BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: cbce41cdccc378e18f674dc162ad75ba.SwissProt.fasta
           5 sequences; 3,238 total letters



Query= ACIAD3092

Length=313
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

O34798 Peptidoglycan-N-acetylmuramic acid deacetylase PdaC [Bacil...  42.4    6e-08
Q3SYU9 Major vault protein [Bos taurus]                               37.7    2e-06
Q9EQK5 Major vault protein [Mus musculus]                             36.2    7e-06
Q62667 Major vault protein [Rattus norvegicus]                        35.0    2e-05
Q58168 Uncharacterized protein MJ0758 [Methanocaldococcus jannasc...  23.5    0.042


>O34798 Peptidoglycan-N-acetylmuramic acid deacetylase PdaC [Bacillus 
subtilis (strain 168)]
Length=467

 Score = 42.4 bits (98),  Expect = 6e-08
 Identities = 34/183 (19%), Positives = 78/183 (43%), Gaps = 7/183 (4%)

Query  126  NSPLSAQQQLEQKVKPYVQSFIG-LDNELKALSGNHQIN---LMIKPSILKSQAPVATVV  181
            N P+   ++++  +K + +  +     E K +   H      L +   I+        +V
Sbjct  65   NYPVFKNEKMDSALKRFAEKEVRQFQKETKDVDQEHTTKRNELNVDYKIVHYAKQTVAIV  124

Query  182  LNTSSYLGGAHGSAIQQYYNFDLDHEKLLQLNDLLLPHQKAALEQRAHEAFKVWVMESKL  241
             N   Y+GGAHG  +++ +N+D   +  L ++D +       L + +  A+        +
Sbjct  125  FNEYKYIGGAHGQTVKKTFNYDFSKQAFLSIDD-IFKEDADYLHKLSLIAYHELKKNKDI  183

Query  242  A--NSVDEYEQAWKFKLSNNFLLGDHGLILQYGEYEIGPYAVGLPRLVVPYDQLNTILKP  299
            A  +++ +   A K +  + F + +  + L +  Y++    +G   + +    L  ILK 
Sbjct  184  AADDALLKEGTAPKKENFSRFAIKEDYIELYFDTYQVAAGYLGEQSIAIKKSLLKDILKE  243

Query  300  EYL  302
            +Y+
Sbjct  244  QYI  246


>Q3SYU9 Major vault protein [Bos taurus]
Length=890

 Score = 37.7 bits (86),  Expect = 2e-06
 Identities = 45/146 (31%), Positives = 68/146 (47%), Gaps = 11/146 (8%)

Query  20   LVACQPKSTPADSSEKASAAQTSDAQVARLEGQSVKLNVELPACDGNNCPEFEVERLTSN  79
            L+  +  ST  +S+  A A   S A+ AR+EG+   L  +L A       E E+ER    
Sbjct  706  LLELEALSTAVESTGTAKAEAESRAEAARIEGEGAVLQAKLKAEALAIETEAELER----  761

Query  80   YPWIDQKIDAEILKNLAHI-LEISKAQQTAQESKKLAEPAASAVADQNSPLSAQQQLEQK  138
               + +  + E+L   A + LE+SKAQQ A+   K  +    A+        A    E +
Sbjct  762  ---VKKVRELELLYARAQLELEVSKAQQLAEVEVKKFKQMTEALGPSTIRDMAVAGPEMQ  818

Query  139  VKPYVQSFIGLDNELKALSGNHQINL  164
            VK  +QS +GL + L    G+  INL
Sbjct  819  VK-LLQS-LGLKSTL-ITDGSTPINL  841


 Score = 20.0 bits (40),  Expect = 0.76
 Identities = 32/156 (21%), Positives = 54/156 (35%), Gaps = 25/156 (16%)

Query  6    HKTSVAIIFGSVFFLVACQPKS-------TPAD-----------SSEKASAAQTSDAQVA  47
            HK S  II  +VF     + K         P D           SS    + +  D +  
Sbjct  592  HKNSARIIRTAVFGFETQETKGPDTMALPQPRDRAVFPQNGLVVSSVDVQSVEPVDQRTR  651

Query  48   RLEGQSVKLNVELPACDGNNCPEFEVERL-------TSNYPWIDQKIDAEILKNLAHILE  100
                +SV+L +E+         + E +RL             +DQ    +  + L  +  
Sbjct  652  DALQRSVQLAIEIATNSQEAAAKHEAQRLEQEARGRLERQKILDQSEAEKARRELLELEA  711

Query  101  ISKAQQTAQESKKLAEPAASAVADQNSPLSAQQQLE  136
            +S A ++   +K  AE  A A   +      Q +L+
Sbjct  712  LSTAVESTGTAKAEAESRAEAARIEGEGAVLQAKLK  747


>Q9EQK5 Major vault protein [Mus musculus]
Length=861

 Score = 36.2 bits (82),  Expect = 7e-06
 Identities = 32/99 (32%), Positives = 50/99 (51%), Gaps = 9/99 (9%)

Query  20   LVACQPKSTPADSSEKASAAQTSDAQVARLEGQSVKLNVELPACDGNNCPEFEVERLTSN  79
            L+  +  S   +S+  A A   S A+ AR+EG+   L  +L A       E E+ER    
Sbjct  706  LLELEAMSMAVESTGNAKAEAESRAEAARIEGEGSVLQAKLKAQALAIETEAELER----  761

Query  80   YPWIDQKIDAEILKNLAHI-LEISKAQQTAQ-ESKKLAE  116
               + +  + E++ + A + LE+SKAQQ A  E+KK  E
Sbjct  762  ---VKKVREMELIYSRAQLELEVSKAQQLADVEAKKFKE  797


 Score = 19.6 bits (39),  Expect = 1.0
 Identities = 33/154 (21%), Positives = 55/154 (36%), Gaps = 27/154 (18%)

Query  6    HKTSVAIIFGSVFFLV------------------ACQPKSTPADSSEKASAAQTSDAQVA  47
            HK S  II  +VF                     A  P++    SS    + +  D +  
Sbjct  592  HKNSARIIRMAVFGFEMSEDAGPDGALLPRARDRAVFPQNGLVVSSVDVQSVEPVDQRTR  651

Query  48   RLEGQSVKLNVELPACDGNNCPEFEVERL-------TSNYPWIDQKIDAEILKNLAHILE  100
                +SV+L +E+         + E +RL             +DQ    +  K L  +  
Sbjct  652  DALQRSVQLAIEITTNSQEAAAKHEAQRLEQEARGRLERQKILDQSEAEKARKELLELEA  711

Query  101  ISKAQQTAQESKKLAEPAASA--VADQNSPLSAQ  132
            +S A ++   +K  AE  A A  +  + S L A+
Sbjct  712  MSMAVESTGNAKAEAESRAEAARIEGEGSVLQAK  745


>Q62667 Major vault protein [Rattus norvegicus]
Length=861

 Score = 35.0 bits (79),  Expect = 2e-05
 Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 9/99 (9%)

Query  20   LVACQPKSTPADSSEKASAAQTSDAQVARLEGQSVKLNVELPACDGNNCPEFEVERLTSN  79
            L+  +  S   +S+  A A   S A+ AR+EG+   L  +L A       E E+ER    
Sbjct  706  LLELEAMSMAVESTGNAKAEAESRAEAARIEGEGSVLQAKLKAQALAIETEAELER----  761

Query  80   YPWIDQKIDAEILKNLAHI-LEISKAQQTAQ-ESKKLAE  116
               + +  + E++   A + LE+SKAQQ A  E+KK  E
Sbjct  762  ---VKKVREMELIYARAQLELEVSKAQQLANVEAKKFKE  797


 Score = 19.6 bits (39),  Expect = 1.0
 Identities = 33/154 (21%), Positives = 55/154 (36%), Gaps = 27/154 (18%)

Query  6    HKTSVAIIFGSVFFL------------------VACQPKSTPADSSEKASAAQTSDAQVA  47
            HK S  II  +VF                     A  P++    SS    + +  D +  
Sbjct  592  HKNSARIIRMAVFGFEMSEDTGPDGTLLPKARDQAVFPQNGLVVSSVDVQSVEPVDQRTR  651

Query  48   RLEGQSVKLNVELPACDGNNCPEFEVERL-------TSNYPWIDQKIDAEILKNLAHILE  100
                +SV+L +E+         + E +RL             +DQ    +  K L  +  
Sbjct  652  DALQRSVQLAIEITTNSQEAAAKHEAQRLEQEARGRLERQKILDQSEAEKARKELLELEA  711

Query  101  ISKAQQTAQESKKLAEPAASA--VADQNSPLSAQ  132
            +S A ++   +K  AE  A A  +  + S L A+
Sbjct  712  MSMAVESTGNAKAEAESRAEAARIEGEGSVLQAK  745


>Q58168 Uncharacterized protein MJ0758 [Methanocaldococcus jannaschii 
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / 
NBRC 100440)]
Length=159

 Score = 23.5 bits (49),  Expect = 0.042
 Identities = 21/95 (22%), Positives = 45/95 (47%), Gaps = 5/95 (5%)

Query  71   FEVERLTSNYPWIDQKIDAEILKNL-AHILEISKAQQTAQESKKLAEPAASAVADQNSPL  129
            +E+ +L  +  +I + +  E +KNL  +   +S+     +E KK+     +   D     
Sbjct  51   YEMIKLLKDLGFIKENMSNEEIKNLFVNTFGLSEDLNIVEEDKKVIFEVINPTLDLFLKK  110

Query  130  SAQQQLEQKVKPYVQSFIGLDNELKALSGNHQINL  164
              ++ L+     YV  F+ L +E+ ++S N ++ L
Sbjct  111  LMEENLKP----YVCPFMYLLSEIYSVSNNCRLML  141



Lambda      K        H        a         alpha
   0.316    0.131    0.371    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 811842


  Database: cbce41cdccc378e18f674dc162ad75ba.SwissProt.fasta
    Posted date:  May 30, 2024  12:16 PM
  Number of letters in database: 3,238
  Number of sequences in database:  5



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40