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Prior-Knowledge Description Expectation Prediction Conclusion Leaf Statistics
Evidence_75135 TIGR03254 HMM False - {{f}} None - {{∅}} Absent
Component_63782 decarboxylation None - {{∅}} None - {{∅}} Unexplained
Component_63781 oxalate/formate antiporter None - {{∅}} None - {{∅}} Unexplained
Component_54195 formyl-CoA transferase False - {{f}} None - {{∅}} Absent
Evidence_85507 TIGR04259 HMM None - {{∅}} None - {{∅}} Unexplained
GenProp0718 oxalate degradation~A two-enzyme pathway degrades oxalate, a toxic metabolite. Formyl-CoA transferase transfers coenzyme A from formyl-CoA to oxalate, leaving formate. Oxalyl-CoA decarboxylase, a TPP-containing enzyme, removes C02 to regenerate formyl-CoA. The net result is conversion of oxalate to formate and CO2. This system was originally described in Oxalobacter formigenes from the human gut, and is found in a number of other gut bacteria. False - {{f}} None - {{∅}} Absent
Evidence_85506 GenProp0718 GENPROP None - {{∅}} None - {{∅}} Unexplained
Evidence_75134 TIGR03253 HMM False - {{f}} None - {{∅}} Absent
GenProp1034 decarboxylation/antiport proton-motive cycle: oxalate-formate~This Genome Property represents a proton-motive cycle. The cycle of decarboxylating oxalate, a dicarboxylic acid, to formate plus CO2, then exchanging the cytosolic formate for an extracellular oxalate, has the net effect of consuming one proton. This property has been studied extensively in Oxalobacter formigenes, which appears in the human microbiome and affects oxalate homeostasis. None - {{∅}} None - {{∅}} Unexplained
Component_54196 oxalyl-CoA decarboxylase False - {{f}} None - {{∅}} Absent