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Prior-Knowledge Description Expectation Prediction Conclusion Leaf Statistics
UPA00146 L-arabinose degradation via L-arabinitol~Degradation of L-arabinose via L-arabinitol pathway. The fungal L-arabinose catabolic pathway consists of aldose reductase (EC 1.1.1.21), L-arabinitol 4-dehydrogenase (EC 1.1.1.12), L-xylulose reductase (EC 1.1.1.10), D-xylulose reductase (EC 1.1.1.9), and xylulokinase (EC 2.7.1.17) which convert L-arabinose to D-xylulose 5-phosphate. . None - {{∅}} None - {{∅},{t}} Unexplained
MUER15 Meta-UER 15~1 L-ribulose 5-phosphate => 1 D-xylulose 5-phosphate. True - {{t}} True - {{t}} Confirmed presence
UER00571 glycolaldehyde and pyruvate from 2-dehydro-3-deoxy-L-arabinonate: step 1/1~1 2-dehydro-3-deoxy-L-arabinonate => 1 glycolaldehyde + 1 pyruvate. None - {{∅}} None - {{∅}} Unexplained
UER00575 D-xylulose 5-phosphate from L-arabinose (fungal route): step 2/5~1 L-arabinitol + 1 NAD(+) => 1 H(+) + 1 L-xylulose + 1 NADH. None - {{∅}} None - {{∅}} Unexplained
UCR01758 L-arabinitol + NAD(+) = H(+) + L-arabinose + NADH None - {{∅}} None - {{∅}} Unexplained
VariantPath-2-UER00574 None - {{∅}} None - {{∅}} Unexplained
UER00569 2-dehydro-3-deoxy-L-arabinonate from L-arabinose: step 2/3~1 H(2)O + 1 L-arabinono-1,4-lactone => 1 L-arabinonate. None - {{∅}} None - {{∅}} Unexplained
UCR02439 ATP + L-ribulose = ADP + L-ribulose 5-phosphate True - {{t}} True - {{t}} Confirmed presence
UCR01757 L-arabinose + NAD(+) = H(+) + L-arabinono-1,4-lactone + NADH None - {{∅}} None - {{∅}} Unexplained
VariantPath-2-UPA00141 None - {{∅}} None - {{∅},{t}} Unexplained
UER00570 2-dehydro-3-deoxy-L-arabinonate from L-arabinose: step 3/3~1 L-arabinonate => 1 2-dehydro-3-deoxy-L-arabinonate + 1 H(2)O. None - {{∅}} None - {{∅}} Unexplained
VariantPath-1-UPA00141 None - {{∅}} None - {{∅}} Unexplained
VariantPath-1-UER00574 None - {{∅}} None - {{∅}} Unexplained
UPA00141 L-arabinose degradation via L-arabinono-1,4-lactone pathway~Degradation of L-arabinose via L-arabinono-1,4-lactone pathway. In this catabolic pathway, L-arabinose is oxidized to L-arabino-gamma-lactone (L-arabinono-1,4-lactone) by a NAD(P)+-dependent dehydrogenase. The lactone is cleaved by a lactonase to L-arabonate, followed by two successive dehydration reactions forming L-2-keto-3-deoxyarabonate (L-KDA)2 and alpha-ketoglutaric semialdehyde(alpha-KGSA). The last step is the NAD(P)+-dependent dehydrogenation of alpha-KGSA to alpha-ketoglutaric acid (referred to as the first pathway). Alternatively, L-KDA is cleaved through an aldolase reaction to glycolaldehyde and pyruvate (referred to as the second pathway). . None - {{∅}} None - {{∅},{t}} Unexplained
ULS00270 D-xylulose 5-phosphate from L-arabinose (fungal route) None - {{∅}} None - {{∅},{t}} Unexplained
UPA00463 L-arabinose degradation~Degradation of L-arabinose Degradation of L-arabinose, a major constituent of plant material. Bacteria and fungi can utilize this pentose sugar via different pathways. Two distinct pathways convert L-arabinose to D-xylulose 5-phosphate via L-ribulose (in bacteria) or via L-arabitol (in fungal). An additional pathway has been recently discovered in bacteria (A. brasiliense, H. seropedicae, P. saccharophila, S. meliloti). In this pathway, L-arabinose is oxidized to L-arabino-gamma-lactone. True - {{t}} True - {{t}} Confirmed presence
UER00566 D-xylulose 5-phosphate from L-arabinose (bacterial route): step 2/3~1 ATP + 1 L-ribulose => 1 ADP + 1 L-ribulose 5-phosphate. True - {{t}} True - {{t}} Confirmed presence
ULS00267 2-dehydro-3-deoxy-L-arabinonate from L-arabinose None - {{∅}} None - {{∅}} Unexplained
UCR01903 L-arabinitol + NAD(+) = H(+) + L-xylulose + NADH None - {{∅}} None - {{∅}} Unexplained
UCR00264 2,5-dioxopentanoate + H(2)O + NADP(+) = 2-oxoglutarate + H(+) + NADPH True - {{t}} True - {{t}} Confirmed presence
UER00970 None~1 H(+) + 1 L-arabinose + 1 NADPH => 1 L-arabinitol + 1 NADP(+). None - {{∅}} None - {{∅}} Unexplained
UER00572 2-oxoglutarate from 2-dehydro-3-deoxy-L-arabinonate: step 1/2~1 2-dehydro-3-deoxy-L-arabinonate => 1 2,5-dioxopentanoate + 1 H(2)O. None - {{∅}} None - {{∅}} Unexplained
UER00576 D-xylulose 5-phosphate from L-arabinose (fungal route): step 3/5~1 H(+) + 1 L-xylulose + 1 NADPH => 1 NADP(+) + 1 xylitol. None - {{∅}} None - {{∅}} Unexplained
UER00578 D-xylulose 5-phosphate from L-arabinose (fungal route): step 5/5~1 ATP + 1 D-xylulose => 1 ADP + 1 D-xylulose 5-phosphate. True - {{t}} True - {{t}} Confirmed presence
UCR02278 2-dehydro-3-deoxy-L-arabinonate = 2,5-dioxopentanoate + H(2)O None - {{∅}} None - {{∅}} Unexplained
UCR01896 NAD(+) + xylitol = D-xylulose + H(+) + NADH None - {{∅}} None - {{∅}} Unexplained
UER00577 D-xylulose 5-phosphate from L-arabinose (fungal route): step 4/5~1 NAD(+) + 1 xylitol => 1 D-xylulose + 1 H(+) + 1 NADH. None - {{∅}} None - {{∅}} Unexplained
UCR01761 L-arabinose = L-ribulose True - {{t}} True - {{t}} Confirmed presence
ULS00049 D-xylulose 5-phosphate from L-arabinose (bacterial route) True - {{∅},{t}} True - {{t}} Confirmed presence
UER00565 D-xylulose 5-phosphate from L-arabinose (bacterial route): step 1/3~1 L-arabinose => 1 L-ribulose. True - {{t}} True - {{t}} Confirmed presence
UCR05850 L-ribulose 5-phosphate = D-xylulose 5-phosphate True - {{t}} True - {{t}} Confirmed presence
UCR02522 L-arabinonate = 2-dehydro-3-deoxy-L-arabinonate + H(2)O None - {{∅}} None - {{∅}} Unexplained
ULS00269 2-oxoglutarate from 2-dehydro-3-deoxy-L-arabinonate None - {{∅}} None - {{∅},{t}} Unexplained
UCR01904 NADP(+) + xylitol = H(+) + L-xylulose + NADPH None - {{∅}} None - {{∅}} Unexplained
UER00969 None~1 H(+) + 1 L-arabinose + 1 NADH => 1 L-arabinitol + 1 NAD(+). None - {{∅}} None - {{∅}} Unexplained
UER00573 2-oxoglutarate from 2-dehydro-3-deoxy-L-arabinonate: step 2/2~1 2,5-dioxopentanoate + 1 H(2)O + 1 NADP(+) => 1 2-oxoglutarate + 1 H(+) + 1 NADPH. True - {{t}} True - {{t}} Confirmed presence
UPA00145 L-arabinose degradation via L-ribulose~Degradation of L-arabinose via L-ribulose pathway. The bacterial L-arabinose catabolic pathway consists of L-arabinose isomerase (EC 5.3.1.4), ribulokinase (EC 2.7.1.16), and L-ribulose phosphate 4-epimerase (EC 5.1.3.4) which convert L-arabinose to D-xylulose 5-phosphate. The pathway and the genes of this pathway are well-established. True - {{∅},{t}} True - {{t}} Confirmed presence
UER00568 2-dehydro-3-deoxy-L-arabinonate from L-arabinose: step 1/3~1 L-arabinose + 1 NAD(+) => 1 H(+) + 1 L-arabinono-1,4-lactone + 1 NADH. None - {{∅}} None - {{∅}} Unexplained
UCR01784 2-dehydro-3-deoxy-L-arabinonate = glycolaldehyde + pyruvate None - {{∅}} None - {{∅}} Unexplained
UER00574 D-xylulose 5-phosphate from L-arabinose (fungal route): step 1/5~H(+) + L-arabinose + [NADH or NADPH] => L-arabinitol + [NAD(+) or NADP(+)]. None - {{∅}} None - {{∅}} Unexplained
UCR01759 L-arabinitol + NADP(+) = H(+) + L-arabinose + NADPH None - {{∅}} None - {{∅}} Unexplained
UCR02526 H(2)O + L-arabinono-1,4-lactone = L-arabinonate None - {{∅}} None - {{∅}} Unexplained
UCR01639 ATP + D-xylulose = ADP + D-xylulose 5-phosphate True - {{t}} True - {{t}} Confirmed presence
ULS00268 glycolaldehyde and pyruvate from 2-dehydro-3-deoxy-L-arabinonate None - {{∅}} None - {{∅}} Unexplained