Prior-Knowledge | Description | Expectation | Prediction | Conclusion | Leaf Statistics |
---|---|---|---|---|---|
GenProp0648 | phage shock protein regulon~This property describes a regulon present in E. coli and a number of other species induced by various stresses including osmotic shock, ethanol, heat, and expression of various secretins, as occurs with infection by certain filamentous phage. A common thread to these stressors may be compromise of the inner membrane and decrease of the protonmotive force. Most proteins of the regulon occur in a single operon, but at least one member, pspG, is located elsewhere in most genomes. The signature genes of the the phage shock regulon are the sigma-54-dependent positive regulator PspF, PspA which binds to and inhibits PspF, and PspB and PspC which act together as both regulatory and effector proteins of the phage shock regulon. PspG occurs in most but not all phage shock-positive genomes, while PspD and PspE are found only in a minority of phage shock operons. | None - {{∅}} | True - {{t}} | Unconfirmed presence | |
Evidence_72685 | TIGR02979 HMM | None - {{∅}} | True - {{t}} | Unconfirmed presence | |
Component_51828 | phage shock protein PspD | None - {{∅}} | True - {{t}} | Unconfirmed presence | |
Evidence_72684 | TIGR02975 HMM | None - {{∅}} | True - {{t}} | Unconfirmed presence | |
Evidence_72681 | TIGR02977 HMM | None - {{∅}} | True - {{t}} | Unconfirmed presence | |
Component_51824 | phage shock protein PspC | None - {{∅}} | True - {{t}} | Unconfirmed presence | |
Component_51823 | phage shock protein PspB | None - {{∅}} | True - {{t}} | Unconfirmed presence | |
Component_51822 | phage shock protein PspA | None - {{∅}} | True - {{t}} | Unconfirmed presence | |
Evidence_72682 | TIGR02976 HMM | None - {{∅}} | True - {{t}} | Unconfirmed presence | |
Component_51829 | rhodanese PspE | None - {{∅}} | True - {{t}} | Unconfirmed presence | |
Evidence_72683 | TIGR02974 HMM | None - {{∅}} | True - {{t}} | Unconfirmed presence | |
Component_51826 | signa-54-dependent activagtor PspF | None - {{∅}} | True - {{t}} | Unconfirmed presence | |
Component_51827 | phage shock protein PspG (YjbO) | None - {{∅}} | True - {{t}} | Unconfirmed presence | |
Evidence_72680 | TIGR02978 HMM | None - {{∅}} | True - {{t}} | Unconfirmed presence | |
Evidence_72686 | TIGR02981 HMM | None - {{∅}} | True - {{t}} | Unconfirmed presence |