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Prior-Knowledge Description Expectation Prediction Conclusion Leaf Statistics
VariantPath-2-UER00148 True - {{t}} True - {{t}} Confirmed presence
UCR05661 2-deoxy-5-keto-D-gluconic acid + ATP = 6-phospho-5-dehydro-2-deoxy-D-gluconic acid + ADP True - {{t}} True - {{t}} Confirmed presence
UER00146 acetyl-CoA from myo-inositol: step 5/7~1 2-deoxy-5-keto-D-gluconic acid + 1 ATP => 1 6-phospho-5-dehydro-2-deoxy-D-gluconic acid + 1 ADP. True - {{t}} True - {{t}} Confirmed presence
UPA00076 myo-inositol degradation into acetyl-CoA~Degradation of myo-inositol, an abundant compound in soil. Myo-Inositol is also common and essential in plants. Several micro-organisms, including model organism Bacillus subtilis (PMID:9226270), can grow on inositol as the carbon source. It was thought that bacterial inositol catabolism is only required for efficient utilization of this compound. However, the inositol dehydrogenase of Sinorhizobium fredii not only catalyses the initial reaction step of inositol catabolism but also is involved in nitrogen fixation and competitiveness to nodulate soybeans (PMID:11274120). Furthermore, MocA and MocC of Sinorhizobium meliloti which participate in degradation of rhizopine (L-3-O-methyl-scyllo-inosamine), a symbiosis- specific compound found in alfalfa nodules, exhibited significant similarities to IolG and IolE involved in inositol catabolism of B. subtilis, respectively (PMID:9226270), and the inositol catabolism pathway was tightly linked with rhizopine utilization in S. meliloti (PMID:9802033). These facts implied an interesting relationship between bacterial inositol catabolism and plant/bacteria symbiosis for nitrogen fixation. True - {{t}} None - {{∅},{t}} Missing
UCR01183 NAD(+) + myo-inositol = H(+) + NADH + scyllo-inosose True - {{t}} True - {{t}} Confirmed presence
UCR08503 5-deoxy-D-glucuronic acid = 2-deoxy-5-keto-D-gluconic acid True - {{t}} None - {{∅}} Missing
UCR00706 3-oxopropanoate + CoA + NADP(+) = CO(2) + H(+) + NADPH + acetyl-CoA None - {{∅}} None - {{∅}} Unexplained
UCR05378 6-phospho-5-dehydro-2-deoxy-D-gluconic acid = 3-oxopropanoate + glycerone phosphate True - {{t}} True - {{t}} Confirmed presence
VariantPath-1-UER00148 None - {{∅}} None - {{∅}} Unexplained
UER00144 acetyl-CoA from myo-inositol: step 2/7~1 scyllo-inosose => 1 3D-3,5/4-trihydroxycyclohexane-1,2-dione + 1 H(2)O. True - {{t}} True - {{t}} Confirmed presence
UCR00705 3-oxopropanoate + CoA + NAD(+) = CO(2) + H(+) + NADH + acetyl-CoA True - {{t}} True - {{t}} Confirmed presence
UCR08603 3D-3,5/4-trihydroxycyclohexane-1,2-dione + H(2)O = 5-deoxy-D-glucuronic acid True - {{t}} None - {{∅}} Missing
UCR02782 scyllo-inosose = 3D-3,5/4-trihydroxycyclohexane-1,2-dione + H(2)O True - {{t}} True - {{t}} Confirmed presence
UER00951 None~1 3-oxopropanoate + 1 CoA + 1 NAD(+) => 1 CO(2) + 1 H(+) + 1 NADH + 1 acetyl-CoA. True - {{t}} True - {{t}} Confirmed presence
UER00952 None~1 3-oxopropanoate + 1 CoA + 1 NADP(+) => 1 CO(2) + 1 H(+) + 1 NADPH + 1 acetyl-CoA. None - {{∅}} None - {{∅}} Unexplained
ULS00061 acetyl-CoA from myo-inositol True - {{t}} None - {{∅},{t}} Missing
UER00920 acetyl-CoA from myo-inositol: step 4/7~1 5-deoxy-D-glucuronic acid => 1 2-deoxy-5-keto-D-gluconic acid. True - {{t}} None - {{∅}} Missing
UER00147 acetyl-CoA from myo-inositol: step 6/7~1 6-phospho-5-dehydro-2-deoxy-D-gluconic acid => 1 3-oxopropanoate + 1 glycerone phosphate. True - {{t}} True - {{t}} Confirmed presence
UER00148 acetyl-CoA from myo-inositol: step 7/7~3-oxopropanoate + CoA + [NAD(+) or NADP(+)] => CO(2) + H(+) + acetyl-CoA + [NADH or NADPH]. True - {{t}} True - {{t}} Confirmed presence
UER00143 acetyl-CoA from myo-inositol: step 1/7~1 NAD(+) + 1 myo-inositol => 1 H(+) + 1 NADH + 1 scyllo-inosose. True - {{t}} True - {{t}} Confirmed presence
UER00145 acetyl-CoA from myo-inositol: step 3/7~1 3D-3,5/4-trihydroxycyclohexane-1,2-dione + 1 H(2)O => 1 5-deoxy-D-glucuronic acid. True - {{t}} None - {{∅}} Missing