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Prior-Knowledge Description Expectation Prediction Conclusion Leaf Statistics
Component_412 NusA C-terminal duplication None - {{∅}} False - {{f}} Unconfirmed absence
Evidence_2734 TIGR01049 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_84398 GenProp0132 GENPROP None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_2694 TIGR01954 HMM None - {{∅}} False - {{f}} Unconfirmed absence
Component_372 ribosomal protein S10, rpsJ/nusE None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_2724 TIGR00922 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_2714 TIGR01951 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_392 transcription termination-antitermination factor NusG None - {{∅}} True - {{t}} Unconfirmed presence
Component_402 transcription termination factor NusA None - {{∅}} True - {{t}} Unconfirmed presence
Component_62818 Nus factors (NusA, NusB, NusG, and NexE/S10) None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_84397 TIGR00767 HMM None - {{∅}} True - {{t}} Unconfirmed presence
GenProp0132 transcription termination - antitermination Nus factors~This Genome Property describes the set of Nus factors NusA, NusB, and NusG, as well as ribosomal protein S10 which is known as NusE. The name Nus, for N-utilization substance, reflects the phenomenology of exploitation of N factors for phage lambda in Escherichia coli. Much of the literature of these transcription termination/anti-termination factors revolves around the interaction with the transcription termination factor Rho, but factor Rho and cis-acting rho-utilization sites are less well distributed than the N-factors, which are essentially universal in bacteria. In species with Rho, Nus factors improve transcriptase turnover speeds. Nus factors can block Rho action, a process called anti-termination. See GenProp0812 for a treatment of rho-dependent transcription termination. None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_7594 TIGR01956 HMM None - {{∅}} False - {{f}} Unconfirmed absence
Evidence_2704 TIGR01953 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_62817 rho termination factor None - {{∅}} True - {{t}} Unconfirmed presence
GenProp0812 rho-dependent termination~Transcriptional termination in bacteria occurs in two modes, one of them dependent on the termination factor rho. Rho occurs in the overwhelming majority of bacteria, and is an essential protein in most but not all of those species. When Rho is present, the Nus factors (NusA, NusB, and NusG) participate in rho-dependent termination, although those proteins have other functions as well and are more nearly universal than Rho itself. None - {{∅}} True - {{t}} Unconfirmed presence
Component_382 transcription termination-antitermination factor NusB None - {{∅}} True - {{t}} Unconfirmed presence