNQQLELQQLRQQLIELEALRARD 2268
Query 131 ASERHTLRQHVLRIQRDITQGLAEDELTASKQK 163
+E LRQ Q + DE A Q+
Sbjct 2269 QAELEALRQSCQGQQLSVDMASRNDEQMAQLQE 2301
Score = 16.9 bits (32), Expect = 6.3
Identities = 14/42 (33%), Positives = 20/42 (48%), Gaps = 4/42 (10%)
Query 108 QRWVDRMIEQGDPAISEFNKLHNASERHTLRQHV--LRIQRD 147
Q V + E+ EF ++ ER TL + V LR+Q D
Sbjct 1597 QELVAQRTEELQRLNEEFQEVER--ERSTLSREVTLLRLQHD 1636
Score = 16.5 bits (31), Expect = 8.3
Identities = 6/17 (35%), Positives = 11/17 (65%), Gaps = 0/17 (0%)
Query 129 HNASERHTLRQHVLRIQ 145
H+++E+ L LR+Q
Sbjct 1635 HDSAEQDVLELQELRMQ 1651
>Q3UIW5 E3 ubiquitin-protein ligase RNF10 [Mus musculus]
Length=804
Score = 35.4 bits (80), Expect = 6e-06
Identities = 23/88 (26%), Positives = 43/88 (49%), Gaps = 2/88 (2%)
Query 88 ETVILSYLTPQQGAKKQAQLQRWV--DRMIEQGDPAISEFNKLHNASERHTLRQHVLRIQ 145
+T+ + + ++G +WV D I GD +S+++KL AS+ L + VL +
Sbjct 290 DTITMQLMKREKGVLVALPKSKWVNVDHPINLGDEQLSQYSKLLLASKEQVLHRVVLEEK 349
Query 146 RDITQGLAEDELTASKQKFFNYVQQVAL 173
+ Q LAE++ T +Q+V +
Sbjct 350 GALEQQLAEEKHTPESCFIEAAIQEVKI 377
Score = 17.7 bits (34), Expect = 3.5
Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 0/30 (0%)
Query 75 QFQRVGKLLRNEDETVILSYLTPQQGAKKQ 104
Q + KLL E V+ + ++GA +Q
Sbjct 325 QLSQYSKLLLASKEQVLHRVVLEEKGALEQ 354
Lambda K H a alpha
0.320 0.132 0.360 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 674696
Database: 2b4fbde73555ac5327f6b8d96f9aada9.SwissProt.fasta
Posted date: May 19, 2024 7:43 PM
Number of letters in database: 5,507
Number of sequences in database: 13
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40