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Prior-Knowledge Description Expectation Prediction Conclusion Leaf Statistics
Component_51531 TrbI pilus assembly protein None - {{∅}} None - {{∅}} Unexplained
Evidence_70330 TIGR02755 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_70366 TIGR02781 HMM None - {{∅}} None - {{∅}} Unexplained
Component_51526 TraQ pilin inner membrane chaperone None - {{∅}} None - {{∅}} Unexplained
Evidence_70355 PF03743 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_68315 PF06586 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_70368 PF03135 HMM None - {{∅}} None - {{∅}} Unexplained
Component_51527 TraW pilus assembly protein None - {{∅}} None - {{∅}} Unexplained
Evidence_70337 TIGR02761 HMM None - {{∅}} None - {{∅}} Unexplained
Component_51534 TraU mating-pair stabilization protein None - {{∅}} None - {{∅}} Unexplained
Component_51556 TraI plasmid relaxase/helicase protein None - {{∅}} None - {{∅}} Unexplained
Evidence_68305 PF06122 HMM None - {{∅}} None - {{∅}} Unexplained
Component_51525 TraH pilus assembly protein None - {{∅}} None - {{∅}} Unexplained
Evidence_70371 PF04956 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_68314 PF07178 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_70336 TIGR02760 HMM None - {{∅}} None - {{∅}} Unexplained
GenProp0485 F and P-type conjugation systems (type IV secretion), common components~Both the F-type (F factor like) and P-type (Ti plasmid like) conjucation systems use a core set of structures for the elaboration of a conjugative pilus. Components specific to these two systems are found in related Genome Properties. None - {{∅}} None - {{∅}} Unexplained
Component_51541 T4SS protein TraE/TrbJ/VirB5 None - {{∅}} None - {{∅}} Unexplained
Evidence_68318 PF06447 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_68320 TIGR02746 HMM None - {{∅}} None - {{∅}} Unexplained
Component_51542 T4SS protein TraK/TrbG/VirB9 None - {{∅}} None - {{∅}} Unexplained
Component_51532 mate-pair stab. TraG/TrbL/VirB6 None - {{∅}} None - {{∅}} Unexplained
Evidence_68307 TIGR02738 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_70333 TIGR02758 HMM None - {{∅}} None - {{∅}} Unexplained
Component_51530 TrbC pilus assembly protein None - {{∅}} None - {{∅}} Unexplained
Component_51558 GenProp0485: conjugation common component None - {{∅}} None - {{∅}} Unexplained
Evidence_70331 TIGR02756 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_68313 TIGR02744 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_70374 TIGR02783 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_70338 TIGR02762 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_70387 TIGR02791 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_70365 TIGR02780 HMM None - {{∅}} None - {{∅}} Unexplained
Component_51543 T4SS protein TraL/TrbD/VirB3 None - {{∅}} None - {{∅}} Unexplained
Component_51535 Possible alternate TraF or TrbB None - {{∅}} None - {{∅}} Unexplained
Evidence_70334 TIGR02759 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_68326 TIGR02747 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_70370 PF05101 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_68312 TIGR02743 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_68316 PF05309 HMM None - {{∅}} None - {{∅}} Unexplained
Component_51533 TraN outer membrane mating-pair stabilization protein None - {{∅}} None - {{∅}} Unexplained
Evidence_70369 PF05245 HMM None - {{∅}} None - {{∅}} Unexplained
GenProp0484 F-type conjugation system (type IV secretion) specific components~A system for the transfer of plasmid DNA between cells via a pilus. This system is a specialized type-IV secretion system. None - {{∅}} None - {{∅}} Unexplained
Component_51537 pilin, TraA/TrbC/VirB2 None - {{∅}} None - {{∅}} Unexplained
Evidence_70360 PF04610 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_70367 TIGR00929 HMM None - {{∅}} None - {{∅}} Unexplained
Component_51538 T4SS protein TraB/TrbI/VirB10 None - {{∅}} None - {{∅}} Unexplained
Evidence_68309 TIGR02740 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_70357 TIGR02775 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_68322 PF07916 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_68308 TIGR02739 HMM None - {{∅}} None - {{∅}} Unexplained
Component_51528 TraX pilin acetylase None - {{∅}} None - {{∅}} Unexplained
Evidence_68311 TIGR02742 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_68304 PF06834 HMM None - {{∅}} None - {{∅}} Unexplained
Component_51539 ATPase, TraC/TrbE/VirB4 None - {{∅}} None - {{∅}} Unexplained
Evidence_70339 GenProp0484 GENPROP None - {{∅}} None - {{∅}} Unexplained
Component_51524 TraF pilus assembly protein None - {{∅}} None - {{∅}} Unexplained
Component_51529 TrbB pilus assembly disulfide isomerase None - {{∅}} None - {{∅}} Unexplained
Evidence_70340 GenProp0485 GENPROP None - {{∅}} None - {{∅}} Unexplained
Component_51540 coupling factor, DNA-pumping ATPase TraD None - {{∅}} None - {{∅}} Unexplained
Evidence_68310 TIGR02741 HMM None - {{∅}} None - {{∅}} Unexplained
Component_51544 T4SS protein TraV/TrbH/VirB7 None - {{∅}} None - {{∅}} Unexplained
Evidence_68319 PF05513 HMM None - {{∅}} None - {{∅}} Unexplained
GenProp0489 F-type conjugation system~F-type plasmid conjugation systems are those distinctive of the F-plasmid first described in E.coli. This system consists of a type-IV pilus specialized for plasmid DNA transduction as well as specialized machinery for mating-type recognition in the recipient cell and a relaxosome and coupling protein system for initiating and providing energy for the transfer. Two genomes properties, GenProp0484 and GenProp0485, encapsulate the F-type-specific and generic components repectively. The generic components are found in non-F-type conjugative systems such as the P and I-like systems. This parent property will match the state of the specific components property (GenProp0484) except in the following cases: when the specific property is YES and the generic property is less than YES, this property will assign the state, some evidence; when the specific property is assigned the state, none found, and the generic property is assigned a state greater than none found, this property will assign the state, not supported. None - {{∅}} None - {{∅}} Unexplained
Evidence_68303 PF06986 HMM None - {{∅}} None - {{∅}} Unexplained
Component_51557 GenProp0484: F-type specific components None - {{∅}} None - {{∅}} Unexplained
Evidence_70327 TIGR02750 HMM None - {{∅}} None - {{∅}} Unexplained