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Prior-Knowledge Description Expectation Prediction Conclusion Leaf Statistics
UCR00475 O(2) + glycolate = H(2)O(2) + glyoxylate None - {{∅}} None - {{∅}} Unexplained
UPA00951 photorespiration~Photorespiration involves three organelles: the chloroplast, the peroxisome, and the mitochondria. At conditions of low CO2 concentration and high O2 concentration, ribulose bisphosphate is oxidized to 3-phosphoglycerate and 2-phosphoglycolate. The two-carbon molecule, 2-phosphoglycolate is converted to glycine. The decarboxylation of two glycines generates serine, CO2 and NH3. Serine is further converted to 3-phosphoglycerate. 3-phosphoglycerate generated from photorespiration re-enters the CO2 fixation Calvin cycle. NH3 is re-fixed by glutamine synthetase. The outcome of photorespiration is loss of CO2 and energy in photosynthetic cells. The biological function of photorespiration is not clear. One possibility is that photorespiration is necessary under conditions of high light intensity and low CO2 concentration (i.e. when stomata is closed under water stress) to dissipate excess ATP and reducing power from the photosynthesis light reactions, thus to prevent damage to the photosynthetic apparatus. [MetaCyc]. None - {{∅}} None - {{∅},{t}} Unexplained
UCR00372 2-oxoglutarate + glycine = L-glutamate + glyoxylate None - {{∅}} None - {{∅}} Unexplained
UCR01388 D-glycerate + NAD(+) = 3-hydroxypyruvate + H(+) + NADH None - {{∅}} None - {{∅}} Unexplained
MUER18 Meta-UER 18~1 2-phosphoglycolate + 1 H(2)O => 1 glycolate + 1 phosphate. None - {{∅}} True - {{t}} Unconfirmed presence
UCR00945 5,10-methylene-THF + H(2)O + glycine = 5,6,7,8-tetrahydrofolate + L-serine True - {{t}} True - {{t}} Confirmed presence
UCR01514 ATP + D-glycerate = 3-phospho-D-glycerate + ADP Both - {{t},{f}} True - {{t}} Ambiguous presence
UER00914 3-phospho-D-glycerate from glycine: step 1/4~1 5,10-methylene-THF + 1 H(2)O + 1 glycine => 1 5,6,7,8-tetrahydrofolate + 1 L-serine. True - {{t}} True - {{t}} Confirmed presence
UER00913 glycine from 2-phosphoglycolate: step 3/3~1 L-glutamate + 1 glyoxylate => 1 2-oxoglutarate + 1 glycine. None - {{∅}} None - {{∅}} Unexplained
UER00915 3-phospho-D-glycerate from glycine: step 2/4~1 L-serine + 1 pyruvate => 1 3-hydroxypyruvate + 1 L-alanine. None - {{∅}} None - {{∅}} Unexplained
UER00916 3-phospho-D-glycerate from glycine: step 3/4~1 3-hydroxypyruvate + 1 H(+) + 1 NADH => 1 D-glycerate + 1 NAD(+). None - {{∅}} None - {{∅}} Unexplained
UER00912 glycine from 2-phosphoglycolate: step 2/3~1 O(2) + 1 glycolate => 1 H(2)O(2) + 1 glyoxylate. None - {{∅}} None - {{∅}} Unexplained
MUER4 Meta-UER 4~1 ATP + 1 D-glycerate => 1 3-phospho-D-glycerate + 1 ADP. Both - {{t},{f}} True - {{t}} Ambiguous presence
UCR00585 L-serine + pyruvate = 3-hydroxypyruvate + L-alanine None - {{∅}} None - {{∅}} Unexplained
UCR01334 2-phosphoglycolate + H(2)O = glycolate + phosphate True - {{t}} True - {{t}} Confirmed presence
ULS00452 3-phospho-D-glycerate from glycine None - {{∅}} None - {{∅},{t}} Unexplained
ULS00451 glycine from 2-phosphoglycolate None - {{∅}} None - {{∅},{t}} Unexplained