BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 88464320c4493772420b67b0ad1c8deb.SwissProt.fasta
1 sequences; 284 total letters
Query= ACIAD3151
Length=203
Score E
Sequences producing significant alignments: (Bits) Value
Q86KR9 Prolyl 4-hydroxylase subunit alpha [Dictyostelium discoideum] 55.8 4e-14
>Q86KR9 Prolyl 4-hydroxylase subunit alpha [Dictyostelium discoideum]
Length=284
Score = 55.8 bits (133), Expect = 4e-14
Identities = 61/218 (28%), Positives = 99/218 (45%), Gaps = 41/218 (19%)
Query 16 LDELNQHGFSLLDH-LHPQALMNQLVQECTTHLQDFR--EAAIQNGVVS----NIRSDHI 68
L++L + G+ ++D+ L+ +N + E ++ + EA + G +IR D+I
Sbjct 67 LNQLEKKGYLIIDNFLNDLNKINLIYDESYNQFKENKLIEAGMNKGTDKWKDKSIRGDYI 126
Query 69 LWI--DDALPIAQKHLQ--------LLERLSHEINRAFYTGIQNI-----EAHFACYRAG 113
WI D I K L LL++L I F I N + A Y G
Sbjct 127 QWIHRDSNSRIQDKDLSSTIRNINYLLDKLDL-IKNEFDNVIPNFNSIKTQTQLAVYLNG 185
Query 114 EFYALHRDNPQQKNN----RVISTVYYLHPEWKEHWGGQLRLQDKN------------GQ 157
Y HRD+ + R I+ +YY++ +WK+ GG+LRL N +
Sbjct 186 GRYIKHRDSFYSSESLTISRRITMIYYVNKDWKKGDGGELRLYTNNPNNTNQKELKQTEE 245
Query 158 WHVIHPEPNRLVLFQSDLL-HEVL-LSHQQRLSITAWL 193
+ I P +RL++F S L HEVL + + R++IT W+
Sbjct 246 FIDIEPIADRLLIFLSPFLEHEVLQCNFEPRIAITTWI 283
Score = 14.2 bits (25), Expect = 2.5
Identities = 5/11 (45%), Positives = 7/11 (64%), Gaps = 0/11 (0%)
Query 123 PQQKNNRVIST 133
PQQ N+ S+
Sbjct 21 PQQNNDESSSS 31
Lambda K H a alpha
0.325 0.138 0.442 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 46980
Database: 88464320c4493772420b67b0ad1c8deb.SwissProt.fasta
Posted date: May 30, 2024 11:53 PM
Number of letters in database: 284
Number of sequences in database: 1
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40