Paramecium Genome Browser

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scaffold_106:5451..15450
region of scaffold_106 from 5451 to 15450
Q99KN2_MOUSE
matches with Q99KN2_MOUSE protein from Uniprot

Assembly summary (download)


Number
N50 length (kb)
Size (kb)
Reads
1,240,814
-
-
Contigs
12,985
117.7
88,427
Scaffolds
697
413
71,881



Paramecium tetraurelia

Paramecium tetraurelia genome Paramecium tetraurelia (photo J. Beisson)
(photo J. Beisson)


Annotation summary (download)

Annotated genes
39,642
Annotated transcripts
39,642
Average number of coding exons per gene
3.28
Average number of UTR exons per gene
0.25
Average gene size (bp)
1,434
Average CDS size (bp)
1,362
Average exon size (bp)
419

On the initiative of a group from the Centre de Genetic Moleculaire, scientists from the CNRS (French National Research Organization) and Genoscope, the French National DNA Sequencing Centre, have just decoded the genome of Paramecium, a unicellular organism of considerable interest to evolutionary biologists. Thanks to the discovery that there were three genome duplications at different time scales, they were able to evaluate directly the consequences of this phenomenon on the evolution of species. These results will appear in the journal Nature of November 9, 2006 (online on November 1st).

Reference : Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia. Jean-Marc Aury et al, Nature, November 9, 2006.