| Prior-Knowledge | Description | Expectation | Prediction | Conclusion | Leaf Statistics |
|---|---|---|---|---|---|
| Evidence_123 | TIGR01801 HMM | True - {{t}} | False - {{f}} | Unexpected absence | |
| Evidence_115 | TIGR01795 HMM | True - {{t}} | False - {{f}} | Unexpected absence | |
| Evidence_127 | TIGR01805 HMM | True - {{t}} | False - {{f}} | Unexpected absence | |
| Evidence_113 | TIGR01791 HMM | True - {{t}} | False - {{f}} | Unexpected absence | |
| Evidence_135 | PF00800 HMM | True - {{t}} | True - {{t}} | Confirmed presence | |
| Evidence_131 | TIGR01807 HMM | True - {{t}} | False - {{f}} | Unexpected absence | |
| Component_157 | prephenate dehydratase | True - {{t}} | True - {{t}} | Confirmed presence | |
| Evidence_117 | TIGR01796 HMM | True - {{t}} | False - {{f}} | Unexpected absence | |
| Evidence_133 | TIGR01808 HMM | True - {{t}} | False - {{f}} | Unexpected absence | |
| GenProp0039 | phenylalanine biosynthesis from chorismate~The aromatic amino acid phenylalanine is synthesized via a three step pathway from chorismate. The first two steps, isomerization of chorismate to prephenate and dehydration of prephenate to phenylpyruvate are modelled by specific HMMs. The third step, transamination of phenylpyruvate to form phenylalanine has not been ascribed to a specific transaminase in non-mammals. The YES state for this pathway is therefore indicative of the presence of the two characterized steps. | True - {{t}} | Both - {{t},{f}} | Contradictory absence | |
| Component_155 | chorismate mutase | True - {{t}} | False - {{f}} | Unexpected absence | |
| Evidence_129 | TIGR01806 HMM | True - {{t}} | False - {{f}} | Unexpected absence | |
| Evidence_119 | TIGR01797 HMM | True - {{t}} | False - {{f}} | Unexpected absence | |
| Evidence_121 | TIGR01799 HMM | True - {{t}} | False - {{f}} | Unexpected absence | |
| Evidence_125 | TIGR01802 HMM | True - {{t}} | False - {{f}} | Unexpected absence |