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Prior-Knowledge Description Expectation Prediction Conclusion Leaf Statistics
Component_42716 ribose-phosphate pyrophosphokinase None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_55077 TIGR01251 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_42715 orotidine 5'-phosphate decarboxylase None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_55081 TIGR00240 HMM None - {{∅}} False - {{f}} Unconfirmed absence
Evidence_55080 TIGR01037 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_42717 aspartate carbamoyltransferase, regulatory subunit None - {{∅}} False - {{f}} Unconfirmed absence
Evidence_55071 TIGR00856 HMM None - {{∅}} False - {{f}} Unconfirmed absence
Evidence_53107 TIGR01368 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_55078 TIGR02127 HMM None - {{∅}} False - {{f}} Unconfirmed absence
Evidence_55089 PF01180 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_40739 aspartate carbamoyltransferase None - {{∅}} True - {{t}} Unconfirmed presence
GenProp0187 pyrimidine (uridine-5'-phosphate) de novo biosynthesis~De novo pyrimidine biosynthesis procedes from CO2 (bicarbonate), an NH2 group from glutamine or free ammonia, and aspartate. A ring compound, N-carbomoyl-L-aspartate is formed, then converted in two more steps into orotate. The ribose moiety is then added from alpha-D-5-P-ribosylpyrophosphate (PRPP), which is also a precursor of purines, histidine, and tryptophan. The resulting orotidine monophosphate is decarboxylated to uridine monophosphate (UMP), a pyrimidine nucleotide from which other pyrimidines are made. The few species lacking pyrimidine de novo biosynthesis include some members of the Chlamydiae, Mycoplasmatales, Rickettsiales, and Spirochaetes. None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_55070 TIGR00670 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_55072 TIGR00857 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_40737 carbamoyl-phosphate synthase, small subunit None - {{∅}} True - {{t}} Unconfirmed presence
Component_42714 orotate phosphoribosyltransferase None - {{∅}} True - {{t}} Unconfirmed presence
Component_42712 dihydroorotase None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_53108 TIGR01369 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Component_42713 dihydroorotate dehydrogenase None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_55076 TIGR01740 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_55074 TIGR00336 HMM None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_55073 TIGR01036 HMM None - {{∅}} False - {{f}} Unconfirmed absence
Component_40738 carbamoyl-phosphate synthase, large subunit None - {{∅}} True - {{t}} Unconfirmed presence
Evidence_55075 TIGR01367 HMM None - {{∅}} False - {{f}} Unconfirmed absence