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Prior-Knowledge Description Expectation Prediction Conclusion Leaf Statistics
Component_54160 aldehyde dehydrogenase None - {{∅}} None - {{∅}} Unexplained
Component_54155 permease component None - {{∅}} None - {{∅}} Unexplained
Component_54204 periplasmic AEP binding protein None - {{∅}} None - {{∅}} Unexplained
Component_54156 permease component None - {{∅}} None - {{∅}} Unexplained
GenProp0713 2-aminoethylphosphonate catabolism via phosphonoacetate~This AEP degradation pathway utilizes PhnA, phosphonoacetate hydrolase, generating acetate and inorganic phosphate as products. None - {{∅}} None - {{∅}} Unexplained
Evidence_75137 TIGR03258 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_63432 TIGR02326 HMM None - {{∅}} None - {{∅}} Unexplained
Component_54158 2-aminoethylphosphonate--pyruvate transaminase None - {{∅}} None - {{∅}} Unexplained
Evidence_75161 TIGR03364 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_75147 TIGR03261 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_75249 TIGR03329 HMM None - {{∅}} None - {{∅}} Unexplained
Component_54288 associated FAD-dependent oxidoreductase None - {{∅}} None - {{∅}} Unexplained
Evidence_75153 GenProp0232 GENPROP None - {{∅}} None - {{∅}} Unexplained
Component_54205 permease protein None - {{∅}} None - {{∅}} Unexplained
Evidence_75221 TIGR03276 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_75146 GenProp0721 GENPROP None - {{∅}} None - {{∅}} Unexplained
GenProp0720 2-aminoethylphosphonate utilization~2-aminoethylphosphonate (2-AEP) is a common phosphonate compound found in the environment and at least two related pathways are known for its catabolism. The critical enzyme, PhnW (2-AEP:pyruvate aminotransferase) is found in both of these pathways as well as (working in the opposite direction), biosynthetic pathways. Additionally, two different ABC transporter complexes are likely responsible for the import of 2-AEP. None - {{∅}} None - {{∅}} Unexplained
Evidence_75255 TIGR03339 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_75143 GenProp0238 GENPROP None - {{∅}} None - {{∅}} Unexplained
Evidence_75148 TIGR03262 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_75154 GenProp0720 GENPROP None - {{∅}} None - {{∅}} Unexplained
Evidence_75144 GenProp0713 GENPROP None - {{∅}} None - {{∅}} Unexplained
Evidence_75254 TIGR03338 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_75079 TIGR02326 HMM None - {{∅}} None - {{∅}} Unexplained
GenProp0241 phosphonate catabolism~The capability to degrade phosphonates is believed to consist minimally of a system for transporting phosphonate compounds (those with carbon-PO3 linkages) coupled with a pathway for the hydrolysis of such bonds. Two classes of system are known, those that handle broad classes of phosphonate compounds and those that handle specific molecules. Genomes with evidence for either system will be assigned the YES state for this property. None - {{∅}} None - {{∅}} Unexplained
Evidence_75150 TIGR03265 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_75136 TIGR03255 HMM None - {{∅}} None - {{∅}} Unexplained
Component_54209 phosphonate utilization systems None - {{∅}} None - {{∅}} Unexplained
Component_54202 2-aminoethylphosphonate catabolic pathways None - {{∅}} None - {{∅}} Unexplained
Evidence_75253 TIGR03337 HMM None - {{∅}} None - {{∅}} Unexplained
Component_54200 2-aminoethylphosphonate transporters None - {{∅}} None - {{∅}} Unexplained
Component_54153 periplasmic AEP binding protein None - {{∅}} None - {{∅}} Unexplained
Evidence_75076 TIGR03227 HMM None - {{∅}} None - {{∅}} Unexplained
Component_54154 ATP-binding component None - {{∅}} None - {{∅}} Unexplained
Evidence_75075 TIGR03226 HMM None - {{∅}} None - {{∅}} Unexplained
Component_54203 2-aminoethylphosphonate transport systems None - {{∅}} None - {{∅}} Unexplained
Component_54159 phosphonoacetate hydrolase None - {{∅}} None - {{∅}} Unexplained
Evidence_75141 GenProp0712 GENPROP None - {{∅}} None - {{∅}} Unexplained
GenProp0712 2-aminoethylphosphonate (AEP) ABC transporter, type I, PhnSTUV~A multisubunit ABC transporter for the import of 2-aminoethylphosphonate (AEP, ciliatine) which is then subject to catabolism. None - {{∅}} None - {{∅}} Unexplained
Component_50909 2-aminoethylphosphonate--pyruvate transaminase None - {{∅}} None - {{∅}} Unexplained
Component_54206 ATP-binding protein None - {{∅}} None - {{∅}} Unexplained
Evidence_75133 TIGR03250 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_75078 TIGR02335 HMM None - {{∅}} None - {{∅}} Unexplained
Component_54216 Phosphonate catabolism operons associated proteins None - {{∅}} None - {{∅}} Unexplained
GenProp0721 2-aminoethylphosphonate (AEP) ABC transporter, type II~This ABC transporter is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP, ciliatine). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely. None - {{∅}} None - {{∅}} Unexplained
Evidence_75231 GenProp0721 GENPROP None - {{∅}} None - {{∅}} Unexplained
Component_54291 associated transcriptional regulators None - {{∅}} None - {{∅}} Unexplained
Component_50910 phosphonoacetaldehyde hydrolase None - {{∅}} None - {{∅}} Unexplained
Evidence_63433 TIGR01422 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_75145 GenProp0712 GENPROP None - {{∅}} None - {{∅}} Unexplained
GenProp0238 2-aminoethylphosphonate catabolism to acetaldehyde~The enzyme 2-aminoethylphosphonate--pyruvate transaminase (PhnW, EC 2.6.1.37) interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase, a HAD superfamily hydrolase, breaks the C-P bond, yielding acetaldehyde plus inorganic phosphate. In species that appear to encode a phosphonate ABC transporter, this property is likely to be present only when the large phosphonate operon proposed to encode a multisubunit C-P lyase, as found in Escherichia coli, is not found. None - {{∅}} None - {{∅}} Unexplained