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Prior-Knowledge Description Expectation Prediction Conclusion Leaf Statistics
Component_5525 2-polyprenylphenol hydroxylase None - {{∅}} None - {{∅}} Unexplained
Component_5528 ubiquinone biosynthesis C-methyltransferase None - {{∅}} True - {{t}} Unconfirmed presence
Component_5523 4-hydroxybenzoate prenyltransferase None - {{∅}} None - {{∅}} Unexplained
GenProp0136 ubiquinone biosynthesis from chorismate, aerobic~Ubiquinone, an electron and hydrogen transport cofactor important for aerobic respiration and photosynthesis, is synthesized in bacteria from chorismate and polyprenyl pyrophosphates of varying lengths [1]. Knock out of the three hydroxylation steps requiring molecular oxygen results in anaerobic synthesis of ubiquinone, indicating the presence of an alternative system [2]. In yeast and animals a different pathway exists starting from 4-hydroxyphenylpyruvate, having latter steps in common with the bacterial pathway [3]. In addition to ubiquinone, bacteria may contain menaquinone and/or phylloquinone which together make up their quinone pool [1]. None - {{∅}} None - {{∅},{t}} Unexplained
Component_5522 chorismate-pyruvate lyase None - {{∅}} None - {{∅}} Unexplained
Evidence_12851 TIGR00421 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_12857 TIGR01988 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_12850 PF01977 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_5526 3-demethylubiquinone-9 3-methyltransferase None - {{∅}} None - {{∅}} Unexplained
Evidence_12852 TIGR01982 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_12858 PF03232 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_12845 PF04345 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_12848 TIGR01475 HMM None - {{∅}} None - {{∅}} Unexplained
Component_5531 ubiquinone biosynthesis 4- and 5-hydroxylases None - {{∅}} None - {{∅}} Unexplained
Component_5524 3-prenyl-4-hydroxybenzoate decarboxylase None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_12846 TIGR01934 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_12849 TIGR01474 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_12853 TIGR01983 HMM None - {{∅}} None - {{∅}} Unexplained