BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 569e7975b05797fb1b4fe493b900a383.SwissProt.fasta
23 sequences; 10,123 total letters
Query= ACIAD3063
Length=486
Score E
Sequences producing significant alignments: (Bits) Value
P44439 Poly(A) polymerase I [Haemophilus influenzae (strain ATCC ... 300 2e-100
Q8ZRQ8 Poly(A) polymerase I [Salmonella typhimurium (strain LT2 /... 290 5e-96
Q8Z9C3 Poly(A) polymerase I [Salmonella typhi] 289 6e-96
P0ABF2 Poly(A) polymerase I [Escherichia coli O6:H1 (strain CFT07... 288 2e-95
P0ABF3 Poly(A) polymerase I [Escherichia coli O157:H7] 288 2e-95
P0ABF1 Poly(A) polymerase I [Escherichia coli (strain K12)] 288 2e-95
Q03S97 CCA-adding enzyme [Levilactobacillus brevis (strain ATCC 3... 119 1e-32
A4VUK6 CCA-adding enzyme [Streptococcus suis (strain 05ZYH33)] 116 1e-31
A4W0U8 CCA-adding enzyme [Streptococcus suis (strain 98HAH33)] 116 1e-31
Q03Y57 CCA-adding enzyme [Leuconostoc mesenteroides subsp. mesent... 113 1e-30
Q02Y22 CCA-adding enzyme [Lactococcus lactis subsp. cremoris (str... 112 3e-30
A2RJT1 CCA-adding enzyme [Lactococcus lactis subsp. cremoris (str... 112 3e-30
B5E6J9 CCA-adding enzyme [Streptococcus pneumoniae serotype 19F (... 112 5e-30
A8YV39 CCA-adding enzyme [Lactobacillus helveticus (strain DPC 45... 112 5e-30
Q7SIB1 CCA-adding enzyme [Geobacillus stearothermophilus] 103 3e-27
Q9KC89 CC-adding tRNA nucleotidyltransferase [Halalkalibacterium ... 101 1e-26
P42977 CCA-adding enzyme [Bacillus subtilis (strain 168)] 100 6e-26
Q96Q11 CCA tRNA nucleotidyltransferase 1, mitochondrial [Homo sap... 98.6 3e-25
Q5WGA1 CC-adding tRNA nucleotidyltransferase [Shouchella clausii ... 94.7 3e-24
Q8K1J6 CCA tRNA nucleotidyltransferase 1, mitochondrial [Mus musc... 91.3 8e-23
P06961 CCA-adding enzyme / 2'-nucleotidase / 2',3'-cyclic phospho... 81.3 1e-19
O66728 A-adding tRNA nucleotidyltransferase [Aquifex aeolicus (st... 80.5 5e-19
Q9Y7U9 tRNA nucleotidyltransferase cca2 [Schizosaccharomyces pomb... 75.1 2e-17
>P44439 Poly(A) polymerase I [Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd)]
Length=452
Score = 300 bits (769), Expect = 2e-100
Identities = 167/421 (40%), Positives = 245/421 (58%), Gaps = 18/421 (4%)
Query 4 LRASKCGLSTTQLPASILDVIDSLNKAGYEAYIVGGGVRDLMLGLNPKDFDAVTNATPAQ 63
++A++ +S + L+V++ L + G+EAYIVGG +RDL+LG PKDFD TNA P Q
Sbjct 20 IKAAQFDISPRDFSRNALNVVEKLQRQGFEAYIVGGCIRDLLLGKKPKDFDVATNARPEQ 79
Query 64 VKEVFGRRCRIIGRRFELAHVYSGRELIEVATFRA------PPKKAVTSASGMILRDNNW 117
++ +F R+CR++GRRF LAH+ GR++IEVATFRA +A S GM+LRDN +
Sbjct 80 IQNIFQRQCRLVGRRFRLAHIMFGRDIIEVATFRANHSDARNENQAKQSNEGMLLRDNVY 139
Query 118 GTIEQDFARRDFSINTLYYQPRKGIVLDFCDAVSDVKKRTLRLLGDPAQRFEEDPVRMLR 177
GTIEQD ARRDF++N LYY P+ + D+ + + D+K LRL+GDP R++EDPVRMLR
Sbjct 140 GTIEQDAARRDFTVNALYYNPQDNTLRDYFEGIKDLKAGKLRLIGDPVTRYQEDPVRMLR 199
Query 178 ALRFAAKLNFDID-PEILKIFDVEMTQLLRDVSPHRLYDESQKLFTMGHLSRVLPMLIEF 236
++RF AKL+ ++ P I E+ LL+++ P RL+DES KL G + +L ++
Sbjct 200 SIRFMAKLDMFLEKPSEQPI--RELAPLLKNIPPARLFDESLKLLQAGQGVKTYRLLRQY 257
Query 237 DIWRQLFADVKAEIT----PFIER----AAKNTDQRIQIGKTINPAFFYAVLLWRSFLER 288
++ QLF + A T F ER A +TD+R+ INPAF +A W E+
Sbjct 258 GLFEQLFPALSAYFTEKEDSFAERMIVTALTSTDERVADKLRINPAFLFAAFFWYPLREK 317
Query 289 SDFYLQK-GIVPAEARAQAGLDVLKRQATRTVIPRFAETFIREVWEMQTRLLNPKPQQIE 347
+ + G+ +A A AG +VL PR IR++W +Q +LL
Sbjct 318 VEILKNEGGLNNHDAYALAGNEVLDLFCRALAAPRRHTAVIRDIWFLQLQLLKRTGSAPM 377
Query 348 ALAGHARFRAGFDFLLLREKSGDSSTQGMGEWWEHYQSLNADQKEVVISQYNRQRAKTRR 407
H +FRAGFD L +R + T + +WW YQ N +Q+E +I + R K ++
Sbjct 378 RTMEHPKFRAGFDLLAMRAEIEGGETIELAKWWHEYQFSNGEQREQLIQEQQRLHPKPKK 437
Query 408 K 408
K
Sbjct 438 K 438
>Q8ZRQ8 Poly(A) polymerase I [Salmonella typhimurium (strain LT2
/ SGSC1412 / ATCC 700720)]
Length=465
Score = 290 bits (741), Expect = 5e-96
Identities = 164/415 (40%), Positives = 242/415 (58%), Gaps = 19/415 (5%)
Query 11 LSTTQLPASILDVIDSLNKAGYEAYIVGGGVRDLMLGLNPKDFDAVTNATPAQVKEVFGR 70
+S + + L V+ LNKAGYEAY+VGGGVRDL+LG PKDFD TNATP QV+++F R
Sbjct 39 ISRKDISENALKVLYRLNKAGYEAYLVGGGVRDLLLGKKPKDFDVTTNATPDQVRKLF-R 97
Query 71 RCRIIGRRFELAHVYSGRELIEVATFRAPPKKAVTSAS-------GMILRDNNWGTIEQD 123
CR++GRRF LAHV G E+IEVATFR + + + + GM+LRDN +G+IE+D
Sbjct 98 NCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGSESDRTTSQRGQNGMLLRDNIFGSIEED 157
Query 124 FARRDFSINTLYYQPRKGIVLDFCDAVSDVKKRTLRLLGDPAQRFEEDPVRMLRALRFAA 183
RRDF+IN+LYY V D+ + D+++ +RL+G+P R+ EDPVRMLRA+RFAA
Sbjct 158 AQRRDFTINSLYYSVADFTVRDYVGGMQDLQEGVIRLIGNPETRYREDPVRMLRAVRFAA 217
Query 184 KLNFDIDPEILKIFDVEMTQLLRDVSPHRLYDESQKLFTMGHLSRVLPMLIEFDIWRQLF 243
KLN I PE + + LL D+ P RL++ES KL G+ L E+ +++ LF
Sbjct 218 KLNMHISPETAEPIP-RLATLLNDIPPARLFEESLKLLQAGNGYETYQQLREYHLFQPLF 276
Query 244 ADVKAEITP--------FIERAAKNTDQRIQIGKTINPAFFYAVLLWRSFLERSDFYLQK 295
+ T I + KNTD RI+ +NPAF +A + W LE + Q+
Sbjct 277 PTITRYFTENGDSAMERIIAQVLKNTDNRIRNEMRVNPAFLFAAMFWYPLLEMAQKIAQE 336
Query 296 -GIVPAEARAQAGLDVLKRQATRTVIPRFAETFIREVWEMQTRLLNPKPQQIEALAGHAR 354
G+ +A A A DVL IP+ T R++W++Q R+ + ++ L H +
Sbjct 337 SGLAYYDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQLRMSRRQGKRAWKLMEHPK 396
Query 355 FRAGFDFLLLR-EKSGDSSTQGMGEWWEHYQSLNADQKEVVISQYNRQRAKTRRK 408
FRA FD L LR + ++ Q + +WW +Q+ +++ ++++ + A RR+
Sbjct 397 FRAAFDLLELRAQVENNTELQRLAQWWAEFQASAPPEQKGMLNELDDDPAPRRRR 451
>Q8Z9C3 Poly(A) polymerase I [Salmonella typhi]
Length=465
Score = 289 bits (740), Expect = 6e-96
Identities = 164/415 (40%), Positives = 242/415 (58%), Gaps = 19/415 (5%)
Query 11 LSTTQLPASILDVIDSLNKAGYEAYIVGGGVRDLMLGLNPKDFDAVTNATPAQVKEVFGR 70
+S + + L V+ LNKAGYEAY+VGGGVRDL+LG PKDFD TNATP QV+++F R
Sbjct 39 ISRKDISENALKVLYRLNKAGYEAYLVGGGVRDLLLGKKPKDFDVTTNATPDQVRKLF-R 97
Query 71 RCRIIGRRFELAHVYSGRELIEVATFRAPPKKAVTSAS-------GMILRDNNWGTIEQD 123
CR++GRRF LAHV G E+IEVATFR + + + + GM+LRDN +G+IE+D
Sbjct 98 NCRLVGRRFRLAHVMFGPEIIEVATFRGHNEGSESDRTTSQRGQNGMLLRDNIFGSIEED 157
Query 124 FARRDFSINTLYYQPRKGIVLDFCDAVSDVKKRTLRLLGDPAQRFEEDPVRMLRALRFAA 183
RRDF+IN+LYY V D+ + D+++ +RL+G+P R+ EDPVRMLRA+RFAA
Sbjct 158 AQRRDFTINSLYYSVADFTVRDYVGGMQDLQEGVIRLIGNPETRYREDPVRMLRAVRFAA 217
Query 184 KLNFDIDPEILKIFDVEMTQLLRDVSPHRLYDESQKLFTMGHLSRVLPMLIEFDIWRQLF 243
KLN I PE + + LL D+ P RL++ES KL G+ L E+ +++ LF
Sbjct 218 KLNMRISPETAEPIP-RLATLLNDIPPARLFEESLKLLQAGNGFETYQQLREYHLFQPLF 276
Query 244 ADVKAEITP--------FIERAAKNTDQRIQIGKTINPAFFYAVLLWRSFLERSDFYLQK 295
+ T I + KNTD RI+ +NPAF +A + W LE + Q+
Sbjct 277 PTITRYFTENGDSAMERIIAQVLKNTDNRIRNEMRVNPAFLFAAMFWYPLLEMAQKIAQE 336
Query 296 -GIVPAEARAQAGLDVLKRQATRTVIPRFAETFIREVWEMQTRLLNPKPQQIEALAGHAR 354
G+ +A A A DVL IP+ T R++W++Q R+ + ++ L H +
Sbjct 337 SGLAYYDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQLRMSRRQGKRAWKLMEHPK 396
Query 355 FRAGFDFLLLR-EKSGDSSTQGMGEWWEHYQSLNADQKEVVISQYNRQRAKTRRK 408
FRA FD L LR + ++ Q + +WW +Q+ +++ ++++ + A RR+
Sbjct 397 FRAAFDLLELRAQVENNTELQRLAQWWAEFQASAPPEQKGMLNELDDDPAPRRRR 451
>P0ABF2 Poly(A) polymerase I [Escherichia coli O6:H1 (strain CFT073
/ ATCC 700928 / UPEC)]
Length=465
Score = 288 bits (737), Expect = 2e-95
Identities = 170/417 (41%), Positives = 241/417 (58%), Gaps = 22/417 (5%)
Query 11 LSTTQLPASILDVIDSLNKAGYEAYIVGGGVRDLMLGLNPKDFDAVTNATPAQVKEVFGR 70
+S + + L V+ LNKAGYEA++VGGGVRDL+LG PKDFD TNATP QV+++F R
Sbjct 39 ISRKDISENALKVMYRLNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPEQVRKLF-R 97
Query 71 RCRIIGRRFELAHVYSGRELIEVATFRAPPKKAVTSAS-------GMILRDNNWGTIEQD 123
CR++GRRF LAHV G E+IEVATFR + V+ + GM+LRDN +G+IE+D
Sbjct 98 NCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGNVSDRTTSQRGQNGMLLRDNIFGSIEED 157
Query 124 FARRDFSINTLYYQPRKGIVLDFCDAVSDVKKRTLRLLGDPAQRFEEDPVRMLRALRFAA 183
RRDF+IN+LYY V D+ + D+K +RL+G+P R+ EDPVRMLRA+RFAA
Sbjct 158 AQRRDFTINSLYYSVADFTVRDYVGGMKDLKDGVIRLIGNPETRYREDPVRMLRAVRFAA 217
Query 184 KLNFDIDPEILKIFDVEMTQLLRDVSPHRLYDESQKLFTMGHLSRVLPMLIEFDIWRQLF 243
KL I PE + + LL D+ P RL++ES KL G+ +L E+ +++ LF
Sbjct 218 KLGMRISPETAEPIP-RLATLLNDIPPARLFEESLKLLQAGYGYETYKLLCEYHLFQPLF 276
Query 244 ADVKAEITP--------FIERAAKNTDQRIQIGKTINPAFFYAVLLWRSFLERSDFYLQK 295
+ T IE+ KNTD RI +NPAF +A + W LE + Q+
Sbjct 277 PTITRYFTENGDSPMERIIEQVLKNTDTRIHNDMRVNPAFLFAAMFWYPLLETAQKIAQE 336
Query 296 -GIVPAEARAQAGLDVLKRQATRTVIPRFAETFIREVWEMQTRLLNPKPQQIEALAGHAR 354
G+ +A A A DVL IP+ T R++W++Q R+ + ++ L H +
Sbjct 337 SGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQLRMSRRQGKRAWKLLEHPK 396
Query 355 FRAGFDFLLLR-EKSGDSSTQGMGEWWEHYQ-SLNADQKEVV--ISQYNRQRAKTRR 407
FRA +D L LR E ++ Q + +WW +Q S DQK ++ + + R +TRR
Sbjct 397 FRAAYDLLALRAEVERNAELQRLVKWWGEFQVSAPPDQKGMLNELDEEPSPRRRTRR 453
>P0ABF3 Poly(A) polymerase I [Escherichia coli O157:H7]
Length=465
Score = 288 bits (737), Expect = 2e-95
Identities = 170/417 (41%), Positives = 241/417 (58%), Gaps = 22/417 (5%)
Query 11 LSTTQLPASILDVIDSLNKAGYEAYIVGGGVRDLMLGLNPKDFDAVTNATPAQVKEVFGR 70
+S + + L V+ LNKAGYEA++VGGGVRDL+LG PKDFD TNATP QV+++F R
Sbjct 39 ISRKDISENALKVMYRLNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPEQVRKLF-R 97
Query 71 RCRIIGRRFELAHVYSGRELIEVATFRAPPKKAVTSAS-------GMILRDNNWGTIEQD 123
CR++GRRF LAHV G E+IEVATFR + V+ + GM+LRDN +G+IE+D
Sbjct 98 NCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGNVSDRTTSQRGQNGMLLRDNIFGSIEED 157
Query 124 FARRDFSINTLYYQPRKGIVLDFCDAVSDVKKRTLRLLGDPAQRFEEDPVRMLRALRFAA 183
RRDF+IN+LYY V D+ + D+K +RL+G+P R+ EDPVRMLRA+RFAA
Sbjct 158 AQRRDFTINSLYYSVADFTVRDYVGGMKDLKDGVIRLIGNPETRYREDPVRMLRAVRFAA 217
Query 184 KLNFDIDPEILKIFDVEMTQLLRDVSPHRLYDESQKLFTMGHLSRVLPMLIEFDIWRQLF 243
KL I PE + + LL D+ P RL++ES KL G+ +L E+ +++ LF
Sbjct 218 KLGMRISPETAEPIP-RLATLLNDIPPARLFEESLKLLQAGYGYETYKLLCEYHLFQPLF 276
Query 244 ADVKAEITP--------FIERAAKNTDQRIQIGKTINPAFFYAVLLWRSFLERSDFYLQK 295
+ T IE+ KNTD RI +NPAF +A + W LE + Q+
Sbjct 277 PTITRYFTENGDSPMERIIEQVLKNTDTRIHNDMRVNPAFLFAAMFWYPLLETAQKIAQE 336
Query 296 -GIVPAEARAQAGLDVLKRQATRTVIPRFAETFIREVWEMQTRLLNPKPQQIEALAGHAR 354
G+ +A A A DVL IP+ T R++W++Q R+ + ++ L H +
Sbjct 337 SGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQLRMSRRQGKRAWKLLEHPK 396
Query 355 FRAGFDFLLLR-EKSGDSSTQGMGEWWEHYQ-SLNADQKEVV--ISQYNRQRAKTRR 407
FRA +D L LR E ++ Q + +WW +Q S DQK ++ + + R +TRR
Sbjct 397 FRAAYDLLALRAEVERNAELQRLVKWWGEFQVSAPPDQKGMLNELDEEPSPRRRTRR 453
>P0ABF1 Poly(A) polymerase I [Escherichia coli (strain K12)]
Length=465
Score = 288 bits (737), Expect = 2e-95
Identities = 170/417 (41%), Positives = 241/417 (58%), Gaps = 22/417 (5%)
Query 11 LSTTQLPASILDVIDSLNKAGYEAYIVGGGVRDLMLGLNPKDFDAVTNATPAQVKEVFGR 70
+S + + L V+ LNKAGYEA++VGGGVRDL+LG PKDFD TNATP QV+++F R
Sbjct 39 ISRKDISENALKVMYRLNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPEQVRKLF-R 97
Query 71 RCRIIGRRFELAHVYSGRELIEVATFRAPPKKAVTSAS-------GMILRDNNWGTIEQD 123
CR++GRRF LAHV G E+IEVATFR + V+ + GM+LRDN +G+IE+D
Sbjct 98 NCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGNVSDRTTSQRGQNGMLLRDNIFGSIEED 157
Query 124 FARRDFSINTLYYQPRKGIVLDFCDAVSDVKKRTLRLLGDPAQRFEEDPVRMLRALRFAA 183
RRDF+IN+LYY V D+ + D+K +RL+G+P R+ EDPVRMLRA+RFAA
Sbjct 158 AQRRDFTINSLYYSVADFTVRDYVGGMKDLKDGVIRLIGNPETRYREDPVRMLRAVRFAA 217
Query 184 KLNFDIDPEILKIFDVEMTQLLRDVSPHRLYDESQKLFTMGHLSRVLPMLIEFDIWRQLF 243
KL I PE + + LL D+ P RL++ES KL G+ +L E+ +++ LF
Sbjct 218 KLGMRISPETAEPIP-RLATLLNDIPPARLFEESLKLLQAGYGYETYKLLCEYHLFQPLF 276
Query 244 ADVKAEITP--------FIERAAKNTDQRIQIGKTINPAFFYAVLLWRSFLERSDFYLQK 295
+ T IE+ KNTD RI +NPAF +A + W LE + Q+
Sbjct 277 PTITRYFTENGDSPMERIIEQVLKNTDTRIHNDMRVNPAFLFAAMFWYPLLETAQKIAQE 336
Query 296 -GIVPAEARAQAGLDVLKRQATRTVIPRFAETFIREVWEMQTRLLNPKPQQIEALAGHAR 354
G+ +A A A DVL IP+ T R++W++Q R+ + ++ L H +
Sbjct 337 SGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQLRMSRRQGKRAWKLLEHPK 396
Query 355 FRAGFDFLLLR-EKSGDSSTQGMGEWWEHYQ-SLNADQKEVV--ISQYNRQRAKTRR 407
FRA +D L LR E ++ Q + +WW +Q S DQK ++ + + R +TRR
Sbjct 397 FRAAYDLLALRAEVERNAELQRLVKWWGEFQVSAPPDQKGMLNELDEEPSPRRRTRR 453
>Q03S97 CCA-adding enzyme [Levilactobacillus brevis (strain ATCC
367 / BCRC 12310 / CIP 105137 / JCM 1170 / LMG 11437 / NCIMB
947 / NCTC 947)]
Length=397
Score = 119 bits (298), Expect = 1e-32
Identities = 80/230 (35%), Positives = 119/230 (52%), Gaps = 8/230 (3%)
Query 23 VIDSLNKAGYEAYIVGGGVRDLMLGLNPKDFDAVTNATPAQVKEVFGRRCRIIGRRFELA 82
V+ ++ +AGYEAY VGG VRD +LG D D T+A P ++K +F +R G
Sbjct 16 VLQTIEQAGYEAYFVGGSVRDTILGKEIHDVDIATSAYPDEIKHLF-KRTVDTGIEHGTV 74
Query 83 HVYSGRELIEVATFRAPPKKAVTSASGMILRDNNWGTIEQDFARRDFSINTLYYQPRKGI 142
+ E TFR+ + + + +D RRDF+IN L + G
Sbjct 75 MILDHGTGYETTTFRSESTYTDFRRPDQVTFVRS---LAEDLKRRDFTINALAMK-EDGT 130
Query 143 VLDFCDAVSDVKKRTLRLLGDPAQRFEEDPVRMLRALRFAAKLNFDIDPEILKIFDVEMT 202
V+D D ++D+K R +R +GDP +RF ED +RM+RA+RFA++LNF I PE L
Sbjct 131 VIDLFDGLADLKHRQIRAVGDPQERFHEDALRMMRAVRFASQLNFTIVPETLAAM-TSHA 189
Query 203 QLLRDVSPHRLYDESQKLFTMGHLSRVLPMLIEFDIWRQL--FADVKAEI 250
+LLR ++ R E KL T + L L+ +W+ FAD K ++
Sbjct 190 ELLRKIAVERTQVELLKLLTGQAPQQGLTDLLTTGLWQYCPDFADHKVDL 239
>A4VUK6 CCA-adding enzyme [Streptococcus suis (strain 05ZYH33)]
Length=403
Score = 116 bits (291), Expect = 1e-31
Identities = 71/215 (33%), Positives = 113/215 (53%), Gaps = 6/215 (3%)
Query 21 LDVIDSLNKAGYEAYIVGGGVRDLMLGLNPKDFDAVTNATPAQVKEVFGRRCRIIGRRFE 80
L +++ + AG+EAY VGG VRD +LG D D T++ P + K++F R + G
Sbjct 14 LPILEKIKAAGFEAYFVGGSVRDAILGRPIHDVDIATSSYPQETKQIFSRTIDV-GIEHG 72
Query 81 LAHVYSGRELIEVATFRAPPKKAVTSASGMILRDNNWGTIEQDFARRDFSINTLYYQPRK 140
V G++ E+ TFR + + + ++E+D RRDF++N
Sbjct 73 TVLVLEGKKEYEITTFRTEEEYVDFRRPSQV---SFVRSLEEDLKRRDFTVNAFALDEEA 129
Query 141 GIVLDFCDAVSDVKKRTLRLLGDPAQRFEEDPVRMLRALRFAAKLNFDIDPEILKIFDVE 200
IV D D ++D++ RTLR +G PA+RF ED +R++R RFAA L+F+I+P + V+
Sbjct 130 QIV-DLFDGMTDLENRTLRAVGIPAERFNEDALRIMRGFRFAATLDFEIEPTTFEAM-VQ 187
Query 201 MTQLLRDVSPHRLYDESQKLFTMGHLSRVLPMLIE 235
LL +S R + E KL + L +I+
Sbjct 188 TAPLLEKISVERSFIEFDKLLMADFWRKGLRAMID 222
>A4W0U8 CCA-adding enzyme [Streptococcus suis (strain 98HAH33)]
Length=403
Score = 116 bits (291), Expect = 1e-31
Identities = 71/215 (33%), Positives = 113/215 (53%), Gaps = 6/215 (3%)
Query 21 LDVIDSLNKAGYEAYIVGGGVRDLMLGLNPKDFDAVTNATPAQVKEVFGRRCRIIGRRFE 80
L +++ + AG+EAY VGG VRD +LG D D T++ P + K++F R + G
Sbjct 14 LPILEKIKAAGFEAYFVGGSVRDAILGRPIHDVDIATSSYPQETKQIFSRTIDV-GIEHG 72
Query 81 LAHVYSGRELIEVATFRAPPKKAVTSASGMILRDNNWGTIEQDFARRDFSINTLYYQPRK 140
V G++ E+ TFR + + + ++E+D RRDF++N
Sbjct 73 TVLVLEGKKEYEITTFRTEEEYVDFRRPSQV---SFVRSLEEDLKRRDFTVNAFALDEEA 129
Query 141 GIVLDFCDAVSDVKKRTLRLLGDPAQRFEEDPVRMLRALRFAAKLNFDIDPEILKIFDVE 200
IV D D ++D++ RTLR +G PA+RF ED +R++R RFAA L+F+I+P + V+
Sbjct 130 QIV-DLFDGMTDLENRTLRAVGIPAERFNEDALRIMRGFRFAATLDFEIEPTTFEAM-VQ 187
Query 201 MTQLLRDVSPHRLYDESQKLFTMGHLSRVLPMLIE 235
LL +S R + E KL + L +I+
Sbjct 188 TAPLLEKISVERSFIEFDKLLMADFWRKGLRAMID 222
>Q03Y57 CCA-adding enzyme [Leuconostoc mesenteroides subsp. mesenteroides
(strain ATCC 8293 / DSM 20343 / BCRC 11652 / CCM
1803 / JCM 6124 / NCDO 523 / NBRC 100496 / NCIMB 8023 / NCTC
12954 / NRRL B-1118 / 37Y)]
Length=401
Score = 113 bits (283), Expect = 1e-30
Identities = 81/238 (34%), Positives = 121/238 (51%), Gaps = 15/238 (6%)
Query 11 LSTTQLPASILD---VIDSLNKAGYEAYIVGGGVRDLMLGLNPKDFDAVTNATPAQVKEV 67
+ TQLP +D ++ L AG+EAY VGG VRD MLG D D ++A P +VK +
Sbjct 1 MKITQLPQEFIDAQPILTKLEDAGFEAYFVGGSVRDTMLGKTIHDVDIASSAFPEEVKSL 60
Query 68 FGRRCRIIGRRFELAHVYSGRELIEVATFRAPPKKAVTSASGMILRDNNWG---TIEQDF 124
F G + V E+ TFR V S R ++ ++E+D
Sbjct 61 FHNTVDT-GIQHGTVMVLDHGTGYEITTFR------VESTYTDFRRPDHVTFVRSLEEDL 113
Query 125 ARRDFSINTLYYQPRKGIVLDFCDAVSDVKKRTLRLLGDPAQRFEEDPVRMLRALRFAAK 184
RRDF+IN L + G VLD D + D+KK +R +GD +RF ED +RM+RALRF+A+
Sbjct 114 KRRDFTINALAMR-HDGEVLDLFDGLEDMKKGVIRAVGDAEKRFTEDALRMMRALRFSAQ 172
Query 185 LNFDIDPEILKIFDVEMTQLLRDVSPHRLYDESQKLFTMGHLSRVLPMLIEFDIWRQL 242
L F+I+ + K V++ L ++ R+ E +KL S+ L + + + L
Sbjct 173 LGFNIEADTQKAL-VDLAPNLAKIAVERVRVEFEKLLLGSQASQSLELALRDQVMNYL 229
>Q02Y22 CCA-adding enzyme [Lactococcus lactis subsp. cremoris
(strain SK11)]
Length=402
Score = 112 bits (281), Expect = 3e-30
Identities = 72/225 (32%), Positives = 120/225 (53%), Gaps = 13/225 (6%)
Query 23 VIDSLNKAGYEAYIVGGGVRDLMLGLNPKDFDAVTNATPAQVKEVFGRRCRIIGRRFELA 82
V++ +++ G+EAY VGG VRD++LG D D T+A P ++K++F + G
Sbjct 16 VLEKISEHGFEAYFVGGSVRDVLLGREIHDVDIATSAYPEEIKDIFPYTIDV-GIEHGTV 74
Query 83 HVYSGR---ELIEVATFRAPPKKAVTSASGMI--LRDNNWGTIEQDFARRDFSINTLYYQ 137
V +G+ E E+ TFR K + +RD + +D RRDF++N +
Sbjct 75 LVLAGKSEAEHYEITTFRTESKYTDYRRPDHVDFVRD-----LREDLKRRDFTVNA-FAC 128
Query 138 PRKGIVLDFCDAVSDVKKRTLRLLGDPAQRFEEDPVRMLRALRFAAKLNFDIDPEILKIF 197
+G ++D D ++D+K+R L +G +RF ED +R++RA+RFA+ L+F I+ +
Sbjct 129 DFEGQIIDLFDGLTDLKERRLTAVGSALERFNEDALRIMRAMRFASTLDFKIEEKTFSAM 188
Query 198 DVEMTQLLRDVSPHRLYDESQKLFTMGHLSRVLPMLIEFDIWRQL 242
E + LL +S R++ E KL L +LIE + W+ L
Sbjct 189 R-ERSHLLEKISVERIFIELDKLLLGSEWRNGLTLLIESEAWKYL 232
>A2RJT1 CCA-adding enzyme [Lactococcus lactis subsp. cremoris
(strain MG1363)]
Length=402
Score = 112 bits (281), Expect = 3e-30
Identities = 72/225 (32%), Positives = 120/225 (53%), Gaps = 13/225 (6%)
Query 23 VIDSLNKAGYEAYIVGGGVRDLMLGLNPKDFDAVTNATPAQVKEVFGRRCRIIGRRFELA 82
V++ +++ G+EAY VGG VRD++LG D D T+A P ++K++F + G
Sbjct 16 VLEKISEHGFEAYFVGGSVRDVLLGREIHDVDIATSAYPEEIKDIFPYTIDV-GIEHGTV 74
Query 83 HVYSGR---ELIEVATFRAPPKKAVTSASGMI--LRDNNWGTIEQDFARRDFSINTLYYQ 137
V +G+ E E+ TFR K + +RD + +D RRDF++N +
Sbjct 75 LVLAGKSEAEHYEITTFRTESKYTDYRRPDHVDFVRD-----LREDLKRRDFTVNA-FAC 128
Query 138 PRKGIVLDFCDAVSDVKKRTLRLLGDPAQRFEEDPVRMLRALRFAAKLNFDIDPEILKIF 197
+G ++D D ++D+K+R L +G +RF ED +R++RA+RFA+ L+F I+ +
Sbjct 129 DFEGQIIDLFDGLTDLKERRLTAVGSALERFNEDALRIMRAMRFASTLDFKIEEKTFSAM 188
Query 198 DVEMTQLLRDVSPHRLYDESQKLFTMGHLSRVLPMLIEFDIWRQL 242
E + LL +S R++ E KL L +LIE + W+ L
Sbjct 189 R-ERSHLLEKISVERIFIELDKLLLGSEWRNGLTLLIESEAWKYL 232
>B5E6J9 CCA-adding enzyme [Streptococcus pneumoniae serotype 19F
(strain G54)]
Length=399
Score = 112 bits (279), Expect = 5e-30
Identities = 84/284 (30%), Positives = 134/284 (47%), Gaps = 15/284 (5%)
Query 14 TQLPASI---LDVIDSLNKAGYEAYIVGGGVRDLMLGLNPKDFDAVTNATPAQVKEVFGR 70
TQ+P+ L V++ + +AG+EAY VGG VRD +L D D T++ P + K++F R
Sbjct 4 TQMPSEFQKALPVLEKIKEAGFEAYFVGGSVRDALLHNPIHDVDIATSSYPEETKQIFPR 63
Query 71 RCRIIGRRFELAHVYSGRELIEVATFRAPPKKAVTSASGMILRDNNWGTIEQDFARRDFS 130
I G V G E EV TFR + + ++E+D RRDF+
Sbjct 64 TADI-GIEHGTVLVLDGDEEYEVTTFRTEDVYVDYRRPSAV---SFVRSLEEDLKRRDFT 119
Query 131 INTLYYQPRKGIVLDFCDAVSDVKKRTLRLLGDPAQRFEEDPVRMLRALRFAAKLNFDID 190
+N + G ++D + D++K+ LR +G ++RF ED +R++R RF A L F ++
Sbjct 120 VNA-FALDETGEIVDLFHGLEDLEKQVLRAVGVASERFNEDALRIMRGFRFQASLGFALE 178
Query 191 PEILKIFDVEMTQLLRDVSPHRLYDESQKLFTMGHLSRVLPMLIEFDIWRQLFADVKAEI 250
PE K +T LL ++S R + E KL R L +IE + L D+ +
Sbjct 179 PETFKAMKT-LTPLLENISVERTFVEFDKLLLAPFWRRGLASMIESQAYDYL-PDMASSQ 236
Query 251 TPFIERAAKNTDQRIQIGKTINPAFFYAVLLWRSFLERSDFYLQ 294
TD + + +A LLW +E + +L+
Sbjct 237 DKLNRLFDLETDFTFESSEQA-----WAALLWALEIENAQSFLK 275
>A8YV39 CCA-adding enzyme [Lactobacillus helveticus (strain DPC
4571)]
Length=399
Score = 112 bits (279), Expect = 5e-30
Identities = 70/215 (33%), Positives = 114/215 (53%), Gaps = 6/215 (3%)
Query 21 LDVIDSLNKAGYEAYIVGGGVRDLMLGLNPKDFDAVTNATPAQVKEVFGRRCRIIGRRFE 80
+ V+ +L AG+EAY VGG VRDL+L + D D T+A P +VKE+F + G R
Sbjct 15 MPVLQTLEDAGFEAYFVGGSVRDLLLDRHVHDVDITTSAYPEEVKELFAKSID-TGIRHG 73
Query 81 LAHVYSGRELIEVATFRAPPKKAVTSASGMILRDNNWGTIEQDFARRDFSINTLYYQPRK 140
V G E E+ TFR + N +++D RRDF+IN L
Sbjct 74 TVTVLYGGESYEITTFRTESGYQDYRRPDHVTFVQN---LDEDLKRRDFTINAL-AMDLH 129
Query 141 GIVLDFCDAVSDVKKRTLRLLGDPAQRFEEDPVRMLRALRFAAKLNFDIDPEILKIFDVE 200
G ++D + V D+K +R +GDP +RF ED +RM+RA+RF ++L F+++ + + +
Sbjct 130 GQIVDLFNGVEDLKNHIIRAVGDPEKRFHEDALRMMRAVRFTSQLKFNLEEKTEQAIK-D 188
Query 201 MTQLLRDVSPHRLYDESQKLFTMGHLSRVLPMLIE 235
+LL+ +S R+ +E K+ H + + ++
Sbjct 189 NHELLKKISVERIREEFVKMGIGPHSRQAFQIFLD 223
>Q7SIB1 CCA-adding enzyme [Geobacillus stearothermophilus]
Length=404
Score = 103 bits (258), Expect = 3e-27
Identities = 69/217 (32%), Positives = 113/217 (52%), Gaps = 10/217 (5%)
Query 21 LDVIDSLNKAGYEAYIVGGGVRDLMLGLNPKDFDAVTNATPAQVKEVFGRRCRIIGRRFE 80
L +I L + GY+AY VGG VRDL+LG D D T+A P V +F + + +
Sbjct 9 LGIIQQLKQHGYDAYFVGGAVRDLLLGRPIGDVDIATSALPEDVMAIFPKTIDVGSKHGT 68
Query 81 LAHVYSGRELIEVATFRAPP--KKAVTSASGMILRDNNWGTIEQDFARRDFSINTLYYQP 138
+ V+ G+ EV TF+ + S +R ++E+D RRDF++N +
Sbjct 69 VVVVHKGK-AYEVTTFKTDGDYEDYRRPESVTFVR-----SLEEDLKRRDFTMNAI-AMD 121
Query 139 RKGIVLDFCDAVSDVKKRTLRLLGDPAQRFEEDPVRMLRALRFAAKLNFDIDPEILKIFD 198
G ++D +++R +R +G+ +RF ED +RM+RA+RF ++L F + P+ +
Sbjct 122 EYGTIIDPFGGREAIRRRIIRTVGEAEKRFREDALRMMRAVRFVSELGFALAPDTEQAI- 180
Query 199 VEMTQLLRDVSPHRLYDESQKLFTMGHLSRVLPMLIE 235
V+ LL +S R+ E +KL +R LP+L E
Sbjct 181 VQNAPLLAHISVERMTMEMEKLLGGPFAARALPLLAE 217
>Q9KC89 CC-adding tRNA nucleotidyltransferase [Halalkalibacterium
halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344
/ JCM 9153 / C-125)]
Length=375
Score = 101 bits (252), Expect = 1e-26
Identities = 69/207 (33%), Positives = 105/207 (51%), Gaps = 23/207 (11%)
Query 21 LDVIDSLNKAGYEAYIVGGGVRDLMLGLNPKDFDAVTNATPAQVKEVFGRRCRIIGRRFE 80
L ++ L G+EAYIVGG VRD +G PKD D VT+A+P +++ ++ + I R+F+
Sbjct 9 LSIVSELRDHGFEAYIVGGAVRDYHIGRKPKDVDVVTSASPEEIRTLYPHAFQ-INRQFQ 67
Query 81 LAHVYSGRELIEVATFRAPPKKAVTSASGMILRDNNWGTIEQDFARRDFSINTLYYQPRK 140
V+ + IEV+T R G+IE D RDF+IN +
Sbjct 68 TLTVHLQKVAIEVSTLRG-------------------GSIEDDLCSRDFTINAMAL-AMN 107
Query 141 GIVLDFCDAVSDVKKRTLRLLGDPAQRFEEDPVRMLRALRFAAKLNFDIDPEILKIFDVE 200
G ++D +D++ +R P RF+EDP+RMLRA RFA++L F + +
Sbjct 108 GDIIDPTGGKTDLENGVIRSF-HPEARFKEDPLRMLRAPRFASELGFTVAKGTAEAIKGS 166
Query 201 MTQLLRDVSPHRLYDESQKLFTMGHLS 227
+ LL DV+ R+ E +L H S
Sbjct 167 CS-LLADVAVERVEKELTQLMIGTHRS 192
>P42977 CCA-adding enzyme [Bacillus subtilis (strain 168)]
Length=397
Score = 100 bits (248), Expect = 6e-26
Identities = 73/222 (33%), Positives = 109/222 (49%), Gaps = 6/222 (3%)
Query 21 LDVIDSLNKAGYEAYIVGGGVRDLMLGLNPKDFDAVTNATPAQVKEVFGRRCRIIGRRFE 80
L V+ L +AG++AY VGG VRD + D D T+A P QV+ +F R + G+
Sbjct 9 LPVLRILIEAGHQAYFVGGAVRDSYMKRTIGDVDIATDAAPDQVERLFQRTVDV-GKEHG 67
Query 81 LAHVYSGRELIEVATFRAPPKKAVTSASGMILRDNNWGTIEQDFARRDFSINTLYYQPRK 140
V E EV TFR + ++E+D RRD +IN +
Sbjct 68 TIIVLWEDETYEVTTFRTESDYVDFRRPSEV---QFISSLEEDLKRRDLTINAMA-MTAD 123
Query 141 GIVLDFCDAVSDVKKRTLRLLGDPAQRFEEDPVRMLRALRFAAKLNFDIDPEILKIFDVE 200
G VLD+ D+ ++ +R +G P RF+ED +RMLRA+RF ++L F + PE + E
Sbjct 124 GKVLDYFGGKKDIDQKVIRTVGKPEDRFQEDALRMLRAVRFMSQLGFTLSPETEEAIAKE 183
Query 201 MTQLLRDVSPHRLYDESQKLFTMGHLSRVLPMLIEFDIWRQL 242
+ LL VS R E +KL + L LI+ ++ +L
Sbjct 184 KS-LLSHVSVERKTIEFEKLLQGRASRQALQTLIQTRLYEEL 224
Score = 20.0 bits (40), Expect = 3.7
Identities = 13/47 (28%), Positives = 21/47 (45%), Gaps = 0/47 (0%)
Query 290 DFYLQKGIVPAEARAQAGLDVLKRQATRTVIPRFAETFIREVWEMQT 336
D Y+++ I + A D ++R RTV I +WE +T
Sbjct 31 DSYMKRTIGDVDIATDAAPDQVERLFQRTVDVGKEHGTIIVLWEDET 77
>Q96Q11 CCA tRNA nucleotidyltransferase 1, mitochondrial [Homo
sapiens]
Length=434
Score = 98.6 bits (244), Expect = 3e-25
Identities = 72/241 (30%), Positives = 119/241 (49%), Gaps = 15/241 (6%)
Query 29 KAGYEAYIVGGGVRDLMLGLNPKDFDAVTNATPAQVKEVF-GRRCRIIGRRFELAHVYSG 87
K +E I GG VRDL+ G+ P+D D T ATP Q+KE+F R+I R E +
Sbjct 54 KENHELRIAGGAVRDLLNGVKPQDIDFATTATPTQMKEMFQSAGIRMINNRGEKHGTITA 113
Query 88 R---ELIEVATFRAPPKKAVTSASGMILRDNNWGTIEQDFARRDFSINTLYYQPRKGIVL 144
R E E+ T R A D W ++D RRD +IN+++ G +
Sbjct 114 RLHEENFEITTLRIDVTTDGRHAEVEFTTD--W---QKDAERRDLTINSMFL-GFDGTLF 167
Query 145 DFCDAVSDVKKRTLRLLGDPAQRFEEDPVRMLRALRFAAKL---NFDIDPEILKIFDVEM 201
D+ + D+K + +R +G QR +ED +R+LR RF ++ D DPE L+ E
Sbjct 168 DYFNGYEDLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIVDKPGDHDPETLEAI-AEN 226
Query 202 TQLLRDVSPHRLYDESQKLFTMGHLSRVLPMLIEFDIWRQLFADVKAEITPFIERAAKNT 261
+ L +S R++ E +K+ H++ ++ ++ + D+ + A + F ++ +KN
Sbjct 227 AKGLAGISGERIWVELKKILVGNHVNHLIHLIYDLDVAPYIGLPANASLEEF-DKVSKNV 285
Query 262 D 262
D
Sbjct 286 D 286
>Q5WGA1 CC-adding tRNA nucleotidyltransferase [Shouchella clausii
(strain KSM-K16)]
Length=376
Score = 94.7 bits (234), Expect = 3e-24
Identities = 66/197 (34%), Positives = 101/197 (51%), Gaps = 23/197 (12%)
Query 24 IDSLNKAGYEAYIVGGGVRDLMLGLNPKDFDAVTNATPAQVKEVFGRRCRIIGRRFELAH 83
+ +LN AG+EAYIVGG VRD +LG + D D T A+P QV ++F + I + +
Sbjct 11 VRTLNAAGFEAYIVGGAVRDYLLGKDVDDVDIATQASPHQVADIFTKGVH-INQEHKTVL 69
Query 84 VYSGRELIEVATFRAPPKKAVTSASGMILRDNNWGTIEQDFARRDFSINTLYYQPRKGIV 143
+ + IE+ T++ T+ +D +RDF+IN L + V
Sbjct 70 IPGEKGPIEITTYKGE-------------------TLAEDLQKRDFTINALAMTETRE-V 109
Query 144 LDFCDAVSDVKKRTLRLLGDPAQRFEEDPVRMLRALRFAAKLNFDIDPEILKIFDVEMTQ 203
+D D++KR LR D +R EDP+RMLRA RF + L F+ D +++K V+
Sbjct 110 IDPYGGRQDLQKRLLRSY-DAQKRLSEDPLRMLRAARFISSLGFEADRQLVKETTVQKAA 168
Query 204 LLRDVSPHRLYDESQKL 220
L R + R+ E +KL
Sbjct 169 LQR-CARERVVVELEKL 184
>Q8K1J6 CCA tRNA nucleotidyltransferase 1, mitochondrial [Mus
musculus]
Length=434
Score = 91.3 bits (225), Expect = 8e-23
Identities = 70/241 (29%), Positives = 118/241 (49%), Gaps = 15/241 (6%)
Query 29 KAGYEAYIVGGGVRDLMLGLNPKDFDAVTNATPAQVKEVF-GRRCRIIGRRFELAHVYSG 87
K +E I GG VRDL+ G+ P+D D T ATP Q+KE+F R+I + E +
Sbjct 54 KENHELRIAGGAVRDLLNGVKPQDVDFATTATPTQMKEMFQSAGIRMINNKGEKHGTITA 113
Query 88 R---ELIEVATFRAPPKKAVTSASGMILRDNNWGTIEQDFARRDFSINTLYYQPRKGIVL 144
R E EV T R A D W ++D RRD +IN+++ G +
Sbjct 114 RLHEENFEVTTLRIDVTTDGRHAEVEFTTD--W---QKDAERRDLTINSMFL-GFDGTLF 167
Query 145 DFCDAVSDVKKRTLRLLGDPAQRFEEDPVRMLRALRFAAKL---NFDIDPEILKIFDVEM 201
D+ + +D+K + +R +G QR +ED +R+LR RF ++ D D E L+ E
Sbjct 168 DYFNGYADLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIVDRPGDHDHETLEAI-AEN 226
Query 202 TQLLRDVSPHRLYDESQKLFTMGHLSRVLPMLIEFDIWRQLFADVKAEITPFIERAAKNT 261
+ L +S R++ E +K+ T H++ ++ ++ + + + A + F + +KN
Sbjct 227 AKGLAGISGERIWVELKKILTGDHVNHLIHLIYDLGVAPHIGLPANANLEEF-NKVSKNV 285
Query 262 D 262
+
Sbjct 286 E 286
>P06961 CCA-adding enzyme / 2'-nucleotidase / 2',3'-cyclic phosphodiesterase
/ Phosphatase [Escherichia coli (strain K12)]
Length=412
Score = 81.3 bits (199), Expect = 1e-19
Identities = 109/392 (28%), Positives = 164/392 (42%), Gaps = 62/392 (16%)
Query 35 YIVGGGVRDLMLGLNPKDFD-AVTNATPAQVKEVFGRRCRIIGRRFELAHVYSGRELIEV 93
Y+VGG VRD +LGL KD D V +TP +E+ + +GR F V+ + E
Sbjct 4 YLVGGAVRDALLGLPVKDRDWVVVGSTP---QEMLDAGYQQVGRDFP---VFLHPQTHEE 57
Query 94 ATFRAPPKKAVTSASGMILRDNNWGTIEQDFARRDFSINTLYYQPRKGIVLDFCDAVSDV 153
+K+ + +G T+E D RRD +IN L Q G ++D + + D+
Sbjct 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINAL-AQDDNGEIIDPYNGLGDL 116
Query 154 KKRTLRLLGDPAQRFEEDPVRMLRALRFAAK---LNFDIDPEILKIFDVEMTQL--LRDV 208
+ R LR + PA F EDP+R+LR RFAA+ L F I E L + EMT L +
Sbjct 117 QNRLLRHV-SPA--FGEDPLRVLRVARFAARYAHLGFRIADETLALMR-EMTHAGELEHL 172
Query 209 SPHRLYDESQKLFTMGHLSRVLPMLIEFDIWRQLFADVKAEI-TPFIERAAKNTDQRIQI 267
+P R++ E++ T + +L + R LF ++ A P + D I
Sbjct 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232
Query 268 GKTINPAFFYAVLLWRSFLERSDFYLQKGIVPAE------ARAQAGLDVLKRQATRTVIP 321
T++ A + + F L KG+ P E AG+ ++++ R +P
Sbjct 233 LMTLSMAAMLSPQVDVRFATLC-HDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVP 291
Query 322 RFAETFIREVWEMQT-----RLLNP--------------KPQQIEALA----GHARFRAG 358
R V E +LNP KPQ++E LA R R G
Sbjct 292 NEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTG 351
Query 359 FDFLLLREKSGDSSTQGMGEW----WEHYQSL 386
F +S+ G W WE QS+
Sbjct 352 F----------ESADYPQGRWLREAWEVAQSV 373
>O66728 A-adding tRNA nucleotidyltransferase [Aquifex aeolicus
(strain VF5)]
Length=824
Score = 80.5 bits (197), Expect = 5e-19
Identities = 78/293 (27%), Positives = 130/293 (44%), Gaps = 35/293 (12%)
Query 31 GYEAYIVGGGVRDLMLGLNPKDFDAVTNATPAQVKEVFGRRCRIIGR---RFELAHVYSG 87
G AYIVGG VRD++LG D D V ++ + RR + F AH+ G
Sbjct 451 GLRAYIVGGVVRDILLGKEVWDVDFVVEGNAIELAKELARRHGVNVHPFPEFGTAHLKIG 510
Query 88 RELIEVATFRA---PPKKAVTSASGMILRDNNWGTIEQDFARRDFSINTLYYQPRK---G 141
+ +E AT R P A ++++D RRDF+IN + G
Sbjct 511 KLKLEFATARRETYPRPGAYPKVEP--------ASLKEDLIRRDFTINAMAISVNLEDYG 562
Query 142 IVLDFCDAVSDVKKRTLRLLGDPAQRFEEDPVRMLRALRFAAKLNFDIDPEILKIFDVEM 201
++D+ + D+K + +R+L + F EDPVR+LRALRFA +LNF + K+ +
Sbjct 563 TLIDYFGGLRDLKDKVIRVLHPVS--FIEDPVRILRALRFAGRLNFKLSRSTEKLLKQAV 620
Query 202 T-QLLRDVSPHRLYDESQ---------KLFTMGHLSRVLPMLIEFDIWRQLFADVKAEIT 251
LL++ RL +E + ++ + RVL +IE W + +
Sbjct 621 NLGLLKEAPRGRLINEIKLALREDRFLEILELYRKYRVLEEIIEGFQWNEKVLQKLYALR 680
Query 252 PFIE-RAAKNTDQRIQIGKTINPAFFYAVLLWRSFLERSDFYLQKGIVPAEAR 303
++ A + +++RI G + +L+ ER +L++ P+ R
Sbjct 681 KVVDWHALEFSEERIDYG-----WLYLLILISNLDYERGKHFLEEMSAPSWVR 728
>Q9Y7U9 tRNA nucleotidyltransferase cca2 [Schizosaccharomyces
pombe (strain 972 / ATCC 24843)]
Length=484
Score = 75.1 bits (183), Expect = 2e-17
Identities = 75/303 (25%), Positives = 129/303 (43%), Gaps = 43/303 (14%)
Query 26 SLNKAGYEAYIVGGGVRDLMLGLNPKDFDAVTNATPAQVKEVFGRRCRIIGRRFELAH-- 83
S + + E + GG VRD +LGL+ D D N FE H
Sbjct 29 SSSSSSLEVRLAGGWVRDKLLGLSSDDLDVTLNKVTG---------VDFANSIFEYVHSL 79
Query 84 ----VYSGRELIEVATFRAPPKKAVTSASGMI---------LRDNNW-----------GT 119
V ++ + T K + +A+ + LR ++ GT
Sbjct 80 DSDSVIPYKDALGKLTVNPDQSKHLETATLSLFDLDIDFVGLRAESYDDKSRIPSVTPGT 139
Query 120 IEQDFARRDFSINTLYYQPRKGIVLDFCD-AVSDVKKRTLRLLGDPAQRFEEDPVRMLRA 178
+E D RRDF++NTL++ R + D D++ + L P Q F EDP+R+LR
Sbjct 140 VETDALRRDFTVNTLFFNIRTEKIEDITKRGYKDLQTKVLVTPISPLQSFLEDPLRILRG 199
Query 179 LRFAAKLNFDIDPEILK-IFDVEMTQLL-RDVSPHRLYDESQKLFTMGHLSRVLPMLIEF 236
+RFA++ F IDP ++ I D ++ + + VS R+ +E +K+ + L +L
Sbjct 200 IRFASRFEFTIDPSVVSAIQDPKVCKAFEKKVSKERVGEEIEKMLKGANAKLALQLLYST 259
Query 237 DIWRQLFADVKAEITPFIERAAKNTDQRIQIGKTINPAFFYAVLLWRSFLERSDFYLQKG 296
+ ++ F + AE I +A + T+ Q + A + L+ S E+ +L
Sbjct 260 NTYQFTFDTLPAEKEFQIPKALEATESLFQ-----SLALTFPKLMKLSEDEKIGLWLYVA 314
Query 297 IVP 299
++P
Sbjct 315 LIP 317
Lambda K H a alpha
0.323 0.137 0.401 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3817798
Database: 569e7975b05797fb1b4fe493b900a383.SwissProt.fasta
Posted date: May 8, 2024 1:26 PM
Number of letters in database: 10,123
Number of sequences in database: 23
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
