BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 9ca79691d6227937e54cb36abd97c2b2.TrEMBL.fasta
15 sequences; 2,424 total letters
Query= ACIAD3160
Length=160
Score E
Sequences producing significant alignments: (Bits) Value
A0A7G2SJ60 Endoribonuclease YbeY [Acinetobacter sp] 315 7e-116
A0A009YJS2 Endoribonuclease YbeY [Acinetobacter sp. 479375] 276 8e-101
N9DIS1 Endoribonuclease YbeY [Acinetobacter ursingii ANC 3649] 274 1e-99
A0A427PTF9 Endoribonuclease YbeY [Acinetobacter sp. FDAARGOS_515] 274 1e-99
A0A3A8EFD7 Endoribonuclease YbeY [Acinetobacter guerrae] 273 2e-99
A0A7T9Z7Z6 Endoribonuclease YbeY [Acinetobacter ursingii] 270 2e-98
N9AI36 Endoribonuclease YbeY [Acinetobacter soli NIPH 2899] 264 6e-96
A0A1P8EJW2 Endoribonuclease YbeY [Acinetobacter soli] 264 6e-96
A0A0M1I2A0 Endoribonuclease YbeY [Acinetobacter sp. C15] 263 3e-95
A0A3R9BJZ5 Endoribonuclease YbeY [Acinetobacter soli] 263 3e-95
A0A1Y3D1N8 Endoribonuclease YbeY [Acinetobacter sp. ANC 4169] 253 1e-91
A0A4R0ES66 Endoribonuclease YbeY [Acinetobacter sp. ANC 4216] 253 2e-91
A0A8B6X9P1 Endoribonuclease YbeY [Derxia gummosa DSM 723] 90.5 7e-27
K9KYC6 Endoribonuclease YbeY [Streptococcus australis] 68.9 5e-19
Q54317 Endoribonuclease YbeY [Brachyspira hyodysenteriae] 44.7 4e-10
>A0A7G2SJ60 Endoribonuclease YbeY [Acinetobacter sp]
Length=159
Score = 315 bits (806), Expect = 7e-116
Identities = 157/159 (99%), Positives = 158/159 (99%), Gaps = 0/159 (0%)
Query 1 LKLNLSLQQAFKSPDLALKRAHIKKAIETTLDHVEVKTDSEIGIACVDHEQSHRLNLEYR 60
+KLNLSLQQAFKSPDLALKRAHIKKAIETTLDHVEVKTDSEIGIACVDHEQSHRLNLEYR
Sbjct 1 MKLNLSLQQAFKSPDLALKRAHIKKAIETTLDHVEVKTDSEIGIACVDHEQSHRLNLEYR 60
Query 61 GKDKSTNVLSFPSDIPEEVLPLLDARPLGDLVICIPVVLDEAIEQHKTAQAHFMHMLVHG 120
GKDKSTNVLSFPSDIPEE LPLLDARPLGDLVICIPVVLDEAIEQHKTAQAHFMHMLVHG
Sbjct 61 GKDKSTNVLSFPSDIPEEGLPLLDARPLGDLVICIPVVLDEAIEQHKTAQAHFMHMLVHG 120
Query 121 TLHLLGYDHETSDEDAEEMEALEIEILAKLGLENPYQEQ 159
TLHLLGYDHETSDEDAEEMEALEIEILAKLGLENPYQEQ
Sbjct 121 TLHLLGYDHETSDEDAEEMEALEIEILAKLGLENPYQEQ 159
>A0A009YJS2 Endoribonuclease YbeY [Acinetobacter sp. 479375]
Length=159
Score = 276 bits (707), Expect = 8e-101
Identities = 137/159 (86%), Positives = 145/159 (91%), Gaps = 0/159 (0%)
Query 1 LKLNLSLQQAFKSPDLALKRAHIKKAIETTLDHVEVKTDSEIGIACVDHEQSHRLNLEYR 60
+KLNLSLQQ FKS DL LKR +KKAIE TL HV++ +D EIGIACVDHE+SHRLNLEYR
Sbjct 1 MKLNLSLQQEFKSSDLVLKRVQLKKAIEVTLRHVDIDSDCEIGIACVDHEESHRLNLEYR 60
Query 61 GKDKSTNVLSFPSDIPEEVLPLLDARPLGDLVICIPVVLDEAIEQHKTAQAHFMHMLVHG 120
GKDKSTNVLSFPSDIPEEVLPLLDARPLGDLVICIPVVL EAIEQ+KTA HFMHMLVHG
Sbjct 61 GKDKSTNVLSFPSDIPEEVLPLLDARPLGDLVICIPVVLQEAIEQYKTAHDHFMHMLVHG 120
Query 121 TLHLLGYDHETSDEDAEEMEALEIEILAKLGLENPYQEQ 159
TLHLLGYDHE SDEDAEEMEALEIEILAKLGLENPY E+
Sbjct 121 TLHLLGYDHELSDEDAEEMEALEIEILAKLGLENPYLER 159
>N9DIS1 Endoribonuclease YbeY [Acinetobacter ursingii ANC 3649]
Length=159
Score = 274 bits (700), Expect = 1e-99
Identities = 136/159 (86%), Positives = 143/159 (90%), Gaps = 0/159 (0%)
Query 1 LKLNLSLQQAFKSPDLALKRAHIKKAIETTLDHVEVKTDSEIGIACVDHEQSHRLNLEYR 60
+KLNLSLQQ FKS DL LKR +KK IE TL HV++ +D EIGIACVDHE+SHRLNLEYR
Sbjct 1 MKLNLSLQQEFKSSDLVLKRVQLKKTIEVTLRHVDIDSDCEIGIACVDHEESHRLNLEYR 60
Query 61 GKDKSTNVLSFPSDIPEEVLPLLDARPLGDLVICIPVVLDEAIEQHKTAQAHFMHMLVHG 120
GKDKSTNVLSFPSDIPEEVLPLLDARPLGDLVICIPVVL EAIEQ KTA HFMHMLVHG
Sbjct 61 GKDKSTNVLSFPSDIPEEVLPLLDARPLGDLVICIPVVLQEAIEQDKTAHDHFMHMLVHG 120
Query 121 TLHLLGYDHETSDEDAEEMEALEIEILAKLGLENPYQEQ 159
TLHLLGYDHE SDEDAEEMEALEIEILAKLGLENPY E+
Sbjct 121 TLHLLGYDHELSDEDAEEMEALEIEILAKLGLENPYLER 159
>A0A427PTF9 Endoribonuclease YbeY [Acinetobacter sp. FDAARGOS_515]
Length=159
Score = 274 bits (700), Expect = 1e-99
Identities = 136/159 (86%), Positives = 143/159 (90%), Gaps = 0/159 (0%)
Query 1 LKLNLSLQQAFKSPDLALKRAHIKKAIETTLDHVEVKTDSEIGIACVDHEQSHRLNLEYR 60
+KLNLSLQQ FKS DL LKR +KK IE TL HV++ +D EIGIACVDHE+SHRLNLEYR
Sbjct 1 MKLNLSLQQEFKSSDLVLKRVQLKKTIEVTLRHVDIDSDCEIGIACVDHEESHRLNLEYR 60
Query 61 GKDKSTNVLSFPSDIPEEVLPLLDARPLGDLVICIPVVLDEAIEQHKTAQAHFMHMLVHG 120
GKDKSTNVLSFPSDIPEEVLPLLDARPLGDLVICIPVVL EAIEQ KTA HFMHMLVHG
Sbjct 61 GKDKSTNVLSFPSDIPEEVLPLLDARPLGDLVICIPVVLQEAIEQDKTAHDHFMHMLVHG 120
Query 121 TLHLLGYDHETSDEDAEEMEALEIEILAKLGLENPYQEQ 159
TLHLLGYDHE SDEDAEEMEALEIEILAKLGLENPY E+
Sbjct 121 TLHLLGYDHELSDEDAEEMEALEIEILAKLGLENPYLER 159
>A0A3A8EFD7 Endoribonuclease YbeY [Acinetobacter guerrae]
Length=159
Score = 273 bits (698), Expect = 2e-99
Identities = 134/159 (84%), Positives = 144/159 (91%), Gaps = 0/159 (0%)
Query 1 LKLNLSLQQAFKSPDLALKRAHIKKAIETTLDHVEVKTDSEIGIACVDHEQSHRLNLEYR 60
+KLNLSLQQ FKSPDL LKR +KKAIETTL HV+++ D EIGIACVD+++SHRLNLEYR
Sbjct 1 MKLNLSLQQEFKSPDLVLKRVQLKKAIETTLRHVDIENDCEIGIACVDNDESHRLNLEYR 60
Query 61 GKDKSTNVLSFPSDIPEEVLPLLDARPLGDLVICIPVVLDEAIEQHKTAQAHFMHMLVHG 120
GKDK TNVLSFPSDIPEEVLPLLDA+PLGDLVICIPVVL EAIEQHK A HFMHMLVHG
Sbjct 61 GKDKPTNVLSFPSDIPEEVLPLLDAQPLGDLVICIPVVLQEAIEQHKIAHEHFMHMLVHG 120
Query 121 TLHLLGYDHETSDEDAEEMEALEIEILAKLGLENPYQEQ 159
TLHLLGYDHE S+EDAEEMEALE EILAKLGLENPY EQ
Sbjct 121 TLHLLGYDHELSEEDAEEMEALETEILAKLGLENPYLEQ 159
>A0A7T9Z7Z6 Endoribonuclease YbeY [Acinetobacter ursingii]
Length=159
Score = 270 bits (691), Expect = 2e-98
Identities = 135/159 (85%), Positives = 143/159 (90%), Gaps = 0/159 (0%)
Query 1 LKLNLSLQQAFKSPDLALKRAHIKKAIETTLDHVEVKTDSEIGIACVDHEQSHRLNLEYR 60
+KLNLSLQQ FKS DL LKR +KKAIE TL HV++ +D EIGIACVDHE+SHRLNLEYR
Sbjct 1 MKLNLSLQQEFKSSDLVLKRVQLKKAIEVTLRHVDIDSDCEIGIACVDHEESHRLNLEYR 60
Query 61 GKDKSTNVLSFPSDIPEEVLPLLDARPLGDLVICIPVVLDEAIEQHKTAQAHFMHMLVHG 120
GKDKSTNVLSFPSDIPEEVLPLLDA PLGDLVICIPVVL EAIEQ KTA HFMHMLVHG
Sbjct 61 GKDKSTNVLSFPSDIPEEVLPLLDALPLGDLVICIPVVLKEAIEQDKTAHDHFMHMLVHG 120
Query 121 TLHLLGYDHETSDEDAEEMEALEIEILAKLGLENPYQEQ 159
TLHLLGYDHE SDE+AEEMEALEIEILAKLGLENPY E+
Sbjct 121 TLHLLGYDHELSDENAEEMEALEIEILAKLGLENPYLER 159
>N9AI36 Endoribonuclease YbeY [Acinetobacter soli NIPH 2899]
Length=160
Score = 264 bits (675), Expect = 6e-96
Identities = 131/159 (82%), Positives = 142/159 (89%), Gaps = 0/159 (0%)
Query 1 LKLNLSLQQAFKSPDLALKRAHIKKAIETTLDHVEVKTDSEIGIACVDHEQSHRLNLEYR 60
+KLNLSLQ +SPDL LKRA +KKAIE TL HV+V++D EIGIACVDHE+SHRLNLEYR
Sbjct 1 MKLNLSLQDDVQSPDLILKRAPLKKAIEMTLRHVDVQSDCEIGIACVDHEESHRLNLEYR 60
Query 61 GKDKSTNVLSFPSDIPEEVLPLLDARPLGDLVICIPVVLDEAIEQHKTAQAHFMHMLVHG 120
GKDKSTNVLSFPSD PE++LPLLDARPLGDLVICIPVVL EAI+Q K A HFMHMLVHG
Sbjct 61 GKDKSTNVLSFPSDFPEDILPLLDARPLGDLVICIPVVLQEAIDQKKAAYDHFMHMLVHG 120
Query 121 TLHLLGYDHETSDEDAEEMEALEIEILAKLGLENPYQEQ 159
TLHLLGYDHE S+EDAEEMEALEIEILAKLGL NPY EQ
Sbjct 121 TLHLLGYDHEISEEDAEEMEALEIEILAKLGLANPYLEQ 159
>A0A1P8EJW2 Endoribonuclease YbeY [Acinetobacter soli]
Length=160
Score = 264 bits (675), Expect = 6e-96
Identities = 131/159 (82%), Positives = 142/159 (89%), Gaps = 0/159 (0%)
Query 1 LKLNLSLQQAFKSPDLALKRAHIKKAIETTLDHVEVKTDSEIGIACVDHEQSHRLNLEYR 60
+KLNLSLQ +SPDL LKRA +KKAIE TL HV+V++D EIGIACVDHE+SHRLNLEYR
Sbjct 1 MKLNLSLQDDVQSPDLILKRAPLKKAIEMTLRHVDVQSDCEIGIACVDHEESHRLNLEYR 60
Query 61 GKDKSTNVLSFPSDIPEEVLPLLDARPLGDLVICIPVVLDEAIEQHKTAQAHFMHMLVHG 120
GKDKSTNVLSFPSD PE++LPLLDARPLGDLVICIPVVL EAI+Q K A HFMHMLVHG
Sbjct 61 GKDKSTNVLSFPSDFPEDILPLLDARPLGDLVICIPVVLQEAIDQKKAAYDHFMHMLVHG 120
Query 121 TLHLLGYDHETSDEDAEEMEALEIEILAKLGLENPYQEQ 159
TLHLLGYDHE S+EDAEEMEALEIEILAKLGL NPY EQ
Sbjct 121 TLHLLGYDHEISEEDAEEMEALEIEILAKLGLANPYLEQ 159
>A0A0M1I2A0 Endoribonuclease YbeY [Acinetobacter sp. C15]
Length=160
Score = 263 bits (671), Expect = 3e-95
Identities = 130/159 (82%), Positives = 141/159 (89%), Gaps = 0/159 (0%)
Query 1 LKLNLSLQQAFKSPDLALKRAHIKKAIETTLDHVEVKTDSEIGIACVDHEQSHRLNLEYR 60
+KLNLSLQ +SPDL LKRA +KKAIE TL HV+V++D EIGIACVDHE+SHRLNLEYR
Sbjct 1 MKLNLSLQDDVQSPDLILKRAPLKKAIEMTLRHVDVQSDCEIGIACVDHEESHRLNLEYR 60
Query 61 GKDKSTNVLSFPSDIPEEVLPLLDARPLGDLVICIPVVLDEAIEQHKTAQAHFMHMLVHG 120
GKDKSTNVLSFPSD PE++LPLLDARPLGDLVICIPVVL EAI+Q K HFMHMLVHG
Sbjct 61 GKDKSTNVLSFPSDFPEDILPLLDARPLGDLVICIPVVLQEAIDQKKAVYDHFMHMLVHG 120
Query 121 TLHLLGYDHETSDEDAEEMEALEIEILAKLGLENPYQEQ 159
TLHLLGYDHE S+EDAEEMEALEIEILAKLGL NPY EQ
Sbjct 121 TLHLLGYDHEISEEDAEEMEALEIEILAKLGLANPYLEQ 159
>A0A3R9BJZ5 Endoribonuclease YbeY [Acinetobacter soli]
Length=160
Score = 263 bits (671), Expect = 3e-95
Identities = 131/159 (82%), Positives = 141/159 (89%), Gaps = 0/159 (0%)
Query 1 LKLNLSLQQAFKSPDLALKRAHIKKAIETTLDHVEVKTDSEIGIACVDHEQSHRLNLEYR 60
+KLNLSLQ +SPDL LKRA +KKAIE TL HV V++D EIGIACVDHE+SHRLNLEYR
Sbjct 1 MKLNLSLQDDVQSPDLILKRAPLKKAIEMTLRHVGVQSDCEIGIACVDHEESHRLNLEYR 60
Query 61 GKDKSTNVLSFPSDIPEEVLPLLDARPLGDLVICIPVVLDEAIEQHKTAQAHFMHMLVHG 120
GKDKSTNVLSFPSD PE++LPLLDARPLGDLVICIPVVL EAI+Q K A HFMHMLVHG
Sbjct 61 GKDKSTNVLSFPSDFPEDILPLLDARPLGDLVICIPVVLQEAIDQKKAAYDHFMHMLVHG 120
Query 121 TLHLLGYDHETSDEDAEEMEALEIEILAKLGLENPYQEQ 159
TLHLLGYDHE S+EDAEEMEALEIEILAKLGL NPY EQ
Sbjct 121 TLHLLGYDHEISEEDAEEMEALEIEILAKLGLANPYLEQ 159
>A0A1Y3D1N8 Endoribonuclease YbeY [Acinetobacter sp. ANC 4169]
Length=159
Score = 253 bits (647), Expect = 1e-91
Identities = 125/159 (79%), Positives = 139/159 (87%), Gaps = 0/159 (0%)
Query 1 LKLNLSLQQAFKSPDLALKRAHIKKAIETTLDHVEVKTDSEIGIACVDHEQSHRLNLEYR 60
+KLNLSLQQ F+SP+L LKRA+IKK IET L ++V D EIGIACVD+ +SH+LNLEYR
Sbjct 1 MKLNLSLQQDFQSPELVLKRAYIKKVIETALRFIDVDQDCEIGIACVDNAESHKLNLEYR 60
Query 61 GKDKSTNVLSFPSDIPEEVLPLLDARPLGDLVICIPVVLDEAIEQHKTAQAHFMHMLVHG 120
KDK TNVLSFPSDIPEEVLP+LDA P+GDLVICIPVVL EAIEQ+KT HF HMLVHG
Sbjct 61 QKDKPTNVLSFPSDIPEEVLPMLDALPIGDLVICIPVVLQEAIEQNKTPIEHFTHMLVHG 120
Query 121 TLHLLGYDHETSDEDAEEMEALEIEILAKLGLENPYQEQ 159
TLHL+GYDHETSDEDAEEMEALEIEILAKLG +NPY EQ
Sbjct 121 TLHLMGYDHETSDEDAEEMEALEIEILAKLGFDNPYTEQ 159
>A0A4R0ES66 Endoribonuclease YbeY [Acinetobacter sp. ANC 4216]
Length=160
Score = 253 bits (646), Expect = 2e-91
Identities = 124/159 (78%), Positives = 140/159 (88%), Gaps = 0/159 (0%)
Query 1 LKLNLSLQQAFKSPDLALKRAHIKKAIETTLDHVEVKTDSEIGIACVDHEQSHRLNLEYR 60
+KLNLSLQQ F+SP+L LKRA+IKK IETTL ++V D EIGIACVD+++SH+LNLEYR
Sbjct 1 MKLNLSLQQDFQSPELVLKRAYIKKVIETTLRFIDVDQDCEIGIACVDNDESHKLNLEYR 60
Query 61 GKDKSTNVLSFPSDIPEEVLPLLDARPLGDLVICIPVVLDEAIEQHKTAQAHFMHMLVHG 120
KDK TNVLSFPSD+PEEVL +LDA P+GDLVICIPVVL EAI+Q+KT HF HMLVHG
Sbjct 61 QKDKPTNVLSFPSDVPEEVLAMLDALPIGDLVICIPVVLQEAIDQNKTPIEHFTHMLVHG 120
Query 121 TLHLLGYDHETSDEDAEEMEALEIEILAKLGLENPYQEQ 159
TLHL+GYDHETSDEDAEEMEALEIEILAKLG ENPY EQ
Sbjct 121 TLHLMGYDHETSDEDAEEMEALEIEILAKLGFENPYTEQ 159
>A0A8B6X9P1 Endoribonuclease YbeY [Derxia gummosa DSM 723]
Length=205
Score = 90.5 bits (223), Expect = 7e-27
Identities = 47/120 (39%), Positives = 73/120 (61%), Gaps = 7/120 (6%)
Query 39 DSEIGIACVDHEQSHRLNLEYRGKDKSTNVLSFPSDIPEEVLPLLDARPL-GDLVICIPV 97
D + V ++ LN ++RG+D +TNVL+F P++ D+ P+ D+V+C+PV
Sbjct 47 DCVFTVRFVGAKEGRALNRDHRGRDYATNVLTFNLHDPDD-----DSAPVEADIVVCVPV 101
Query 98 VLDEAIEQHKTAQAHFMHMLVHGTLHLLGYDHETSDEDAEEMEALEIEILAKLGLENPYQ 157
V EA Q K+ + H HM++H LH GY+HE D++A+ MEALE IL + + +PYQ
Sbjct 102 VAREASGQRKSFEHHCAHMVIHAVLHACGYEHE-EDDEADAMEALETRILRRFRIADPYQ 160
Score = 15.8 bits (29), Expect = 5.0
Identities = 8/12 (67%), Positives = 8/12 (67%), Gaps = 0/12 (0%)
Query 17 ALKRAHIKKAIE 28
A KRA KKA E
Sbjct 192 AKKRAAKKKAAE 203
>K9KYC6 Endoribonuclease YbeY [Streptococcus australis]
Length=165
Score = 68.9 bits (167), Expect = 5e-19
Identities = 46/132 (35%), Positives = 68/132 (52%), Gaps = 18/132 (14%)
Query 37 KTDSEIGIACVDHEQSHRLNLEYRGKDKSTNVLSFP--------------SDIPE--EVL 80
K D E+ + V +E+SH LNLEYR D+ T+V+S D PE E++
Sbjct 33 KEDKEMAVTFVTNERSHELNLEYRDTDRPTDVISLEYKPEMDIAFSEEDLEDHPELAEMM 92
Query 81 PLLDARPLGDLVICIPVVLDEAIEQHKTAQAHFMHMLVHGTLHLLGYDHETSDEDAEEME 140
D +G+L I + ++A E + + + VHG LH+ GYDH T +E+ +EM
Sbjct 93 AEFDTY-IGELFISVDKAREQAAEYGHSFEREMGFLAVHGFLHINGYDHYTPEEE-KEMF 150
Query 141 ALEIEILAKLGL 152
L+ EIL GL
Sbjct 151 GLQEEILTAYGL 162
>Q54317 Endoribonuclease YbeY [Brachyspira hyodysenteriae]
Length=141
Score = 44.7 bits (104), Expect = 4e-10
Identities = 35/116 (30%), Positives = 54/116 (47%), Gaps = 19/116 (16%)
Query 39 DSEIGIACVDHEQSHRLNLEYRGKDKSTNVLSFPSDIPEEVLPLLDARPLGDLVICIPVV 98
D E+ + D E LN ++R KDK+T+VL+F P+ D GD+VI V
Sbjct 32 DGEVNLLFCDDEYIKNLNRQFRNKDKATDVLTF---------PMGDINEGGDIVISYEWV 82
Query 99 L----DEAIEQHKTAQAHFMHMLVHGTLHLLGYDHETSDEDAEEMEALEIEILAKL 150
+ DE I+ KT + +++H LHL G H + + E E+ K+
Sbjct 83 VTRYSDEKIK--KTV----LKLIIHSILHLKGIHHNYTRKSLMENNKKMKELYKKV 132
Score = 16.2 bits (30), Expect = 3.4
Identities = 6/15 (40%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
Query 123 HLLGYDHETSDEDAE 137
+ L Y +T+D D E
Sbjct 20 YFLYYSSKTADIDGE 34
Lambda K H a alpha
0.320 0.137 0.390 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 237375
Database: 9ca79691d6227937e54cb36abd97c2b2.TrEMBL.fasta
Posted date: May 30, 2024 5:22 PM
Number of letters in database: 2,424
Number of sequences in database: 15
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40