BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: a397cd4af07c1044d37da0fd139794f6.SwissProt.fasta
           1 sequences; 119 total letters



Query= Z2180

Length=120
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P76148 Uncharacterized protein YneG [Escherichia coli (strain K12)]   247     1e-91


>P76148 Uncharacterized protein YneG [Escherichia coli (strain 
K12)]
Length=119

 Score = 247 bits (630),  Expect = 1e-91
 Identities = 118/119 (99%), Positives = 118/119 (99%), Gaps = 0/119 (0%)

Query  1    MQSLDPLFARLSRSKFRSRFRLGMKERQYCLEKGAPVIEQHAADFVAKRLAPALPANDGK  60
            MQSLDPLFARLSRSKFRSRFRLGMKERQYCLEKGAPVIEQHAADFVAKRLAPALPANDGK
Sbjct  1    MQSLDPLFARLSRSKFRSRFRLGMKERQYCLEKGAPVIEQHAADFVAKRLAPALPANDGK  60

Query  61   QTPMRGHPVFIAQHATATCCRGCLAKWHNIPHGVSLSEEQQRYIVAVIYHWLVVQMNQP  119
            QTPMRGHPVFIAQHATATCCRGCLAKWHNIP GVSLSEEQQRYIVAVIYHWLVVQMNQP
Sbjct  61   QTPMRGHPVFIAQHATATCCRGCLAKWHNIPQGVSLSEEQQRYIVAVIYHWLVVQMNQP  119



Lambda      K        H        a         alpha
   0.330    0.138    0.452    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 11342


  Database: a397cd4af07c1044d37da0fd139794f6.SwissProt.fasta
    Posted date:  Jun 2, 2024  5:59 AM
  Number of letters in database: 119
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40