BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 10f7c2a1c6d2c43fa651a2c1d5362d24.TrEMBL.fasta
           4 sequences; 484 total letters



Query= Z5855

Length=154
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

A0A192CGJ0 Aspartate carbamoyltransferase regulatory chain [Esche...  306     2e-113
Q9RMS7 Aspartate carbamoyltransferase regulatory chain [Enterobac...  252     4e-92 
D0VWV9 Aspartate carbamoyltransferase regulatory chain [Moritella...  174     2e-61 
Q38270 Mutant truncated regulatory protein (pyrI) gene from E.col...  43.1    3e-11 


>A0A192CGJ0 Aspartate carbamoyltransferase regulatory chain [Escherichia 
coli O25b:H4]
Length=153

 Score = 306 bits (784),  Expect = 2e-113
 Identities = 153/153 (100%), Positives = 153/153 (100%), Gaps = 0/153 (0%)

Query  1    MTHDNKLQVEAIKRGTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIK  60
            MTHDNKLQVEAIKRGTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIK
Sbjct  1    MTHDNKLQVEAIKRGTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIK  60

Query  61   IENTFLSEDQVDQLALYAPQATVNRIDNYEVVGKSRPSLPERIDNVLVCPNSNCISHAEP  120
            IENTFLSEDQVDQLALYAPQATVNRIDNYEVVGKSRPSLPERIDNVLVCPNSNCISHAEP
Sbjct  61   IENTFLSEDQVDQLALYAPQATVNRIDNYEVVGKSRPSLPERIDNVLVCPNSNCISHAEP  120

Query  121  VSSSFAVRKRANDIALKCKYCEKEFSHNVVLAN  153
            VSSSFAVRKRANDIALKCKYCEKEFSHNVVLAN
Sbjct  121  VSSSFAVRKRANDIALKCKYCEKEFSHNVVLAN  153


>Q9RMS7 Aspartate carbamoyltransferase regulatory chain [Enterobacter 
agglomerans]
Length=154

 Score = 252 bits (644),  Expect = 4e-92
 Identities = 122/153 (80%), Positives = 140/153 (92%), Gaps = 0/153 (0%)

Query  1    MTHDNKLQVEAIKRGTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIK  60
            MT DNKLQVEAIKRGTVIDHIPAQIGFKLLSLF+LTETDQRITIGLNLPSGEMGRKDLIK
Sbjct  1    MTQDNKLQVEAIKRGTVIDHIPAQIGFKLLSLFRLTETDQRITIGLNLPSGEMGRKDLIK  60

Query  61   IENTFLSEDQVDQLALYAPQATVNRIDNYEVVGKSRPSLPERIDNVLVCPNSNCISHAEP  120
            IENTFL++DQV+QLA+YAP ATVNRID+YEVV K  P+LP+ ++ VL CPNSNCIS +EP
Sbjct  61   IENTFLTDDQVNQLAVYAPHATVNRIDDYEVVAKIAPTLPDHVERVLTCPNSNCISRSEP  120

Query  121  VSSSFAVRKRANDIALKCKYCEKEFSHNVVLAN  153
            V SSFAV++RA+D+ LKCKYCEKEF+ +VVL +
Sbjct  121  VFSSFAVKQRADDVHLKCKYCEKEFARHVVLGH  153


>D0VWV9 Aspartate carbamoyltransferase regulatory chain [Moritella 
profunda]
Length=153

 Score = 174 bits (442),  Expect = 2e-61
 Identities = 81/147 (55%), Positives = 110/147 (75%), Gaps = 0/147 (0%)

Query  4    DNKLQVEAIKRGTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIEN  63
            +N +QVEAI  G VIDHIP+  G K+L LF LT+T QR+T+G NLP+ +   KDLIK+EN
Sbjct  3    NNHMQVEAICNGYVIDHIPSGQGVKILKLFSLTDTKQRVTVGFNLPTKDGNAKDLIKVEN  62

Query  64   TFLSEDQVDQLALYAPQATVNRIDNYEVVGKSRPSLPERIDNVLVCPNSNCISHAEPVSS  123
            T +++ Q +QLAL AP AT+N I+N++V  K   +LP  ++NV  CPNSNCI+H EPV+S
Sbjct  63   TEITKSQANQLALLAPNATINIIENFKVTDKHSLTLPNEVENVFPCPNSNCITHGEPVTS  122

Query  124  SFAVRKRANDIALKCKYCEKEFSHNVV  150
            SF+++K   +I LKCKYCEK FS ++V
Sbjct  123  SFSIKKTKGNIGLKCKYCEKTFSKDIV  149


>Q38270 Mutant truncated regulatory protein (pyrI) gene from E.coli, 
3' end [Lambdavirus lambda]
Length=24

 Score = 43.1 bits (100),  Expect = 3e-11
 Identities = 19/24 (79%), Positives = 20/24 (83%), Gaps = 0/24 (0%)

Query  128  RKRANDIALKCKYCEKEFSHNVVL  151
            RKRANDIALKCKYCEKEF   + L
Sbjct  1    RKRANDIALKCKYCEKEFYTKLAL  24



Lambda      K        H        a         alpha
   0.322    0.137    0.395    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 50440


  Database: 10f7c2a1c6d2c43fa651a2c1d5362d24.TrEMBL.fasta
    Posted date:  Jun 2, 2024  4:02 AM
  Number of letters in database: 484
  Number of sequences in database:  4



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40