BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 019b39623e3acd9186f2f259ac9e4a06.SwissProt.fasta
           5 sequences; 1,676 total letters



Query= Z2827

Length=168
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P64483 Multifunctional Ser/Thr-tRNA deacylase ProXp-y [Escherichi...  326     3e-120
P64484 Multifunctional Ser/Thr-tRNA deacylase ProXp-y [Escherichi...  326     3e-120
A8AZA7 Proline--tRNA ligase [Streptococcus gordonii (strain Chall...  38.1    2e-07 
Q3AB89 Proline--tRNA ligase [Carboxydothermus hydrogenoformans (s...  35.8    1e-06 


>P64483 Multifunctional Ser/Thr-tRNA deacylase ProXp-y [Escherichia 
coli (strain K12)]
Length=167

 Score = 326 bits (835),  Expect = 3e-120
 Identities = 167/167 (100%), Positives = 167/167 (100%), Gaps = 0/167 (0%)

Query  1    MTEMAKGSVTHQRLIALLSQEGADFRVVTHEAVGKCEAVSEIRGTALGQGAKALVCKVKG  60
            MTEMAKGSVTHQRLIALLSQEGADFRVVTHEAVGKCEAVSEIRGTALGQGAKALVCKVKG
Sbjct  1    MTEMAKGSVTHQRLIALLSQEGADFRVVTHEAVGKCEAVSEIRGTALGQGAKALVCKVKG  60

Query  61   NGVNQHVLAILAADQQADLSQLASHIGGLRASLASPAEVDELTGCVFGAIPPFSFHPKLK  120
            NGVNQHVLAILAADQQADLSQLASHIGGLRASLASPAEVDELTGCVFGAIPPFSFHPKLK
Sbjct  61   NGVNQHVLAILAADQQADLSQLASHIGGLRASLASPAEVDELTGCVFGAIPPFSFHPKLK  120

Query  121  LVADPLLFERFDEIAFNAGMLDKSVILKTADYLRIAQPELVNFRRTA  167
            LVADPLLFERFDEIAFNAGMLDKSVILKTADYLRIAQPELVNFRRTA
Sbjct  121  LVADPLLFERFDEIAFNAGMLDKSVILKTADYLRIAQPELVNFRRTA  167


>P64484 Multifunctional Ser/Thr-tRNA deacylase ProXp-y [Escherichia 
coli O157:H7]
Length=167

 Score = 326 bits (835),  Expect = 3e-120
 Identities = 167/167 (100%), Positives = 167/167 (100%), Gaps = 0/167 (0%)

Query  1    MTEMAKGSVTHQRLIALLSQEGADFRVVTHEAVGKCEAVSEIRGTALGQGAKALVCKVKG  60
            MTEMAKGSVTHQRLIALLSQEGADFRVVTHEAVGKCEAVSEIRGTALGQGAKALVCKVKG
Sbjct  1    MTEMAKGSVTHQRLIALLSQEGADFRVVTHEAVGKCEAVSEIRGTALGQGAKALVCKVKG  60

Query  61   NGVNQHVLAILAADQQADLSQLASHIGGLRASLASPAEVDELTGCVFGAIPPFSFHPKLK  120
            NGVNQHVLAILAADQQADLSQLASHIGGLRASLASPAEVDELTGCVFGAIPPFSFHPKLK
Sbjct  61   NGVNQHVLAILAADQQADLSQLASHIGGLRASLASPAEVDELTGCVFGAIPPFSFHPKLK  120

Query  121  LVADPLLFERFDEIAFNAGMLDKSVILKTADYLRIAQPELVNFRRTA  167
            LVADPLLFERFDEIAFNAGMLDKSVILKTADYLRIAQPELVNFRRTA
Sbjct  121  LVADPLLFERFDEIAFNAGMLDKSVILKTADYLRIAQPELVNFRRTA  167


>A8AZA7 Proline--tRNA ligase [Streptococcus gordonii (strain Challis 
/ ATCC 35105 / BCRC 15272 / CH1 / DL1 / V288)]
Length=616

 Score = 38.1 bits (87),  Expect = 2e-07
 Identities = 19/58 (33%), Positives = 34/58 (59%), Gaps = 0/58 (0%)

Query  67   VLAILAADQQADLSQLASHIGGLRASLASPAEVDELTGCVFGAIPPFSFHPKLKLVAD  124
            V+A+L  + Q +  +L +H+G      A+ AEV EL G  FG++ P +   ++ ++AD
Sbjct  328  VVALLVGNDQLNEVKLKNHLGADFFEAATEAEVQELFGANFGSLGPVNLPEEVTIIAD  385


 Score = 17.3 bits (33),  Expect = 1.3
 Identities = 9/19 (47%), Positives = 13/19 (68%), Gaps = 1/19 (5%)

Query  14   LIALLSQEGADFRV-VTHE  31
            L  L ++EG+DF +  THE
Sbjct  93   LFKLKNREGSDFILGPTHE  111


 Score = 15.8 bits (29),  Expect = 4.0
 Identities = 11/27 (41%), Positives = 14/27 (52%), Gaps = 3/27 (11%)

Query  140  MLDKSVILK---TADYLRIAQPELVNF  163
            +LDKSV       AD L   + EL N+
Sbjct  225  VLDKSVASLDEIPADVLEAIKAELSNW  251


>Q3AB89 Proline--tRNA ligase [Carboxydothermus hydrogenoformans 
(strain ATCC BAA-161 / DSM 6008 / Z-2901)]
Length=569

 Score = 35.8 bits (81),  Expect = 1e-06
 Identities = 18/59 (31%), Positives = 36/59 (61%), Gaps = 2/59 (3%)

Query  66   HVLAILAADQQADLSQLASHIGGLRASLASPAEVDELTGCVFGAIPPFSFHPKLKLVAD  124
            +VLA++  D++ +  ++ + +  L   LASP EV+E+ G  +G+I P   +  + ++AD
Sbjct  290  YVLAVVRGDREVNEVKVKNQVDCLVLELASPQEVEEVLGAEYGSIGPVGVN--IPVIAD  346



Lambda      K        H        a         alpha
   0.324    0.137    0.394    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 201804


  Database: 019b39623e3acd9186f2f259ac9e4a06.SwissProt.fasta
    Posted date:  Jun 2, 2024  5:40 AM
  Number of letters in database: 1,676
  Number of sequences in database:  5



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40