Get results CSV file
Prior-Knowledge Description Expectation Prediction Conclusion Leaf Statistics
Evidence_84784 TIGR03873 HMM None - {{∅}} False - {{f}} Unconfirmed absence
Component_63145 proposed F420-0 periplasmic binding protein None - {{∅}} False - {{f}} Unconfirmed absence
Component_63146 proposed F420-0 permease None - {{∅}} False - {{f}} Unconfirmed absence
GenProp0896 proposed F420-0 transporter~This small clade of ABC-type transporters are found in Actinobacteria containing numerous genes requiring the coenzyme F420. This property was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this is an f420-0 (that is, F420 lacking only the polyglutamate tail) ABC transporter. None - {{∅}} False - {{f}} Unconfirmed absence
Evidence_84782 TIGR03868 HMM None - {{∅}} False - {{f}} Unconfirmed absence
Evidence_84783 TIGR03869 HMM None - {{∅}} False - {{f}} Unconfirmed absence
Component_63147 proposed F420-0 transporter ATP-binding protein None - {{∅}} False - {{f}} Unconfirmed absence