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Prior-Knowledge Description Expectation Prediction Conclusion Leaf Statistics
Component_51290 YopD None - {{∅}} None - {{∅}} Unexplained
Evidence_65820 TIGR02514 HMM None - {{∅}} None - {{∅}} Unexplained
Component_51228 type III secretion protein YscO None - {{∅}} None - {{∅}} Unexplained
Evidence_65827 TIGR02513 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_65830 PF07321 HMM None - {{∅}} None - {{∅}} Unexplained
Component_51252 OrgA/MxiK None - {{∅}} None - {{∅}} Unexplained
Component_51236 type III secretion ATPase None - {{∅}} None - {{∅}} Unexplained
Evidence_65862 TIGR02554 HMM None - {{∅}} None - {{∅}} Unexplained
Component_51217 type III secretion system needle protein None - {{∅}} None - {{∅}} Unexplained
Evidence_65853 TIGR01399 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_65897 TIGR02572 HMM None - {{∅}} None - {{∅}} Unexplained
Component_51231 YOP proteins translocation protein K None - {{∅}} None - {{∅}} Unexplained
Component_51249 secreted proteins, effectors None - {{∅}} None - {{∅}} Unexplained
Evidence_65829 TIGR02502 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_65861 TIGR02553 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_65836 TIGR02509 HMM None - {{∅}} None - {{∅}} Unexplained
Component_51245 SpaK/InvB/YsaK None - {{∅}} None - {{∅}} Unexplained
Evidence_65834 TIGR01102 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_65882 TIGR02567 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_65856 TIGR02551 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_65901 PF05844 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_65860 TIGR02101 HMM None - {{∅}} None - {{∅}} Unexplained
Component_51279 LcrE/YopN/InvE/MxiC None - {{∅}} None - {{∅}} Unexplained
Component_51220 type III secretion effector delivery regulator, TyeA family None - {{∅}} None - {{∅}} Unexplained
Evidence_65894 PF04888 HMM None - {{∅}} None - {{∅}} Unexplained
Component_51244 type III secretion protein, HrcV None - {{∅}} None - {{∅}} Unexplained
Component_51224 type III secretion chaperone SycN None - {{∅}} None - {{∅}} Unexplained
Component_51229 type III secretion protein, YscT/HrpX family None - {{∅}} None - {{∅}} Unexplained
Component_51230 type III secretion protein, YscU/HrpY family None - {{∅}} None - {{∅}} Unexplained
Component_51226 type III secretion protein, YscG family None - {{∅}} None - {{∅}} Unexplained
Evidence_65898 TIGR02573 HMM None - {{∅}} None - {{∅}} Unexplained
GenProp0052 type III secretion~Type III secretion systems are found in a number of pathogenenic gram-negative bacteria. These systems consist of approximately twenty-five translocation proteins, as well as those proteins that are transported either across the bacterial inner and outer membrane, into the medium, or further across a eukaryotic target cell membrane. Substrates for type III secretion are not cleaved during transport, although the signal for transport appears to lie near the N-terminus (or in the RNA); chaperones act as well for some substrates and may be a second signal. Proteins delivered to the target cell cytosol and active in pathogenesis are termed effectors. Type III secretion systems resemble some of the flagellar export apparatus. In some cases, a type III pilus is observed and required for effector delivery. Gene nomeclature transposes across genomes: ysc in Yersinia, bsc in Bordetella, esc in enteropathogenic E. coli, hrc in plant pathogens, etc., so that Ysc, EscD, HrcD, etc. are homologous and functionally analogous [1,2]. None - {{∅}} None - {{∅}} Unexplained
Component_51282 SseC/YopB/EspD None - {{∅}} None - {{∅}} Unexplained
Component_51225 type III secretion system chaperone, YscB family None - {{∅}} None - {{∅}} Unexplained
Evidence_65832 TIGR01404 HMM None - {{∅}} None - {{∅}} Unexplained
Component_51222 type III secretion apparatus protein, YscI/HrpB None - {{∅}} None - {{∅}} Unexplained
Component_51251 PrgH None - {{∅}} None - {{∅}} Unexplained
Evidence_65859 TIGR02552 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_65826 TIGR02503 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_65824 TIGR02497 HMM None - {{∅}} None - {{∅}} Unexplained
Component_51223 type III secretion apparatus protein, HrpE/YscL family None - {{∅}} None - {{∅}} Unexplained
Evidence_65868 TIGR02560 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_65821 TIGR02516 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_65863 TIGR02555 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_65857 TIGR01403 HMM None - {{∅}} None - {{∅}} Unexplained
Component_51218 needle length determinant None - {{∅}} None - {{∅}} Unexplained
Component_51247 YscQ/HrcQ/SpaO None - {{∅}} None - {{∅}} Unexplained
Evidence_65865 TIGR02558 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_65891 TIGR02568 HMM None - {{∅}} None - {{∅}} Unexplained
Component_51286 LcrG/PcrG None - {{∅}} None - {{∅}} Unexplained
Evidence_65854 PF03519 HMM None - {{∅}} None - {{∅}} Unexplained
Component_51257 HrpB4 None - {{∅}} None - {{∅}} Unexplained
Evidence_65823 TIGR02500 HMM None - {{∅}} None - {{∅}} Unexplained
Component_51235 type III apparatus lipoprotein, None - {{∅}} None - {{∅}} Unexplained
Evidence_65875 PF05932 HMM None - {{∅}} None - {{∅}} Unexplained
Component_51219 type III secretion outer membrane pore, YscC/HrcC family None - {{∅}} None - {{∅}} Unexplained
Evidence_65864 TIGR02557 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_65818 TIGR02105 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_65873 TIGR02561 HMM None - {{∅}} None - {{∅}} Unexplained
Component_51221 type III secretion apparatus protein, YscD/HrpQ family None - {{∅}} None - {{∅}} Unexplained
Component_51232 type III secretion apparatus protein, YscR/HrcR family None - {{∅}} None - {{∅}} Unexplained
Evidence_65858 PF03518 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_65825 TIGR02499 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_65837 TIGR02544 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_65822 TIGR02511 HMM None - {{∅}} None - {{∅}} Unexplained
Component_51270 type III secretion chaperone YscW None - {{∅}} None - {{∅}} Unexplained
Component_51263 type III secretion chaperone SycH None - {{∅}} None - {{∅}} Unexplained
Evidence_65866 TIGR02559 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_65831 TIGR01401 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_65835 TIGR02501 HMM None - {{∅}} None - {{∅}} Unexplained
Component_51233 type III secretion system protein, YseE family None - {{∅}} None - {{∅}} Unexplained
Component_51227 type III secretion protein, YscX family None - {{∅}} None - {{∅}} Unexplained
Component_51234 type III secretion protein YopR(YscH) None - {{∅}} None - {{∅}} Unexplained
Component_51256 HrpB7 None - {{∅}} None - {{∅}} Unexplained
Component_51248 YscS/HrcS/SctS/EscS None - {{∅}} None - {{∅}} Unexplained
Component_51255 HrpB2 None - {{∅}} None - {{∅}} Unexplained
Component_51260 HrpB1/HrpK None - {{∅}} None - {{∅}} Unexplained
Component_51285 regulatory component LcrR None - {{∅}} None - {{∅}} Unexplained
Component_51254 HpaP None - {{∅}} None - {{∅}} Unexplained
Component_51250 LcrH/SycD/SpaT None - {{∅}} None - {{∅}} Unexplained
Evidence_65838 TIGR02546 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_65833 PF06578 HMM None - {{∅}} None - {{∅}} Unexplained
Evidence_65828 TIGR02508 HMM None - {{∅}} None - {{∅}} Unexplained