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Prior-Knowledge Description Expectation Prediction Conclusion Leaf Statistics
Evidence_72498 TIGR02888 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72523 TIGR02907 HMM None - {{∅}} False - {{f}} Unconfirmed absence
Component_51671 sporulation protein YtvI None - {{∅}} True - {{t}} Unconfirmed presence
Component_51660 stage IV sporulation protein B None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72492 TIGR02886 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_51652 dipicolinic acid synthetase, A subunit None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72491 TIGR02885 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_51615 stage III sporulation protein AB None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72463 TIGR02853 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_51646 stage III sporulation protein AD None - {{∅}} True - {{t}} Unconfirmed presence
Component_51635 putative sporulation protease YyaC None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72462 TIGR02856 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72470 TIGR02860 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_51690 germination protein YpeB None - {{∅}} True - {{t}} Unconfirmed presence
Component_51674 sporulation protein YqfD None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72461 TIGR02855 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72422 TIGR02834 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72468 TIGR02858 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72469 TIGR02859 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72479 TIGR02870 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72414 TIGR02829 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_51651 sporulation protein YqfC None - {{∅}} True - {{t}} Unconfirmed presence
Component_51695 sigma-I (heat shock-induced) None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72517 TIGR02902 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_51659 sigma-H None - {{∅}} True - {{t}} Unconfirmed presence
Component_51699 stage III sporulation protein AF None - {{∅}} True - {{t}} Unconfirmed presence
Component_51667 SASP, SspH-type None - {{∅}} True - {{t}} Unconfirmed presence
Component_51609 stage III sporulation protein AE (TIGR02829) None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72488 TIGR02881 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72445 TIGR02839 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72522 TIGR02905 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72425 TIGR01442 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72415 PF00269 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72444 TIGR02838 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_51693 sporulation protein YabQ None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72521 TIGR02904 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_51628 stage II sporulation protein R None - {{∅}} True - {{t}} Unconfirmed presence
Component_51650 spore coat assembly protease YabG None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72451 TIGR02844 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_51658 stage III sporulation protein AA None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72481 TIGR02872 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72452 TIGR02845 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_51706 spore coat protein YutH None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72420 TIGR02833 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72480 TIGR02871 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72499 TIGR02892 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_51703 ATP-dependent protease LonB None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72500 TIGR02893 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_51661 anti-sigma-F None - {{∅}} True - {{t}} Unconfirmed presence
GenProp0610 endospore formation marker gene set~The article by Wu, et al. on Carboxydothermus hydrogenoformans Z-2901 describes a minimal set of genes whose phylogenetic profile appears to exactly match the assignment of endospore formation capability. The list corresponds to a fairly small fraction of sporulation and germination-related genes in Bacillus subtilis. This property reflects those genes for which identifying hidden Markov models (HMMs) with appropriate scope are available. Also included in this property, as optional rather than mandatory components, are various classes of small, acid-soluble spore protein, or SASP, where one class may expand into a paralogous family while another class is lost in any given genome. None - {{∅}} Both - {{t},{f}} Unconfirmed contradictory
Component_51680 stage V sporulation protein K None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72483 TIGR02874 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_51634 sporulation protein YtaF None - {{∅}} True - {{t}} Unconfirmed presence
Component_51704 spore coat protein, CotS family None - {{∅}} True - {{t}} Unconfirmed presence
Component_51633 stage V sporulation protein AE None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72513 TIGR02899 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_51666 stage II sporulation protein D None - {{∅}} True - {{t}} Unconfirmed presence
Component_51627 stage IV sporulation protein A None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72507 TIGR02896 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72484 TIGR02876 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_51673 sporulation protein YtfJ None - {{∅}} True - {{t}} Unconfirmed presence
Component_51614 sporulation protein YunB None - {{∅}} True - {{t}} Unconfirmed presence
Component_51707 stage VI sporulation protein D None - {{∅}} False - {{f}} Unconfirmed absence
Evidence_72464 TIGR02852 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_51670 sporulation protein YlbJ None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72495 TIGR02887 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_51619 sporulation protein YtxC None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72520 TIGR02906 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_51672 stage 0 sporulation protein A None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72514 TIGR02900 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72458 TIGR02850 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72437 TIGR02836 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_51691 sporulation protein, YlmC/YmxH family None - {{∅}} True - {{t}} Unconfirmed presence
Component_51692 sporulation protein YabP None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72438 TIGR02837 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_51665 stage II sporulation protein E None - {{∅}} True - {{t}} Unconfirmed presence
Component_51606 germination protease None - {{∅}} True - {{t}} Unconfirmed presence
Component_51705 spore coat protein YsxE None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72412 TIGR01441 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_51621 SASP, gamma type None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72511 TIGR02898 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72459 TIGR02854 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_51632 stage V sporulation protein AC None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72494 PF03323 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72497 TIGR02889 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_51685 sigma-F None - {{∅}} True - {{t}} Unconfirmed presence
Component_51636 stage V sporulation protein AD None - {{∅}} True - {{t}} Unconfirmed presence
Component_51610 stage III sporulation protein AG None - {{∅}} True - {{t}} Unconfirmed presence
Component_51700 germination lipoprotein, YhcN/YlaJ family None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72509 TIGR02895 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72482 TIGR02875 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72457 TIGR02849 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72419 TIGR02832 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_51620 sigma-E None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72456 TIGR02848 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72460 TIGR02851 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_51643 sigma-K None - {{∅}} False - {{f}} Unconfirmed absence
Evidence_72476 TIGR02861 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_51687 GerKB-like paralogous family None - {{∅}} True - {{t}} Unconfirmed presence
Component_51648 sigma-E protease SpoIIGA None - {{∅}} True - {{t}} Unconfirmed presence
Component_51649 stage V sporulation protein T None - {{∅}} True - {{t}} Unconfirmed presence
Component_51647 sigma-G None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72454 TIGR02846 HMM None - {{∅}} False - {{f}} Unconfirmed absence
Component_51645 stage III sporulation protein AC None - {{∅}} True - {{t}} Unconfirmed presence
Component_51607 SASP, alpha/beta type None - {{∅}} True - {{t}} Unconfirmed presence
Component_51688 GerKA-like paralogous family None - {{∅}} True - {{t}} Unconfirmed presence
Component_51702 stage V sporulation protein B None - {{∅}} True - {{t}} Unconfirmed presence
Component_51611 stage II sporulation protein M None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72446 TIGR02840 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72416 TIGR02830 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72493 TIGR00912 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_51686 anti-anti-sigma-F None - {{∅}} True - {{t}} Unconfirmed presence
Component_51641 transcriptional regulator SpoIIID None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72473 TIGR02867 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72417 TIGR02831 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72447 TIGR02841 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_51701 spore coat assembly protein SafA (yrbB) None - {{∅}} True - {{t}} Unconfirmed presence
Component_51653 dipicolinic acid synthetase, B subunit None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72471 TIGR01925 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72424 TIGR02835 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_72475 TIGR02865 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_51664 stage II sporulation protein P None - {{∅}} True - {{t}} Unconfirmed presence
Component_51689 GerKC-like paralogous family None - {{∅}} True - {{t}} Unconfirmed presence