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Prior-Knowledge Description Expectation Prediction Conclusion Leaf Statistics
GenProp0921 radical SAM pair and His-Xaa-Ser repeats peptide~This Genome Property represents a pair of radical SAM proteins that occur as tandem genes in bacteria. The most likely function for this system is post-translational modification of ribosomally produced peptides. TIGR03979 describes a family with low levels of sequence similarity overall, a C-terminal putative peptidoglycan-binding domain, but also a striking region with five to seven repeats of His-Xaa-Ser. This family only occurs next to the radical SAM pair. Surprisingly, a search based on the His-Xaa-Ser repeat region and just a few flanking amino acids finds that essentially every radical SAM pair has a His-Xaa-Ser repeats region peptide nearby. TIGR03976 describes an additional protein in this system, including one branch of the family with the signature motif LLNDYxLRE. None - {{∅}} False - {{f}} Unconfirmed absence
Component_63257 upstream radical SAM protein None - {{∅}} False - {{f}} Unconfirmed absence
Component_63261 putative quinone modification maturase None - {{∅}} False - {{f}} Unconfirmed absence
Component_63260 His/Ser-rich radical SAM pair-associated protein None - {{∅}} False - {{f}} Unconfirmed absence
Evidence_84953 TIGR03979 HMM None - {{∅}} False - {{f}} Unconfirmed absence
Evidence_84954 TIGR03981 HMM None - {{∅}} False - {{f}} Unconfirmed absence
Component_63262 conserved hypothetical protein TIGR03982 None - {{∅}} False - {{f}} Unconfirmed absence
Component_63259 LLNDYxLRE motif rSAM-associated protein None - {{∅}} False - {{f}} Unconfirmed absence
Evidence_84951 TIGR03976 HMM None - {{∅}} False - {{f}} Unconfirmed absence
Evidence_84952 TIGR03978 HMM None - {{∅}} False - {{f}} Unconfirmed absence
Component_63258 downstream radical SAM protein None - {{∅}} False - {{f}} Unconfirmed absence
Evidence_84950 TIGR03977 HMM None - {{∅}} False - {{f}} Unconfirmed absence
Evidence_84955 TIGR03982 HMM None - {{∅}} False - {{f}} Unconfirmed absence