BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: c765614c47bcd03ef505142e761151fd.SwissProt.fasta
           4 sequences; 497 total letters



Query= Z4013

Length=120
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P15081 Glucitol operon activator protein [Escherichia coli (strai...  236     6e-87
P9WK51 Putative lipoprotein LprD [Mycobacterium tuberculosis (str...  32.0    1e-06
P9WK50 Putative lipoprotein LprD [Mycobacterium tuberculosis (str...  32.0    1e-06
P54134 Putative lipoprotein LprD [Mycobacterium leprae (strain TN)]   31.6    2e-06


>P15081 Glucitol operon activator protein [Escherichia coli (strain 
K12)]
Length=119

 Score = 236 bits (603),  Expect = 6e-87
 Identities = 118/119 (99%), Positives = 118/119 (99%), Gaps = 0/119 (0%)

Query  1    MVSALITVAVIAWCAQLALGGWQISRFNRAFDTLCQQGRVGVGRSSGRFKPRVVVAIALD  60
            MVSALITVAVIAWCAQLALGGWQISRFNRAFDTLCQQGRVGVGRSSGRFKPRVVVAIALD
Sbjct  1    MVSALITVAVIAWCAQLALGGWQISRFNRAFDTLCQQGRVGVGRSSGRFKPRVVVAIALD  60

Query  61   DQQRIADTLFMKGLTVFARPQKIPAITGMHAGDLQPDVIFPHDPLSQNALSLALKLKRG  119
            DQQRI DTLFMKGLTVFARPQKIPAITGMHAGDLQPDVIFPHDPLSQNALSLALKLKRG
Sbjct  61   DQQRIVDTLFMKGLTVFARPQKIPAITGMHAGDLQPDVIFPHDPLSQNALSLALKLKRG  119


>P9WK51 Putative lipoprotein LprD [Mycobacterium tuberculosis 
(strain ATCC 25618 / H37Rv)]
Length=126

 Score = 32.0 bits (71),  Expect = 1e-06
 Identities = 16/35 (46%), Positives = 19/35 (54%), Gaps = 0/35 (0%)

Query  4   ALITVAVIAWCAQLALGGWQISRFNRAFDTLCQQG  38
           ALI + +IA C  LALG WQ +RF     T    G
Sbjct  10  ALIALVIIATCGCLALGWWQWTRFQSTSGTFQNLG  44


>P9WK50 Putative lipoprotein LprD [Mycobacterium tuberculosis 
(strain CDC 1551 / Oshkosh)]
Length=126

 Score = 32.0 bits (71),  Expect = 1e-06
 Identities = 16/35 (46%), Positives = 19/35 (54%), Gaps = 0/35 (0%)

Query  4   ALITVAVIAWCAQLALGGWQISRFNRAFDTLCQQG  38
           ALI + +IA C  LALG WQ +RF     T    G
Sbjct  10  ALIALVIIATCGCLALGWWQWTRFQSTSGTFQNLG  44


>P54134 Putative lipoprotein LprD [Mycobacterium leprae (strain 
TN)]
Length=126

 Score = 31.6 bits (70),  Expect = 2e-06
 Identities = 16/35 (46%), Positives = 19/35 (54%), Gaps = 0/35 (0%)

Query  4   ALITVAVIAWCAQLALGGWQISRFNRAFDTLCQQG  38
           AL+ +  IA C  LALG WQ +RF  A  T    G
Sbjct  10  ALVALVTIAACGCLALGWWQWTRFQSASGTFQNLG  44



Lambda      K        H        a         alpha
   0.331    0.142    0.441    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 40082


  Database: c765614c47bcd03ef505142e761151fd.SwissProt.fasta
    Posted date:  Jun 2, 2024  2:24 AM
  Number of letters in database: 497
  Number of sequences in database:  4



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40