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Prior-Knowledge Description Expectation Prediction Conclusion Leaf Statistics
GenProp0114 nucleotide excision repair~One mechanism of DNA repair is nucleotide excision repair. Single-stranded cuts are made on both sides of a DNA lesion and the oligomer between the cuts is removed. Very few species lack this mechanism, although the insect endosymbiont Buchnera aphidicola is an example. In bacteria, the excinuclease UvrABC performs only this function, so the presence of any one of the three subunits suggests the mechanism is (or was) present. Also required is UvrD or a related helicase with similar effect, but this helicase acts in other processes as well. A large number of genes are active in eukaryotes. The characteristic size of the oligomer removed is also different in eukaryotes. The status of nucleotide excision repair in the archaea is not fully defined. None - {{∅}} True - {{t}} Unconfirmed presence
Component_232 DNA helicase II None - {{∅}} None - {{∅}} Unexplained
Evidence_198 TIGR01075 HMM None - {{∅}} None - {{∅}} Unexplained
Component_230 excinuclease ABC subunit B None - {{∅}} True - {{t}} Unconfirmed presence
Component_231 excinuclease ABC subunit C None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_197 TIGR00194 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_196 TIGR00631 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_195 TIGR00630 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_229 excinuclease ABC subunit A None - {{∅}} True - {{t}} Unconfirmed presence