Publications LMP

2009

Fonknechten N, Perret A, Perchat N, Tricot S, Lechaplais C, Vallenet D, Vergne C, Zaparucha A, Le Paslier D, Weissenbach J, Salanoubat M. A conserved gene cluster rules anaerobic oxidative degradation of L-ornithine. J Bacteriol. 2009 Feb 27. [Epub ahead of print]

Loy A, Duller S, Baranyi C, Mussmann M, Ott J, Sharon I, Béjà O, Le Paslier D, Dahl C, Wagner M. Reverse dissimilatory sulfite reductase as phylogenetic marker for a subgroup of sulfur-oxidizing prokaryotes. Environ Microbiol. 2009 Feb ;11(2):289-99. Epub 2008 Sep 26.

Rivière D, Desvignes V, Pelletier E, Chaussonnerie S, Guermazi S, Weissenbach J, Li T, Camacho P, Sghir A. Towards the definition of a core of microorganisms involved in anaerobic digestion of sludge. ISME J. 2009 Feb 26. [Epub ahead of print]

2008

Zrafi-Nouira I, Guermazi S, Chouari R, Safi NM, Pelletier E, Bakhrouf A, Saidane-Mosbahi D, Sghir A. Molecular diversity analysis and bacterial population dynamics of an adapted seawater microbiota during the degradation of Tunisian zarzatine oil. Biodegradation. 2008 Dec 4.

Li T, Mazéas L, Sghir A, Leblon G, Bouchez T. Insights into networks of functional microbes catalysing methanization of cellulose under mesophilic conditions. Environ Microbiol. 2008 Dec 1.

Maixner F, Wagner M, Lücker S, Pelletier E, Schmitz-Esser S, Hace K, Spieck E, Konrat R, Le Paslier D, Daims H. Environmental genomics reveals a functional chlorite dismutase in the nitrite-oxidizing bacterium « Candidatus Nitrospira defluvii ». Environ Microbiol. 2008 Nov ;10(11):3043-56. Epub 2008 May 5.

Ganesan A, Chaussonnerie S, Tarrade A, Dauga C, Bouchez T, Pelletier E, Le Paslier D, Sghir A. Cloacibacillus evryensis gen. nov., sp. nov., a novel asaccharolytic, mesophilic, amino-acid-degrading bacterium within the phylum ’Synergistetes’, isolated from an anaerobic sludge digester. Int J Syst Evol Microbiol. 2008 Sep ;58(Pt 9):2003-12.

Guermazi S, Daegelen P, Dauga C, Rivière D, Bouchez T, Godon JJ, Gyapay G, Sghir A, Pelletier E, Weissenbach J, Le Paslier D. Discovery and characterization of a new bacterial candidate division by an anaerobic sludge digester metagenomic approach. Environ Microbiol. 2008 Aug ;10(8):2111-23. Epub 2008 May 6.

Baati H, Guermazi S, Amdouni R, Gharsallah N, Sghir A, Ammar E. Prokaryotic diversity of a Tunisian multipond solar saltern. Extremophiles. 2008 Jul ;12(4):505-18. Epub 2008 Mar 29.

Pelletier E, Kreimeyer A, Bocs S, Rouy Z, Gyapay G, Chouari R, Rivière D, Ganesan A, Daegelen P, Sghir A, Cohen GN, Médigue C, Weissenbach J, Le Paslier D. « Candidatus Cloacamonas acidaminovorans » : genome sequence reconstruction provides a first glimpse of a new bacterial division. J Bacteriol. 2008 Apr ;190(7):2572-9. Epub 2008 Feb 1.

Siala M, Jaulhac B, Gdoura R, Sibilia J, Fourati H, Younes M, Baklouti S, Bargaoui N, Sellami S, Znazen A, Barthel C, Collin E, Hammami A, Sghir A. Analysis of bacterial DNA in synovial tissue of Tunisian patients with reactive and undifferentiated arthritis by broad-range PCR, cloning and sequencing. Arthritis Res Ther. 2008 ;10(2) :R40. Epub 2008 Apr 14.

2006

Strous M, Pelletier E, Mangenot S, Rattei T, Lehner A, Taylor MW, Horn M, Daims H, Bartol-Mavel D, Wincker P, Barbe V, Fonknechten N, Vallenet D, Segurens B, Schenowitz-Truong C, Médigue C, Collingro A, Snel B, Dutilh BE, Op den Camp HJ, van der Drift C, Cirpus I, van de Pas-Schoonen KT, Harhangi HR, van Niftrik L, Schmid M, Keltjens J, van de Vossenberg J, Kartal B, Meier H, Frishman D, Huynen MA, Mewes HW, Weissenbach J, Jetten MS, Wagner M, Le Paslier D. Deciphering the evolution and metabolism of an anammox bacterium from a community genome. Nature. 2006 Apr 6 ;440(7085):790-4.

2005

Cirpus IE, de Been M, den Camp HJ, Strous M, Le Paslier D, Kuenen GJ, Jetten MS. A new soluble 10kDa monoheme cytochrome c-552 from the anammox bacterium « Candidatus Kuenenia stuttgartiensis ». FEMS Microbiol Lett. 2005 Nov 15 ;252(2):273-8. Epub 2005 Sep 22.

Chouari R, Le Paslier D, Daegelen P, Ginestet P, Weissenbach J, Sghir A. Novel predominant archaeal and bacterial groups revealed by molecular analysis of an anaerobic sludge digester. Environ Microbiol. 2005 Aug ;7(8):1104-15.

Chouari R, Le Paslier D, Dauga C, Daegelen P, Weissenbach J, Sghir A. Novel major bacterial candidate division within a municipal anaerobic sludge digester. Appl Environ Microbiol. 2005 Apr ;71(4):2145-53.

Dauga C, Doré J, Sghir A. Expanding the known diversity and environmental distribution of cultured and uncultured bacteria. Med Sci (Paris). 2005 Mar ;21(3):290-6. Review. French.

2004

Penet S, Marchal R, Sghir A, Monot F. Biodegradation of hydrocarbon cuts used for diesel oil formulation. Appl Microbiol Biotechnol. 2004 Nov ;66(1):40-7. Epub 2004 May 29.

2003

Chouari R, Le Paslier D, Daegelen P, Ginestet P, Weissenbach J, Sghir A. Molecular evidence for novel planctomycete diversity in a municipal wastewater treatment plant. Appl Environ Microbiol. 2003 Dec ;69(12):7354-63.

Jetten MS, Sliekers O, Kuypers M, Dalsgaard T, van Niftrik L, Cirpus I, van de Pas-Schoonen K, Lavik G, Thamdrup B, Le Paslier D, Op den Camp HJ, Hulth S, Nielsen LP, Abma W, Third K, Engström P, Kuenen JG, Jørgensen BB, Canfield DE, Sinninghe Damsté JS, Revsbech NP, Fuerst J, Weissenbach J, Wagner M, Schmidt I, Schmid M, Strous M. Anaerobic ammonium oxidation by marine and freshwater planctomycete-like bacteria. Appl Microbiol Biotechnol. 2003 Dec ;63(2):107-14. Epub 2003 Sep 4. Review.