BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 404a804c30e12054ca0cc0d7473e4f15.SwissProt.fasta
           1 sequences; 180 total letters



Query= Z3508

Length=188
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P76471 Outer membrane protein YfaZ [Escherichia coli (strain K12)]    363     2e-135


>P76471 Outer membrane protein YfaZ [Escherichia coli (strain 
K12)]
Length=180

 Score = 363 bits (932),  Expect = 2e-135
 Identities = 178/180 (99%), Positives = 180/180 (100%), Gaps = 0/180 (0%)

Query  8    MKKIALAGLAGMLLVSASVNAMSISGQAGKEYTNIGVGFGTESTGLALSGNWTHNDDDGD  67
            MKKIALAGLAGMLLVSASVNAMSISGQAGKEYTNIGVGFGTE+TGLALSGNWTHNDDDGD
Sbjct  1    MKKIALAGLAGMLLVSASVNAMSISGQAGKEYTNIGVGFGTETTGLALSGNWTHNDDDGD  60

Query  68   VAGVGLGLNLPLGPLMATVGGKGVYTNPNYGDEGYAAAVGGGLQWKIGNSFRLFGEYYYS  127
            VAGVGLGLNLPLGPLMATVGGKGVYTNPNYGDEGYAAAVGGGLQWKIGNSFRLFGEYYYS
Sbjct  61   VAGVGLGLNLPLGPLMATVGGKGVYTNPNYGDEGYAAAVGGGLQWKIGNSFRLFGEYYYS  120

Query  128  PDSLSSGIKSYEEANAGARYTIMRPVSIEAGYRYLNLSGKDGNRDNAVADGPYVGVNASF  187
            PDSLSSGI+SYEEANAGARYTIMRPVSIEAGYRYLNLSGKDGNRDNAVADGPYVGVNASF
Sbjct  121  PDSLSSGIQSYEEANAGARYTIMRPVSIEAGYRYLNLSGKDGNRDNAVADGPYVGVNASF  180



Lambda      K        H        a         alpha
   0.316    0.138    0.411    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 27209


  Database: 404a804c30e12054ca0cc0d7473e4f15.SwissProt.fasta
    Posted date:  Jun 2, 2024  6:03 AM
  Number of letters in database: 180
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40