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Micheck Results



RefSeq 'COMMENT' line:  Reviewed RefSeq  "This record has been curated by NCBI staff." (collaborative automatic computation methods followed by manually curated reannotation)
Provisional RefSeq  "This record has not yet been subject to final NCBI review." (collaborative automatic computation methods)
Provisional RefSeq  "This record has not yet been subject to final NCBI review."
 
Selected Genomes
Organism Origin of file* Origin of file* Origin of file*
Pyrococcus horikoshiiGenBank RefSeq EMBL
Salmonella typhimurium LT2GenBank RefSeq EMBL
Pyrococcus abyssiGenBank RefSeq EMBL
Haemophilus influenzaeGenBank RefSeq EMBL
Lactococcus lactis GenBank RefSeq EMBL
Pyrococcus furiosusGenBank RefSeq EMBL
Oceanobacillus iheyensisGenBank RefSeq EMBL
Aeropyrum pernixGenBank RefSeq EMBL
Corynebacterium glutamicumGenBank RefSeq EMBL
Shewanella oneidensisGenBank RefSeq EMBL
Thermoplasma volcaniumGenBank RefSeq EMBL
Buchnera sp.GenBank RefSeq EMBL
Recently Released Genomes
Organism Origin of file* Release Date
Xanthomonas oryzae pv. oryzae KAXCC10331RefSeq05-FEB-2005
Wolbachia sp. TRS (Brugia malayi)RefSeq05-FEB-2005
Ehrlichia ruminantium WelgevondenRefSeq05-FEB-2005
Lactobacillus acidophilus NCFM (ATCC 700396)RefSeq02-FEB-2005
Thermococcus kodakaraensis KOD1RefSeq02-FEB-2005
Staphylococcus epidermidis RP62ARefSeq27-JAN-2005
Gluconobacter oxydans 621HRefSeq26-JAN-2005
Dehalococcoides ethenogenes 195RefSeq13-JAN-2005


*Origin of files:


Results Summary For Reviewed Genomes


Common CDS Unique CDS No Status CDS


Common CDS


Genome Size (Mb) Databank CDS AMIGene CDS Common CDS


Genbank RefSeq
(Reviewed)		 EMBL
(Reviewed)
Genbank RefSeq
(Reviewed)		 EMBL
(Reviewed)
Aeropyrum pernix 1,67 2695 1843 2694 1717 1565 1569 1565
Buchnera sp. 0,64 572 572 564 580 557 556 561
Corynebacterium glutamicum 3,31 3099 2993 3099 2993 2906 2905 2907
Escherichia coli K12 4,64 4256 4256 4254 4280 4121 4121 4129
Haemophilus influenzae 1,83 1739 1716 1709 1770 1675 1627 1681
Lactococcus lactis 2,37 2308 2345 2266 2365 2239 2261 2237
Oceanobacillus iheyensis 3,63 3497 3502 3496 3458 3406 3392 3408
Pyrococcus abyssi 1,77 1785 1898 1785 1892 1770 1862 1770
Pyrococcus furiosus 1,91 2070 2130 2069 2090 2011 2053 2011
Pyrococcus horikoshi 1,74 2072 1959 2064 1866 1677 1833 1681
Salmonella typhimurium LT2 4,86 4536 4504 4453 4459 4267 4275 4314
Shewanella oneidensis 4,97 4757 4438 4630 4441 4114 4127 4144
Thermoplasma volcanium 1,58 1526 1506 1526 1571 1462 1462 1462



Unique CDS


Genome Unique Databank CDS Unique AMIGene CDS

Genbank RefSeq
(Reviewed)		 EMBL
(Reviewed)		 Genbank RefSeq
(Reviewed)		 EMBL
(Reviewed)
Aeropyrum pernix 941 186 941 18 35 18
Buchnera sp. 0 0 0 0 0 10
Corynebacterium glutamicum 65 14 65 15 5 15
Escherichia coli K12 6 1 7 14 14 18
Haemophilus influenzae 5 0 0 2 4 47
Lactococcus lactis 10 11 7 0 14 45
Oceanobacillus iheyensis 18 18 18 2 14 2
Pyrococcus abyssi 4 12 0 6 2 6
Pyrococcus furiosus 5 9 5 6 2 6
Pyrococcus horikoshi 341 91 339 7 0 7
Salmonella typhimurium LT2 9 8 1 12 7 41
Shewanella oneidensis 216 21 0 20 7 150
Thermoplasma volcanium 27 1 1 18 7 18



No Status CDS


Genome Unique Databank CDS Unique AMIGene CDS

Genbank RefSeq
(Reviewed)		 EMBL
(Reviewed)		 Genbank RefSeq
(Reviewed)		 EMBL
(Reviewed)
Aeropyrum pernix 189 88 188 134 113 134
Buchnera sp. 15 16 3 23 24 9
Corynebacterium glutamicum 128 74 127 72 83 71
Escherichia coli K12 129 134 118 145 145 133
Haemophilus influenzae 59 89 28 93 139 42
Lactococcus lactis 59 72 22 121 88 83
Oceanobacillus iheyensis 73 92 70 50 52 48
Pyrococcus abyssi 11 24 15 116 28 116
Pyrococcus furiosus 54 68 53 73 35 73
Pyrococcus horikoshi 54 35 44 182 33 178
Salmonella typhimurium LT2 260 221 131 180 177 104
Shewanella oneidensis 427 290 486 307 307 147
Thermoplasma volcanium 37 43 63 91 102 91


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Last updated: 01/09/2005