ACIAD3151 / SwissProt Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 88464320c4493772420b67b0ad1c8deb.SwissProt.fasta
           1 sequences; 284 total letters



Query= ACIAD3151

Length=203
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q86KR9 Prolyl 4-hydroxylase subunit alpha [Dictyostelium discoideum]  55.8    4e-14


>Q86KR9 Prolyl 4-hydroxylase subunit alpha [Dictyostelium discoideum]
Length=284

 Score = 55.8 bits (133),  Expect = 4e-14
 Identities = 61/218 (28%), Positives = 99/218 (45%), Gaps = 41/218 (19%)

Query  16   LDELNQHGFSLLDH-LHPQALMNQLVQECTTHLQDFR--EAAIQNGVVS----NIRSDHI  68
            L++L + G+ ++D+ L+    +N +  E     ++ +  EA +  G       +IR D+I
Sbjct  67   LNQLEKKGYLIIDNFLNDLNKINLIYDESYNQFKENKLIEAGMNKGTDKWKDKSIRGDYI  126

Query  69   LWI--DDALPIAQKHLQ--------LLERLSHEINRAFYTGIQNI-----EAHFACYRAG  113
             WI  D    I  K L         LL++L   I   F   I N      +   A Y  G
Sbjct  127  QWIHRDSNSRIQDKDLSSTIRNINYLLDKLDL-IKNEFDNVIPNFNSIKTQTQLAVYLNG  185

Query  114  EFYALHRDNPQQKNN----RVISTVYYLHPEWKEHWGGQLRLQDKN------------GQ  157
              Y  HRD+     +    R I+ +YY++ +WK+  GG+LRL   N             +
Sbjct  186  GRYIKHRDSFYSSESLTISRRITMIYYVNKDWKKGDGGELRLYTNNPNNTNQKELKQTEE  245

Query  158  WHVIHPEPNRLVLFQSDLL-HEVL-LSHQQRLSITAWL  193
            +  I P  +RL++F S  L HEVL  + + R++IT W+
Sbjct  246  FIDIEPIADRLLIFLSPFLEHEVLQCNFEPRIAITTWI  283


 Score = 14.2 bits (25),  Expect = 2.5
 Identities = 5/11 (45%), Positives = 7/11 (64%), Gaps = 0/11 (0%)

Query  123  PQQKNNRVIST  133
            PQQ N+   S+
Sbjct  21   PQQNNDESSSS  31



Lambda      K        H        a         alpha
   0.325    0.138    0.442    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 46980


  Database: 88464320c4493772420b67b0ad1c8deb.SwissProt.fasta
    Posted date:  May 30, 2024  11:53 PM
  Number of letters in database: 284
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40