Prior-Knowledge | Description | Expectation | Prediction | Conclusion | Leaf Statistics |
---|---|---|---|---|---|
Component_46773 | RfaE bifunc, domain II | None - {{∅}} | True - {{t}} | Unconfirmed presence | |
Evidence_59175 | TIGR02198 HMM | None - {{∅}} | False - {{f}} | Unconfirmed absence | |
Component_46771 | heptosyltransferase III | None - {{∅}} | False - {{f}} | Unconfirmed absence | |
Evidence_84990 | TIGR00213 HMM | None - {{∅}} | False - {{f}} | Unconfirmed absence | |
Component_63297 | lipopolysaccharide core biosynthesis protein RfaY | None - {{∅}} | False - {{f}} | Unconfirmed absence | |
Evidence_85829 | TIGR04437 HMM | None - {{∅}} | False - {{f}} | Unconfirmed absence | |
Component_46770 | heptosyltransferase II | None - {{∅}} | False - {{f}} | Unconfirmed absence | |
Evidence_59177 | TIGR02201 HMM | None - {{∅}} | False - {{f}} | Unconfirmed absence | |
Component_46772 | RfaE bifunc, domain I | None - {{∅}} | False - {{f}} | Unconfirmed absence | |
Evidence_84991 | PF06293 HMM | None - {{∅}} | False - {{f}} | Unconfirmed absence | |
Component_63294 | D-sedoheptulose 7-phosphate isomerase | None - {{∅}} | False - {{f}} | Unconfirmed absence | |
Component_63296 | lipopolysaccharide core biosynthesis protein RfaP | None - {{∅}} | False - {{f}} | Unconfirmed absence | |
Evidence_59176 | TIGR02199 HMM | None - {{∅}} | True - {{t}} | Unconfirmed presence | |
Component_63295 | D,D-heptose 1,7-bisphosphate phosphatase | None - {{∅}} | False - {{f}} | Unconfirmed absence | |
Evidence_59174 | TIGR02195 HMM | None - {{∅}} | False - {{f}} | Unconfirmed absence | |
Component_64054 | Kdo-III transferase | None - {{∅}} | False - {{f}} | Unconfirmed absence | |
Evidence_84992 | PF06176 HMM | None - {{∅}} | False - {{f}} | Unconfirmed absence | |
Component_46769 | heptosyltransferase I | None - {{∅}} | False - {{f}} | Unconfirmed absence | |
Evidence_59172 | TIGR02197 HMM | None - {{∅}} | False - {{f}} | Unconfirmed absence | |
Component_46768 | ADP-L-glycero-D-mannoheptose-6-epimerase | None - {{∅}} | False - {{f}} | Unconfirmed absence | |
Evidence_84989 | TIGR00441 HMM | None - {{∅}} | False - {{f}} | Unconfirmed absence | |
GenProp0203 | LPS inner core biosynthesis, ketodeoxyoctonate and heptose type~Lipopolysaccharide (LPS) occurs broadly in Gram-negative bacterial outer membrane. Three parts are termed lipid A, the oligosaccharide core, and O antigen. If lacking the repeating O-antigen, it may be termed Lipooligosaccharide (LOS). The core is often described as having inner and outer regions, and is variable among species that contain LPS/LOS. This property describes a widely distributed common chemistry for the inner core. At least two residues of 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) are present, to one of which the lipid A moeity is attached. The inner core in E. coli and many other bacteria also contains at least two heptose residues, added by distinct heptosyltransferases I and II. | None - {{∅}} | Both - {{t},{f}} | Unconfirmed contradictory | |
Evidence_59173 | TIGR02193 HMM | None - {{∅}} | False - {{f}} | Unconfirmed absence |