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Prior-Knowledge Description Expectation Prediction Conclusion Leaf Statistics
Evidence_61341 TIGR01230 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_61342 TIGR01273 HMM None - {{∅}} False - {{f}} Unconfirmed absence
Evidence_72658 GenProp0639 GENPROP None - {{∅}} Both - {{t},{f}} Unconfirmed contradictory
Component_51802 carbamate kinase None - {{∅}} False - {{f}} Unconfirmed absence
Component_48844 agmatinase None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72663 TIGR04301 HMM None - {{∅}} False - {{f}} Unconfirmed absence
GenProp0645 putrescine biosynthesis~The polyamine putrescine is both the precursor of the essential growth factor spermidine as well as an intermediate for the degradation of arginine and ornithine (and those compounds which may be converted to ornithine). Putrescine may be generated from glutamate and arginine via a number of pathways. None - {{∅}} Both - {{t},{f}} Unconfirmed contradictory
Evidence_72671 GenProp0642 GENPROP None - {{∅}} Both - {{t},{f}} Unconfirmed contradictory
GenProp0639 arginine degradation via citrulline, ATP-generating~Arginine may be degraded to generate ammonia, ATP and ornithine via citrulline and carbamoyl phosphate. The ornithine may be further processed via putrescine. Both - {{t,f}} Both - {{t},{f}} Ambiguous contradictory
Evidence_72645 TIGR00658 HMM Both - {{t,f}} True - {{t}} Ambiguous presence
Component_51816 putrescine biosynthesis pathways None - {{∅}} Both - {{t},{f}} Unconfirmed contradictory
Evidence_72672 GenProp0643 GENPROP None - {{∅}} Both - {{t},{f}} Unconfirmed contradictory
Component_51801 ornithine carbamoyltransferase Both - {{t,f}} True - {{t}} Ambiguous presence
Component_51811 arginine decarboxylase None - {{∅}} False - {{f}} Unconfirmed absence
Evidence_72646 TIGR00746 HMM None - {{∅}} False - {{f}} Unconfirmed absence
Evidence_72673 GenProp0644 GENPROP None - {{∅}} None - {{∅}} Unexplained
Component_63080 arginine-ornithine antiporter None - {{∅}} False - {{f}} Unconfirmed absence
Evidence_84702 TIGR03810 HMM None - {{∅}} False - {{f}} Unconfirmed absence
Component_51800 arginine deiminase Both - {{t,f}} False - {{f}} Ambiguous absence
Evidence_72659 TIGR01229 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_51812 ornithine decarboxylase None - {{∅}} False - {{f}} Unconfirmed absence
Evidence_72644 TIGR01078 HMM Both - {{t,f}} False - {{f}} Ambiguous absence
GenProp0643 putrescine biosynthesis from arginine via ornithine~An alternative to the SpeAB pathway to putrescine from arginine via agmatine (GenProp0642) involves ornithine decarboxylase (SpeC or SpeF). Ornithine can be generated via several amino acids including glutamate (GenProp0118) and possibly proline as well as the pathways from arginine represented here. A pathway found only in eukaryotes for the biosynthesis of creatine also incidentally generates ornithine (and guanidinoacetate) from arginine and glycine. None - {{∅}} Both - {{t},{f}} Unconfirmed contradictory
Component_51813 conversion of arginine to ornithine None - {{∅}} True - {{t}} Unconfirmed presence
GenProp0642 putrescine biosynthesis from arginine utilizing agmatinase~L-arginine can be converted to the polyamine putrescine via this pathway for the purposes of arginine catabolism or for the biosynthesis of spermidine. This version of the pathway utilizes agmatinase while another does the same reaction in two steps via carbamoylputrescine. None - {{∅}} Both - {{t},{f}} Unconfirmed contradictory