Prior-Knowledge | Description | Expectation | Prediction | Conclusion | Leaf Statistics |
---|---|---|---|---|---|
Evidence_63434 | TIGR02329 HMM | None - {{∅}} | False - {{f}} | Unconfirmed absence | |
Evidence_63437 | TIGR01800 HMM | None - {{∅}} | True - {{t}} | Unconfirmed presence | |
Component_50916 | 2-methylcitrate synthase family | None - {{∅}} | True - {{t}} | Unconfirmed presence | |
Component_50920 | 2-methylisocitrate dehydratase | None - {{∅}} | False - {{f}} | Unconfirmed absence | |
Evidence_63438 | TIGR02330 HMM | None - {{∅}} | True - {{t}} | Unconfirmed presence | |
Evidence_63441 | TIGR02333 HMM | None - {{∅}} | False - {{f}} | Unconfirmed absence | |
Evidence_63436 | TIGR02317 HMM | None - {{∅}} | True - {{t}} | Unconfirmed presence | |
Component_50911 | propionate catabolism operon regulator PrpR | None - {{∅}} | False - {{f}} | Unconfirmed absence | |
Component_50915 | methylisocitrate lyase PrpB | None - {{∅}} | True - {{t}} | Unconfirmed presence | |
Component_50921 | AcnD-accessory protein PrpF | None - {{∅}} | False - {{f}} | Unconfirmed absence | |
Component_50917 | 2-methylcitrate dehydratase | None - {{∅}} | True - {{t}} | Unconfirmed presence | |
GenProp0240 | propionyl-CoA catabolism via methylcitric acid~This property describes one of at least five pathways for propionyl-CoA catabolism in prokaryotes. This pathway requires oxaloacetate and later releases succinate, both of which are TCA cycle intermediates. TCA cycle enzymes convert succinate back to oxaloacetate, and so this pathway is a cycle. Propionyl-CoA may derive from propionate, propionaldehyde, or other compounds. Propionyl-CoA plus oxaloacetate is converted by PrpC to 2-methylcitrate, which is then converted in two steps, by PrpD and an aconitase, to 2-methylisocitrate. 2-methylisocitrate is cleaved by PrpB to pyruvate and succinate. The TCA cycle enzymes needed to complete the cycle are not modelled here as part of the pathway | None - {{∅}} | Both - {{t},{f}} | Unconfirmed contradictory | |
Evidence_63442 | TIGR02334 HMM | None - {{∅}} | False - {{f}} | Unconfirmed absence |