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Publications of 2003

Abifadel M., Varret M., Rabes J.P., Allard D., Ouguerram K., Devillers M., Cruaud C., Benjannet S., Wickham L., Erlich D., Derre A., Villeger L., Farnier M., Beucler I., Bruckert E., Chambaz J., Chanu B., Lecerf J.M., Luc G., Moulin P., Weissenbach J., Prat A., Krempf M., Junien C., Seidah N.G. and Boileau C.
 “Mutations in PCSK9 cause autosomal dominant hypercholesterolemia
 Nat. Genet. 2003. 34:154-156.

Acharya S., Foster P.L., Brooks P. and Fishel R.
 “The coordinated functions of the E. coli MutS and MutL proteins in mismatch repair
 Mol. Cell. 2003. 12:233-246.

Bocs S., Cruveiller S., Vallenet D., Nuel G. and Médigue C.
 “AMIGene: Annotation of MIcrobial Genes
 Nucl. Acid. Res.. 2003. 31:3723-3726 (2003).

Bouneau L., Fischer C., Ozouf-Costaz C., Froschauer A., Jaillon O., Coutanceau J.P., Korting C., Weissenbach J., Bernot A. and Volff J.N.
 “An active non-LTR retrotransposon with tandem structure in the compact genome of the pufferfish Tetraodon nigroviridis
 Genome Res.. 2003. 1686-1694.

Bouneau L., Lardier G., Fischer C., Ronsin M., Weissenbach J. and Bernot A.
 “Analysis of 148 kb of genomic DNA of Tetraodon nigroviridis covering an amylase gene family
 DNA Seq.. 2003. 14:1-13.

Chabardes-Garonne D., Mejean A., Aude J.C., Cheval L., Di Stefano A., Gaillard M.C., Imbert-Teboul M., Wittner M., Balian C., Anthouard V., Robert C., Segurens B., Wincker P., Weissenbach J., Doucet A. and Elalouf J.M.
 “A panoramic view of gene expression in the human kidney
 Proc. Natl. Acad. Sci. USA. 2003. 100:13710-13715.

Charvin D., Cifuentes-Diaz C., Fonknechten N., Joshi V., Hazan J., Melki J. and Betuing S.
 “Mutations of SPG4 are responsible for a loss of function of spastin, an abundant neuronal protein localized in the nucleus
 Hum. Mol. Genet.. 2003. 12:71-78.

Chouari R., Le Paslier D., Daegelen P., Ginestet P., Weissenbach J. and Sghir A.
 “Molecular evidence for novel planctomycete diversity in a municipal wastewater treatment plant
 Appl. Environ. Microbiol.. 2003. 69:7354-7363.

Cohen G.N., Barbe V., Flament D., Galperin M., Heilig R., Lecompte O., Poch O., Prieur D., Querellou J., Ripp R., Thierry J.C., Van der Oost J., Weissenbach J., Zivanovic Y. and Forterre P.
 “An integrated analysis of the genome of the hyperthermophilic archaeon Pyrococcus abyssi
 Mol. Microbiol.. 2003. 47:1495-1512.

Cruveiller S., Jabbari K., Clay O. and Bernardi G.
 “Compositional features of eukaryotic genomes for checking predicted genes
 Brief Bioinform.. 2003. 4:43-52.

Desloire S., Gherbi H., Laloui W., Marhadour S., Clouet V., Cattolico L., Falentin C., Giancola S., Renard M., Budar F., Small I., Caboche M., Delourme R. and Bendahmane A.
 “Identification of the fertility restoration locus, Rfo, in radish, as a member of the pentatricopeptide-repeat protein family
 EMBO Rep. 2003. 4:588-594.

Dode C., Levilliers J., Dupont J.M., De Paepe A., Le Du N., Soussi-Yanicostas N., Coimbra R.S., Delmaghani S., Compain-Nouaille S., Baverel F., Pecheux C., Le Tessier D., Cruaud C., Delpech M., Speleman F., Vermeulen S., Amalfitano A., Bachelot Y., Bouchard P., Cabrol S., Carel JC., Delemarre-van de Waal H., Goulet-Salmon B., Kottler M.L., Richard O., Sanchez-Franco F., Saura R., Young J., Petit C. and Hardelin J.P.
 “Loss-of-function mutations in FGFR1 cause autosomal dominant Kallmann syndrome
 Nat. Genet. 2003. 33:463-465.

Drezen J.M., Provost B., Espagne E., Cattolico L., Dupuy C., Poirie M., Periquet G. and Huguet E.
 “Polydnavirus genome: integrated vs. free virus
 J. Insect. Physiol. 2003. 49:407-417 (2003).

Dufresne A., Salanoubat M., Partensky F., Artiguenave F., Axmann I.M., Barbe V., Duprat S., Galperin M.Y., Koonin E.V., Le Gall F., Makarova K.S., Ostrowski M., Oztas S., Robert C., Rogozin I.B., Scanlan D.J., Tandeau de Marsac N., Weissenbach J., Wincker P., Wolf Y.I. and Hess W.R.
 “Genome sequence of the cyanobacterium Prochlorococcus marinus SS120, a nearly minimal oxyphototrophic genome
 Proc. Natl. Acad. Sci. USA. 2003. 100:10020-10025.

Fourrier L., Brooks P. and Malinge J.M.
 “Binding discrimination of MutS to a set of lesions and compound lesions (base damage and mismatch) reveals its potential role as a cisplatin-damaged DNA sensing protein
 J. Biol. Chem.. 2003. 278:21267-21275.

Heilig R., Eckenberg R., Petit J.L., Fonknechten N., Da Silva C., Cattolico L., Levy M., Barbe V., de Berardinis V., Ureta-Vidal A., Pelletier E., Vico V., Anthouard V., Rowen L., Madan A., Qin S., Sun H., Du H., Pepin K., Artiguenave F., Robert C., Cruaud C., Brüls T., Jaillon O., Friedlander L., Samson G., Brottier P., Cure S., Ségurens B., Aniere F., Samain S., Crespeau H., Abbasi N., Aiach N., Boscus D., Dickhoff R., Dors M., Dubois I., Friedman C., Gouyvenoux M., James R., Madan A., Mairey-Estrada B., Mangenot S., Martins N., Menard M., Oztas S., Ratcliffe A., Shaffer T., Trask B., Vacherie B., Bellemere C., Belser C., Besnard-Gonnet M., Bartol-Mavel D., Boutard M., Briez-Silla S., Combette S., Dufosse-Laurent V., Ferron C., Lechaplais C., Louesse C., Muselet D., Magdelenat G., Pateau E., Petit E., Sirvain-Trukniewicz P., Trybou A., Vega-Czarny N., Bataille E., Bluet E., Bordelais I., Dubois M., Dumont C., Guérin T., Haffray S., Hammadi R., Muanga J., Pellouin V., Robert D., Wunderle E., Gauguet G., Roy A., Sainte-Marthe L., Verdier J., Verdier-Discala C., Hillier L., Fulton L., McPherson J., Matsuda F., Wilson R., Scarpelli C., Gyapay G., Wincker P., Saurin W., Quétier F., Waterston R., Hood L. and Weissenbach J.
 “The DNA sequence and analysis of human chromosome 14
 Nature. 2003. 421:601-607.

Jaillon O., Dossat C., Eckenberg R., Eiglmeier K., Ségurens B., Aury J.M., Roth C.W., Scarpelli C., Brey P.T., Weissenbach J. and Wincker P.
 “Assessing the Drosophila melanogaster and Anopheles gambiae genome anotations using genome-wide sequence comparisons
 Genome Res.. 2003. 1595-1599.

Jetten M.S., Sliekers O., Kuypers M., Dalsgaard T., Van Niftrik L., Cirpus I., Van De Pas-Schoonen K., Lavik G., Thamdrup B., Le Paslier D., Op Den Camp H.J., Hulth S., Nielsen L.P., Abma W., Third K., Engstrom P., Kuenen J.G., Jorgensen B.B., Canfield D.E., Sinninghe Damste J.S., Revsbech N.P., Fuerst J., Weissenbach J., Wagner M., Schmidt I., Schmid M. and Strous M.
 “Anaerobic ammonium oxidation by marine and freshwater planctomycete-like bacteria
 Appl. Microbiol. Biotechnol.. 2003. 63:107-114.

Jobard F., Bouadjar B., Caux F., Hadj-Rabia S., Has C., Matsuda F., Weissenbach J., Lathrop M., Prud’homme J.F. and Fischer J.
 “Identification of mutations in a new gene encoding a FERM family protein with a pleckstrin homology domain in Kindler syndrome
 Hum. Mol. Genet.. 2003. 12:925-935.

Koszul R., Malpertuy A., Frangeul L., Bouchier C., Wincker P., Thierry A., Duthoy S., Ferris S., Hennequin C. and Dujon B.
 “The complete mitochondrial genome sequence of the pathogenic yeast Candida (Torulopsis) glabrata
 FEBS Lett.. 2003. 534:39-48.

Lefevre C., Audebert S., Jobard F., Bouadjar B., Lakhdar H., Boughdene-Stambouli O., Blanchet-Bardon C., Heilig R., Foglio M., Weissenbach J., Lathrop M., Prud’homme J.F. and Fischer J.
 “Mutations in the transporter ABCA12 are associated with lamellar ichthyosis type 2
 Hum. Mol. Genet.. 2003. 12:2369-2378.

Lutfalla G., Roest Crollius H., Stange-Thomann N., Jaillon O., Mogensen K. and Monneron D.
 “Comparative genomic analysis reveals independent expansion of a lineage-specific gene family in vertebrates: The class II cytokine receptors and their ligands in mammals and fish
 BMC Genomics. 2003. 4:29.

Roth C.W., Holm I., Graille M., Dehoux P., Rzhetsky A., Wincker P., Weissenbach J. and Brey P.T.
 “Identification of the Anopheles gambiae ATP-binding cassette transporter superfamily genes
 Mol. Cells. 2003. 15:150-158.

Silar P., Barreau C., Debuchy R., Kicka S., Turcq B., Sainsard-Chanet A., Sellem C.H., Billault A., Cattolico L., Duprat S. and Weissenbach J.
 “Characterization of the genomic organization of the region around the centromere of chomosome V of Podospora anserina by direct sequencing” -Fungal Genet. Biol.. 2003. 250-263.

Volff J.N., Bouneau L., Ozouf-Costaz C. and Fischer C.
 “Diversity of retrotransposable elements in compact pufferfish genomes
 Trends Genet. 2003. 19:674-678.

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