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Pseudomonas L48

Whole genome shotgun

Project: Collaborative
State of the project: Completed



Collaborations :
Centre de Génétique Moléculaire
CNRS UPR 2167
Avenue de la Terrasse
Gif/Yvette (France)
Access to :
The complete sequence of Pseudomonas entomophila L48

Genoscope is undertaking the sequencing of the bacterium Pseudomonas L48, a pathogenic parasite of Drosophila melanogaster.

The size of this genome of this bacterium is estimated at about 6 Mb. The genome will be sequenced at 6X depth, using three libraries: about 15,000 inserts of 3 kb cloned in a pcdna2.1 vector (small copy number), about 3,800 inserts of 10 kb cloned in a pCNS vector (high copy number), and close to 4,600 inserts of 20 kb cloned in a miniBAC (pBBC) vector. A manual finishing step will be carried out at Genoscope.

Contacts:
Patrick Wincker (Genoscope) - Claudine Médigue (Genoscope) - Frédéric Boccard (CNRS)

Last update on 5 June 2009

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