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Prior-Knowledge Description Expectation Prediction Conclusion Leaf Statistics
Evidence_53033 TIGR00787 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_40684 TRAP extracytoplasmic solute receptor (ESR) None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_53035 TIGR00786 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_53063 TIGR02123 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_53051 TIGR02122 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_53062 TIGR02123 HMM None - {{∅}} None - {{∅}} Unexplained
Component_40686 DctM-like 12-transmembrane helix protein None - {{∅}} None - {{∅}} Unexplained
Evidence_53049 PF06808 HMM None - {{∅}} None - {{∅}} Unexplained
Component_40685 DctQ-like 4-transmembrane helix protein None - {{∅}} None - {{∅}} Unexplained
GenProp0176 TRAP-T (tripartite ATP-independent periplasmic transporters) family transporters~This property represents the presence of three-subunit transporters related to the DctPQM system for dicarboxylate transport in Rhodobacter capsulatus. These are secondary transporters, energized by ion gradients, rather than primary transporters powered by ATP directly. The acronym TRAP, or TRAP-T, stands for Tripartite ATP-independent Periplasmic Transporters. The characteristic architecture includes an integral membrane protein with 12 predicted transmembrane (TM) regions (e.g.DctM) and another with 4 predicted TM regions (e.g. DctQ). These two are fused in some species. Also present is an extracytoplasmic solute receptor (ESR), for which at least three families are known: DegP (TIGR00787), SmoM (PF03480), and TAXI (TIGR02122). In addition to C4 dicarboxylates, substrates moved by related transporters appear to include mannitol, aspartate derivative ectoine, and other as yet uncharacterized solutes. Some bacteria, such as Bradyrhizobium japonicum, may contain over a dozen such transporters. None - {{∅}} None - {{∅},{t}} Unexplained
Evidence_53050 PF03480 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_53034 PF04290 HMM None - {{∅}} None - {{∅}} Unexplained