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Publications of 2000



Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D., Zhang Q., Chen L.X., Brandon R.C., Rogers Y.H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Nelson C.R., Miklos G.L.G., Ferrando J.F.A., Agbayani A., An H.J., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D., Butler H., Cadieu E., Cherry J.M., Dahlke C., Davies P., de Pablos B., Delcher A., Deng Z., Deslattes Mays A., Dew I., Dietz S.M., Dodson K., Doup L., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Fleischmann W., Fosler C., Gabrielian A.E., Garg N., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D., Heiman T.J., Helt G., Hernandez J.R., Houck J., Houston K.A., Howland T.J., Kalush F., Karpen G.H., Ke P., Kennison J.A., Ketchum K.A., Kimmel B., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., WoodageT., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M. and Venter J.C.
 “The genome sequence of Drosophila melanogaster
 Science, 2000. 287:2185-2195.

Artiguenave F., Wincker P., Brottier P., Duprat S., Jovelin F., Scarpelli C., Verdier J., Vico V., Weissenbach J. and Saurin W.
 “Genomic exploration of the hemiascomycetous yeasts: 2. Data generation and processing
 FEBS Lett. 2000. 487:13-16.

Blandin G., Llorente B., Malpertuy A., Wincker P., Artiguenave F. and Dujon B.
 “Genomic exploration of the hemiascomycetous yeasts: 13. Pichia angusta
 FEBS Lett. 2000. 487:76-81.

Blandin G., Ozier-Kalogeropoulos O., Wincker P., Artiguenave F. and Dujon B.
 “Genomic exploration of the hemiascomycetous yeasts: 16. Candida tropicalis
 FEBS Lett., 2000. 487:91-94.

Bolotin-Fukuhara M., Toffano-Nioche C., Artiguenave F., Duchateau-Nguyen G., Lemaire M., Marmeisse R., Montrocher R., Robert C., Termier M., Wincker P. and Wesolowski-Louvel M.
 “Genomic exploration of the hemiascomycetous yeasts: 11. Kluyveromyces lactis
 FEBS Lett., 2000. 487:66-70.

Bon E., Neuveglise C., Casaregola S., Artiguenave F., Wincker P., Aigle M. and Durrens P.
 “Genomic exploration of the hemiascomycetous yeasts: 5. Saccharomyces bayanus var. uvarum
 FEBS Lett., 2000. 487:37-41.

Bon E., Neuveglise C., Lepingle A., Wincker P., Artiguenave F., Gaillardin C. and Casaregola S.
 “Genomic exploration of the hemiascomycetous yeasts: 6. Saccharomyces exiguus
 FEBS Lett.. 2000. 487:42-46.

Bürger J., Fonknechten N., Hoeltzenbein M., Neumann L., Bratanoff E., Hazan J. and Reis A.
 “Hereditary spastic paraplegia caused by mutations in the SPG4 gene
 Eur. J. Human Genet., 2000. 8:771-776.

Casaregola S., Lepingle A., Bon E., Neuveglise C., Nguyen H., Artiguenave F., Wincker P. and Gaillardin C.
 “Genomic exploration of the hemiascomycetous yeasts: 7. Saccharomyces servazzii
 FEBS Lett. 2000. 487:47-51.

Casaregola S., Neuveglise C., Lepingle A., Bon E., Feynerol C., Artiguenave F., Wincker P. and Gaillardin C.
 “Genomic exploration of the hemiascomycetous yeasts: 17. Yarrowia lipolytica
 FEBS Lett. 2000. 487:95-100.

de Montigny J., Spehner C., Souciet J., Tekaia F., Dujon B., Wincker P., Artiguenave F. and Potier S.
 “Genomic exploration of the hemiascomycetous yeasts: 15. Pichia sorbitophila
 FEBS Lett. 2000. 487:87-90.

de Montigny J., Straub M., Potier S., Tekaia F., Dujon B., Wincker P. , Artiguenave F. and Souciet J.
 “Genomic exploration of the hemiascomycetous yeasts: 8. Zygosaccharomyces rouxii (1)
 FEBS Lett. 2000. 487:52-55.

Escary J.L., Bottius E., Prince N., Reyes C., Fiawoumo Y., Caloustian C., Brüls T., Fujiyama A., Cooper R.S., Adeyemo A.A., Lathrop G.M., Weissenbach J., Gyapay G., Foglio M. and Beckmann J.S.
 “A first high-density map of 981 biallelic markers on human chromosome 14
 Genomics. 2000. 70:153-164.

Fischer C., Ozouf-Costaz C., Roest-Crollius H., Da Silva C., Jaillon O., Bouneau L., Bonillo C., Weissenbach J. and Bernot A.
 “Karyotype and chromosome location of characteristic tandem repeats in the pufferfish Tetraodon nigroviridis
 Cytogenet. 2000. Cell Genet. 88:50-55.

Fischer J., Faure A., Bouadjar B., Blanchet-Bardon C., Karaduman A., Thomas I., Emre S., Cure S., Özgüc M., Weissenbach J. and Prud’homme J.F.
 “Two new loci for autosomal recessive ichthyosis on chromosomes 3p21 and 19p12-q12 and evidence for further genetic heterogeneity
 Am. J. Hum. Genet. 2000. 66:904-913.

Fonknechten N., Mavel D., Byrne P., Davoine C.S., Cruaud C., Boentsch D., Samson D., Coutinho P., Hutchinson M., McMonagle P., Burgunder J.M., Tartaglione A., Heinzlef O., Feki I., Deufel T., Parfrey N., Brice A., Fontaine B., Prud’homme J.F., Weissenbach J., Dürr A. and Hazan J.
 “Spectrum of SPG4 mutations in autosomal dominant spastic paraplegia
 Hum. Mol. Genet. 2000. 9:637-644.

Fontaine B., Davoine C.S., Durr A., Paternotte C., Feki I., Weissenbach J., Hazan J. and Brice A.
 “A new locus for autosomal dominant pure spastic paraplegia, on chromosome 2q24-q34
 Am. J. Hum. Genet. 2000. 66:702-7.

Gaillardin C., Duchateau-Nguyen G., Tekaia F., Llorente B., Casaregola S., Toffano-Nioche C., Aigle M., Artiguenave F., Blandin G., Bolotin-Fukuhara M., Bon E., Brottier P., de Montigny J., Dujon B., Durrens P., Lepingle A., Malpertuy A., Neuveglise C., Ozier-Kalogeropoulos O., Potier S., Saurin W., Termier M., Wesolowski-Louvel M., Wincker P., Souciet J. and Weissenbach J.
 “Genomic exploration of the hemiascomycetous yeasts: 21. Comparative functional classification of genes
 FEBS Lett. 2000. 487:134-149.

Garcia V., Salanoubat M., Choisne N. and Tissier A.
 “An ATM homologue from Arabidopsis thaliana: complete genomic organisation and expression analysis
 Nucl. Acids Res. 2000. 28:1692-9.

Lepingle A., Casaregola S., Neuveglise C., Bon E., Nguyen H., Artiguenave F., Wincker P. and Gaillardin C.
 “Genomic exploration of the hemiascomycetous yeasts: 14. Debaryomyces hansenii var. hansenii FEBS Lett. 2000. 487:82-86.

Llorente B., Durrens P., Malpertuy A., Aigle M., Artiguenave F., Blandin G., Bolotin-Fukuhara M., Bon E., Brottier P., Casaregola S., Dujon B., de Montigny J., Lepingle A., Neuveglise C., Ozier-Kalogeropoulos O., Potier S., Saurin W., Tekaia F., Toffano-Nioche C., Wesolowski-Louvel M., Wincker P., Weissenbach J., Souciet J. and Gaillardin C.
  “Genomic exploration of the hemiascomycetous yeasts: 20. Evolution of gene redundancy compared to Saccharomyces cerevisiae
  FEBS Lett. 2000. 487:122-133.

Llorente B., Malpertuy A., Blandin G., Artiguenave F., Wincker P. and Dujon B.
 “Genomic exploration of the hemiascomycetous yeasts: 12. Kluyveromyces marxianus var. marxianus
 FEBS Lett. 2000. 487:71-75.

Llorente B., Malpertuy A., Neuveglise C., de Montigny J., Aigle M., Artiguenave F., Blandin G., Bolotin-Fukuhara M., Bon E., Brottier P., Casaregola S., Durrens P., Gaillardin C., Lepingle A., Ozier-Kalogeropoulos O., Potier S., Saurin W., Tekaia F., Toffano-Nioche C., Wesolowski-Louvel M., Wincker P., Weissenbach J., Souciet J. and Dujon B.
 “Genomic exploration of the hemiascomycetous yeasts: 18. Comparative analysis of chromosome maps and synteny with Saccharomyces cerevisiae
 FEBS Lett. 2000. 487:101-112.

Malpertuy A., Llorente B., Blandin G., Artiguenave F., Wincker P. and Dujon B.
 “Genomic exploration of the hemiascomycetous yeasts: 10. Kluyveromyces thermotolerans
 FEBS Lett. 2000. 487:61-65.

Malpertuy A., Tekaia F., Casaregola S., Aigle M., Artiguenave F., Blandin G., Bolotin-Fukuhara M., Bon E., Brottier P., de Montigny J., Durrens P., Gaillardin C., Lepingle A., Llorente B., Neuveglise C., Ozier-Kalogeropoulos O., Potier S., Saurin W., Toffano-Nioche C., Wesolowski-Louvel M., Wincker P., Weissenbach J., Souciet J. and Dujon B.
 “Genomic exploration of the hemiascomycetous yeasts: 19. Ascomycetes-specific genes
 FEBS Lett. 2000. 487:113-121.

Myllykallio H., Lopez P., Lopez-Garcia P., Heilig R., Saurin W., Zivanovic Y., Philippe H. and Forterre P.
 “Bacterial mode of replication with eukaryotic-like machinery in a hyperthermophilic archaeon
 Science. 2000. 288:2212-5.

Neuveglise C., Bon E., Lepingle A., Wincker P., Artiguenave F., Gaillardin C. and Casaregola S.
 “Genomic exploration of the hemiascomycetous yeasts: 9. Saccharomyces kluyveri
 FEBS Lett. 2000. 487:56-60.

Nicole S., Davoine C.S., Topaloglu H., Cattolico L., Barral D., Beighton P., Hamida C.B., Hammouda H., Cruaud C., White P.S., Samson D., Urtizberea J.A., Lehmann-Horn F., Weissenbach J., Hentati F. and Fontaine B.
  “Perlecan, the major proteoglycan of basement membranes, is altered in patients with Schwartz-Jampel syndrome (chondrodystrophic myotonia)
  Nature Genet. 2000. 26:480-483.

Ogata H., Audic S., Barbe V., Artiguenave F., Fournier P.E., Raoult D. and Claverie J.M.
 “Selfish DNA in protein-coding genes of rickettsia
 Science. 2000. 290:347-50.

Roest Crollius H., Jaillon O., Bernot A., Da Silva C., Bouneau L., Fischer C., Fizames C., Wincker P., Brottier P., Quétier F., Saurin W. and Weissenbach J.
 “Estimate of gene number provided by genome-wide analysis using Tetraodon nigroviridis DNA sequence
 Nature Genet. 2000. 25:235-238.

Roest Crollius H., Jaillon O., Da Silva C., Ozouf-Costaz C., Fizames C., Fischer C., Bouneau L., Billault A., Quétier F., Saurin W., Bernot A. and Weissenbach J.
 “Characterization and repeat analysis of the compact genome of the freshwater pufferfish Tetraodon nigroviridis
 Genome Res. 2000. 10:939-49.

Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B., Valle G., Blocker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P., Cattolico L., Weissenbach J., Saurin W., Quétier F., Schafer M., Muller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P., Nyakatura G., Vezzi A., D’Angelo M., Pallavicini A., Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Lohnert T.H., Nordsiek G., Reichelt J., Scharfe M., Schon O., Bargues M., Terol J., Climent J., Navarro P., Collado C., Perez- Perez A., Ottenwalder B., Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D., de Haan M., Maarse A.C., Alcaraz J.P., Cottet A., Casacuberta E., Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G., Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.W., Mayer K.F., Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M., Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B., Maiti R., Wu D. and Peterson J.
 “Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana
 Nature. 2000. 408:820-822.

Saunier S., Calado J., Benessy F., Silberman F., Heilig R., Weissenbach J. and Antignac C.
 “Characterization of the NPHP1 locus: mechanism involved in deletions in familial juvenile nephronophthisis
 Am. J. Hum. Genet. 2000. 66:778-789.

Scimeca J.C., Franchi A., Trojani C., Parrinello H., Grosgeorge J., Robert C., Jaillon O., Poirier C., Gaudray P. and Carle G.F.
 “The gene encoding the mouse homologue of the human osteoclast-specific 116-kDa V-ATPase subunit bears a deletion in osteosclerotic (oc/oc) mutants
 Bone. 2000. 26:207-13.

Souciet J., Aigle M., Artiguenave F., Blandin G., Bolotin-Fukuhara M., Bon E., Brottier P., Casaregola S., de Montigny J., Dujon B., Durrens P., Gaillardin C., Lepingle A., Llorente B., Malpertuy A., Neuveglise C., Ozier-Kalogeropoulos O., Potier S., Saurin W., Tekaia F., Toffano-Nioche C., Wesolowski-Louvel M., Wincker P. and Weissenbach J.
 “Genomic exploration of the hemiascomycetous yeasts: 1. A set of yeast species for molecular evolution studies (1)
 FEBS Lett. 2000. 487:3-12.

The Arabidopsis Genome Initiative (Salanoubat M., Choisne N., Artiguenave F., Weissenbach J. and Quétier F. for Genoscope)
 “Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
 Nature. 2000. 408:796-815.

Tiret L., Kessler J.L., Bentolila S., Faure S., Bach J.M., Weissenbach J. and Panthier J.J.
 “Assignation of highly polymorphic markers on a canine purebred pedigreeMamm. Genome. 2000. 11:703-5.

Tullio-Pelet A., Salomon R., Hadj-Rabia S., Mugnier C., de Laet M.H., Chaouachi B., Bakiri F., Brottier P., Cattolico L., Penet C., Begeot M., Naville D., Nicolino M., Chaussain J.L., Weissenbach J., Munnich A. and Lyonnet S.
 “Mutant WD-repeat protein in triple-A syndrome
 Nature Genet. 26:332-335.

Weissenbach J. and Salanoubat M.
 “Séquence des génomes : le feu d’artifice
 Med. Sci. 2000. 16:10-16.

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