Sequence |
Label |
Type |
Gene |
Begin |
End |
Length |
Frame |
Product |
Matrix |
Evidence |
AMIGene Status |
Mutation |
GC Content |
GC3 Content |
CAI |
Mw (Da) |
pI |
History |
|
ACIADrRNA16S_1 |
rRNA |
|
18416 |
19945 |
1530 |
+1 |
16S |
|
validated/Curated |
no |
no |
|
|
|
|
|
|
|
ACIADtRNAIle_1 |
tRNA |
|
20007 |
20083 |
77 |
+1 |
Ile tRNA |
|
validated/Curated |
no |
no |
|
|
|
|
|
|
|
ACIADtRNAAla_2 |
tRNA |
|
20120 |
20195 |
76 |
+1 |
Ala tRNA |
|
validated/Curated |
no |
no |
|
|
|
|
|
|
|
ACIADrRNA23S_2 |
rRNA |
|
20539 |
23437 |
2899 |
+1 |
23S |
|
validated/Curated |
no |
no |
|
|
|
|
|
|
|
ACIADrRNA5S_3 |
rRNA |
|
23623 |
23738 |
116 |
+1 |
5S |
|
validated/Curated |
no |
no |
|
|
|
|
|
|
|
ACIAD0017 |
CDS |
|
23916 |
24530 |
615 |
+3 |
putative glutathione S-transferase |
3 |
validated/Curated |
no |
no |
0.3886 |
0.3024 |
0.62 |
23351.84 |
5.70 |
|
|
ACIAD0018 |
CDS |
|
24584 |
24895 |
312 |
+2 |
conserved hypothetical protein |
3 |
validated/Curated |
no |
no |
0.4199 |
0.3269 |
0.59 |
11252.02 |
4.24 |
|
|
ACIAD0019 |
CDS |
|
25116 |
25658 |
543 |
-3 |
putative NAD(P)H-dependent FMN reductase |
2 |
validated/Curated |
no |
no |
0.3849 |
0.3039 |
0.61 |
20462.63 |
8.05 |
|
|
ACIAD0020 |
CDS |
fkpB |
25757 |
26239 |
483 |
-1 |
FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) |
2 |
validated/Curated |
no |
no |
0.4265 |
0.3602 |
0.65 |
17817.50 |
4.91 |
|
|
ACIAD0021 |
CDS |
lspA |
26232 |
26771 |
540 |
-3 |
prolipoprotein signal peptidase (Signal peptidase II.) |
1 |
validated/Curated |
no |
no |
0.4019 |
0.3722 |
0.62 |
20369.24 |
7.27 |
|
|
ACIAD0022 |
CDS |
ileS |
26764 |
29601 |
2838 |
-2 |
isoleucyl-tRNA synthetase |
1 |
validated/Curated |
no |
no |
0.4482 |
0.3911 |
0.68 |
106141.25 |
5.43 |
|
|
ACIAD0023 |
CDS |
ribF |
29666 |
30667 |
1002 |
-1 |
bifunctional protein [Includes: riboflavin kinase (Flavokinase); FMN adenylyltransferase (FAD pyrophosphorylase) (FAD synthetase)] |
1 |
validated/Curated |
no |
no |
0.4401 |
0.3772 |
0.55 |
37553.63 |
8.37 |
|
|
ACIAD0024 |
CDS |
|
30876 |
32000 |
1125 |
+3 |
putative malic acid transport protein |
1 |
validated/Curated |
no |
no |
0.4320 |
0.3840 |
0.55 |
41419.74 |
8.53 |
|
|
ACIAD0025 |
CDS |
rutD |
32045 |
32845 |
801 |
+2 |
Putative carbamate hydrolase RutD (Pyrimidine utilization protein D) |
1 |
validated/Curated |
no |
no |
0.4345 |
0.4120 |
0.54 |
30159.46 |
6.36 |
|
|
ACIAD0026 |
CDS |
rutR |
32918 |
33535 |
618 |
-1 |
DNA-binding transcriptional regulator of the alternative pyrimidine degradation pathway (Rut operon repressor) |
3 |
validated/Curated |
no |
no |
0.4126 |
0.3981 |
0.57 |
23513.54 |
8.91 |
|
|
ACIAD0027 |
CDS |
rutA |
33988 |
35097 |
1110 |
+1 |
Putative Pyrimidine monooxygenase rutA (Pyrimidine utilization protein A) |
1 |
validated/Curated |
no |
no |
0.4450 |
0.4027 |
0.59 |
40996.82 |
4.78 |
|
|
ACIAD0028 |
CDS |
rutB |
35094 |
35831 |
738 |
+3 |
Putative ureidoacrylate amidohydrolase RutB (Pyrimidine utilization protein B) |
1 |
validated/Curated |
no |
no |
0.4350 |
0.3537 |
0.59 |
27042.61 |
5.85 |
|
|
ACIAD0029 |
CDS |
rutC |
35844 |
36224 |
381 |
+3 |
putative 3-aminoacrylate deaminase RutC (Pyrimidine utilization protein C) |
1 |
validated/Curated |
no |
no |
0.4646 |
0.4016 |
0.58 |
13840.28 |
5.02 |
|
|
ACIAD0030 |
CDS |
rutF |
36303 |
36869 |
567 |
+3 |
putative FMN reductase (NADH) RutF (Pyrimidine utilization protein F) |
1 |
validated/Curated |
no |
no |
0.4497 |
0.3915 |
0.53 |
20552.63 |
6.76 |
|
|
ACIAD0031 |
CDS |
rutG |
36899 |
38263 |
1365 |
+2 |
Putative pyrimidine permease rutG (Pyrimidine utilization protein G) |
1 |
validated/Curated |
no |
no |
0.4645 |
0.4132 |
0.54 |
47433.04 |
8.82 |
|
|
ACIAD0032 |
CDS |
|
38279 |
39151 |
873 |
+2 |
putative hydroxyacid dehydrogenase/reductase |
1 |
validated/Curated |
no |
no |
0.4708 |
0.4021 |
0.57 |
31116.54 |
5.80 |
|
Sequence |
Id |
Begin |
End |
Comments |
|
RPTR1412651 |
17973 |
23828 |
9 repeats |