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Prior-Knowledge Description Expectation Prediction Conclusion Leaf Statistics
Evidence_85283 TIGR03260 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_85287 TIGR01111 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_75159 TIGR03271 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_85285 TIGR03269 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_75174 TIGR03288 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_75163 TIGR03275 HMM None - {{∅}} None - {{∅}} Unexplained
Component_63554 methyl-coenzyme M reductase operon protein D None - {{∅}} None - {{∅}} Unexplained
Evidence_85294 TIGR01114 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_75169 TIGR03285 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_75171 TIGR03287 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_85292 TIGR02507 HMM None - {{∅}} None - {{∅}} Unexplained
Component_54226 methanogenesis marker 16 metalloprotein None - {{∅}} None - {{∅}} Unexplained
Component_54220 methanogenesis radical SAM marker protein None - {{∅}} None - {{∅}} Unexplained
Component_54221 methanogenesis imperfect marker 11 None - {{∅}} None - {{∅}} Unexplained
Evidence_85289 TIGR01148 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_75155 TIGR03266 HMM None - {{∅}} None - {{∅}} Unexplained
GenProp0722 methanogenesis marker set~Members of this genome property are, at least for now, largely uncharacterized proteins that appear to represent marker proteins for methanogenic archaea, as detected by our novel algorithm, partial phylogenetic profiling. Substrates that can be reduced wih H2 to methane may include methanol only, as in Methanosphaera stadtmanae, or carbon dioxide and other compounds. This Genome Property represents proteins that both are universal in the first ten completed genomes of archaeal methanogens and can serve as markers for methanogenesis (are found nowhere else). These markers have the same phylogenetic distribution, among completely sequenced genomes, as the enzyme methyl-coenzyme M reductase, whose components (for now) are represented in a separate Genome Property, GenProp0719. This analysis was performed without the availability of an anaerobic methane-oxidizing archaeal genome sequence, and it is unclear how such a genome would affect the results. None - {{∅}} None - {{∅}} Unexplained
Component_63560 tetrahydromethanopterin S-methyltransferase, subunit C None - {{∅}} None - {{∅}} Unexplained
Component_63562 tetrahydromethanopterin S-methyltransferase, subunit E None - {{∅}} None - {{∅}} Unexplained
Evidence_85293 TIGR01149 HMM None - {{∅}} None - {{∅}} Unexplained
Component_63561 tetrahydromethanopterin S-methyltransferase, subunit D None - {{∅}} None - {{∅}} Unexplained
Component_63564 tetrahydromethanopterin S-methyltransferase, subunit G None - {{∅}} None - {{∅}} Unexplained
Component_63563 tetrahydromethanopterin S-methyltransferase, subunit F None - {{∅}} None - {{∅}} Unexplained
Evidence_75162 TIGR03274 HMM None - {{∅}} None - {{∅}} Unexplained
Component_63565 tetrahydromethanopterin S-methyltransferase, subunit H None - {{∅}} None - {{∅}} Unexplained
Evidence_75178 TIGR03259 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_75158 TIGR03270 HMM None - {{∅}} None - {{∅}} Unexplained
Component_54229 CoB--CoM heterodisulfide reductase, subunit C None - {{∅}} None - {{∅}} Unexplained
Component_54228 CoB--CoM heterodisulfide reductase, subunit B None - {{∅}} None - {{∅}} Unexplained
Component_54230 methyl-coenzyme M reductase, alpha subunit None - {{∅}} None - {{∅}} Unexplained
Component_63555 methyl-coenzyme M reductase I operon protein C None - {{∅}} None - {{∅}} Unexplained
Evidence_75160 TIGR03272 HMM None - {{∅}} None - {{∅}} Unexplained
Component_54219 methanogenesis marker domain 9 None - {{∅}} None - {{∅}} Unexplained
Component_54213 methanogenesis marker protein 4 None - {{∅}} None - {{∅}} Unexplained
Component_54214 methanogenesis marker protein 5 None - {{∅}} None - {{∅}} Unexplained
Component_54215 methanogenesis marker protein 6 None - {{∅}} None - {{∅}} Unexplained
Component_54218 methanogenesis marker protein 8 None - {{∅}} None - {{∅}} Unexplained
Evidence_85290 TIGR01112 HMM None - {{∅}} None - {{∅}} Unexplained
Component_54217 methanogenesis marker protein 7 None - {{∅}} None - {{∅}} Unexplained
Component_54211 methanogenesis marker protein 2 None - {{∅}} None - {{∅}} Unexplained
Component_63559 tetrahydromethanopterin S-methyltransferase, subunit B None - {{∅}} None - {{∅}} Unexplained
Component_54212 methanogenesis marker protein 3 None - {{∅}} None - {{∅}} Unexplained
Evidence_85288 TIGR04166 HMM None - {{∅}} None - {{∅}} Unexplained
Component_54210 methanogenesis marker protein 1 None - {{∅}} None - {{∅}} Unexplained
Evidence_75172 TIGR03291 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_75156 TIGR03267 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_85291 TIGR01113 HMM None - {{∅}} None - {{∅}} Unexplained
Component_63556 methyl coenzyme M reductase system, component A2 None - {{∅}} None - {{∅}} Unexplained
Evidence_75177 TIGR03257 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_75166 TIGR03280 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_75157 TIGR03268 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_85284 TIGR03264 HMM None - {{∅}} None - {{∅}} Unexplained
Component_54223 methanogenesis marker 13 metalloprotein None - {{∅}} None - {{∅}} Unexplained
Evidence_75165 TIGR03278 HMM None - {{∅}} None - {{∅}} Unexplained
Component_54227 methanogenesis marker protein 17 None - {{∅}} None - {{∅}} Unexplained
Evidence_75170 TIGR03286 HMM None - {{∅}} None - {{∅}} Unexplained
Component_54225 methanogenesis marker protein 15 None - {{∅}} None - {{∅}} Unexplained
Component_54232 methyl-coenzyme M reductase, gamma subunit None - {{∅}} None - {{∅}} Unexplained
Evidence_75167 TIGR03281 HMM None - {{∅}} None - {{∅}} Unexplained
Component_54231 methyl-coenzyme M reductase, beta subunit None - {{∅}} None - {{∅}} Unexplained
Evidence_75176 TIGR03256 HMM None - {{∅}} None - {{∅}} Unexplained
Component_63558 tetrahydromethanopterin S-methyltransferase, subunit A None - {{∅}} None - {{∅}} Unexplained
Component_54224 methanogenesis marker protein 14 None - {{∅}} None - {{∅}} Unexplained
Component_54222 methanogenesis marker protein 12 None - {{∅}} None - {{∅}} Unexplained
Evidence_75164 TIGR03277 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_75175 TIGR03290 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_75168 TIGR03282 HMM None - {{∅}} None - {{∅}} Unexplained